Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:V46:V21
Extra
PDB:
ATOM 1 O3' G A 45 -78.761 119.298 116.878 1.00 68.03 O
ATOM 2 P G A 46 -79.618 120.197 117.909 1.00 67.64 P
ATOM 3 OP1 G A 46 -80.547 119.272 118.608 1.00114.20 O
ATOM 4 OP2 G A 46 -80.165 121.383 117.200 1.00114.20 O
ATOM 5 O5' G A 46 -78.536 120.710 118.963 1.00136.79 O
ATOM 6 C5' G A 46 -77.635 119.779 119.599 1.00136.79 C
ATOM 7 C4' G A 46 -76.622 120.504 120.467 1.00136.79 C
ATOM 8 O4' G A 46 -75.853 121.426 119.658 1.00136.79 O
ATOM 9 C3' G A 46 -77.155 121.345 121.619 1.00136.79 C
ATOM 10 O3' G A 46 -77.378 120.534 122.765 1.00136.79 O
ATOM 11 C2' G A 46 -76.024 122.341 121.858 1.00136.79 C
ATOM 12 O2' G A 46 -74.989 121.819 122.672 1.00136.79 O
ATOM 13 C1' G A 46 -75.476 122.537 120.444 1.00136.79 C
ATOM 14 N9 G A 46 -75.920 123.750 119.766 1.00 50.78 N
ATOM 15 C8 G A 46 -77.208 124.190 119.553 1.00 50.78 C
ATOM 16 N7 G A 46 -77.258 125.319 118.895 1.00 50.78 N
ATOM 17 C5 G A 46 -75.926 125.639 118.663 1.00 50.78 C
ATOM 18 C6 G A 46 -75.340 126.755 117.992 1.00 50.78 C
ATOM 19 O6 G A 46 -75.897 127.707 117.430 1.00 50.78 O
ATOM 20 N1 G A 46 -73.953 126.685 118.012 1.00 50.78 N
ATOM 21 C2 G A 46 -73.217 125.672 118.591 1.00 50.78 C
ATOM 22 N2 G A 46 -71.880 125.782 118.518 1.00 50.78 N
ATOM 23 N3 G A 46 -73.747 124.631 119.201 1.00 50.78 N
ATOM 24 C4 G A 46 -75.093 124.681 119.202 1.00 50.78 C
ATOM 25 P U A 47 -78.875 120.294 123.289 1.00165.88 P
ATOM 26 OP1 U A 47 -78.780 119.275 124.362 1.00165.88 O
ATOM 27 OP2 U A 47 -79.757 120.045 122.122 1.00165.88 O
ATOM 28 O5' U A 47 -79.289 121.691 123.931 1.00197.67 O
TER
ATOM 1 O3' U B 20 -78.370 135.651 117.796 1.00131.94 O
ATOM 2 P A B 21 -78.559 134.115 118.250 1.00157.49 P
ATOM 3 OP1 A B 21 -78.901 133.347 117.026 1.00 75.50 O
ATOM 4 OP2 A B 21 -79.455 134.026 119.432 1.00 75.50 O
ATOM 5 O5' A B 21 -77.102 133.692 118.727 1.00106.16 O
ATOM 6 C5' A B 21 -76.211 133.009 117.837 1.00106.16 C
ATOM 7 C4' A B 21 -74.831 132.920 118.437 1.00106.16 C
ATOM 8 O4' A B 21 -74.915 132.482 119.814 1.00106.16 O
ATOM 9 C3' A B 21 -73.951 131.891 117.753 1.00106.16 C
ATOM 10 O3' A B 21 -73.308 132.451 116.632 1.00106.16 O
ATOM 11 C2' A B 21 -72.980 131.479 118.848 1.00106.16 C
ATOM 12 O2' A B 21 -71.897 132.378 118.984 1.00106.16 O
ATOM 13 C1' A B 21 -73.870 131.567 120.088 1.00106.16 C
ATOM 14 N9 A B 21 -74.477 130.295 120.486 1.00 27.14 N
ATOM 15 C8 A B 21 -75.815 129.988 120.526 1.00 27.14 C
ATOM 16 N7 A B 21 -76.069 128.798 121.010 1.00 27.14 N
ATOM 17 C5 A B 21 -74.815 128.276 121.287 1.00 27.14 C
ATOM 18 C6 A B 21 -74.407 127.053 121.838 1.00 27.14 C
ATOM 19 N6 A B 21 -75.253 126.107 122.242 1.00 27.14 N
ATOM 20 N1 A B 21 -73.082 126.836 121.972 1.00 27.14 N
ATOM 21 C2 A B 21 -72.232 127.799 121.585 1.00 27.14 C
ATOM 22 N3 A B 21 -72.496 128.997 121.065 1.00 27.14 N
ATOM 23 C4 A B 21 -73.823 129.176 120.944 1.00 27.14 C
ATOM 24 P G B 22 -73.721 131.961 115.166 1.00 69.53 P
ATOM 25 OP1 G B 22 -74.771 132.900 114.690 1.00 64.55 O
ATOM 26 OP2 G B 22 -73.994 130.501 115.191 1.00 64.55 O
ATOM 27 O5' G B 22 -72.401 132.214 114.321 1.00 34.74 O
TER
ATOM 2 P G A 46 -79.618 120.197 117.909 1.00 67.64 P
ATOM 3 OP1 G A 46 -80.547 119.272 118.608 1.00114.20 O
ATOM 4 OP2 G A 46 -80.165 121.383 117.200 1.00114.20 O
ATOM 5 O5' G A 46 -78.536 120.710 118.963 1.00136.79 O
ATOM 6 C5' G A 46 -77.635 119.779 119.599 1.00136.79 C
ATOM 7 C4' G A 46 -76.622 120.504 120.467 1.00136.79 C
ATOM 8 O4' G A 46 -75.853 121.426 119.658 1.00136.79 O
ATOM 9 C3' G A 46 -77.155 121.345 121.619 1.00136.79 C
ATOM 10 O3' G A 46 -77.378 120.534 122.765 1.00136.79 O
ATOM 11 C2' G A 46 -76.024 122.341 121.858 1.00136.79 C
ATOM 12 O2' G A 46 -74.989 121.819 122.672 1.00136.79 O
ATOM 13 C1' G A 46 -75.476 122.537 120.444 1.00136.79 C
ATOM 14 N9 G A 46 -75.920 123.750 119.766 1.00 50.78 N
ATOM 15 C8 G A 46 -77.208 124.190 119.553 1.00 50.78 C
ATOM 16 N7 G A 46 -77.258 125.319 118.895 1.00 50.78 N
ATOM 17 C5 G A 46 -75.926 125.639 118.663 1.00 50.78 C
ATOM 18 C6 G A 46 -75.340 126.755 117.992 1.00 50.78 C
ATOM 19 O6 G A 46 -75.897 127.707 117.430 1.00 50.78 O
ATOM 20 N1 G A 46 -73.953 126.685 118.012 1.00 50.78 N
ATOM 21 C2 G A 46 -73.217 125.672 118.591 1.00 50.78 C
ATOM 22 N2 G A 46 -71.880 125.782 118.518 1.00 50.78 N
ATOM 23 N3 G A 46 -73.747 124.631 119.201 1.00 50.78 N
ATOM 24 C4 G A 46 -75.093 124.681 119.202 1.00 50.78 C
ATOM 25 P U A 47 -78.875 120.294 123.289 1.00165.88 P
ATOM 26 OP1 U A 47 -78.780 119.275 124.362 1.00165.88 O
ATOM 27 OP2 U A 47 -79.757 120.045 122.122 1.00165.88 O
ATOM 28 O5' U A 47 -79.289 121.691 123.931 1.00197.67 O
TER
ATOM 1 O3' U B 20 -78.370 135.651 117.796 1.00131.94 O
ATOM 2 P A B 21 -78.559 134.115 118.250 1.00157.49 P
ATOM 3 OP1 A B 21 -78.901 133.347 117.026 1.00 75.50 O
ATOM 4 OP2 A B 21 -79.455 134.026 119.432 1.00 75.50 O
ATOM 5 O5' A B 21 -77.102 133.692 118.727 1.00106.16 O
ATOM 6 C5' A B 21 -76.211 133.009 117.837 1.00106.16 C
ATOM 7 C4' A B 21 -74.831 132.920 118.437 1.00106.16 C
ATOM 8 O4' A B 21 -74.915 132.482 119.814 1.00106.16 O
ATOM 9 C3' A B 21 -73.951 131.891 117.753 1.00106.16 C
ATOM 10 O3' A B 21 -73.308 132.451 116.632 1.00106.16 O
ATOM 11 C2' A B 21 -72.980 131.479 118.848 1.00106.16 C
ATOM 12 O2' A B 21 -71.897 132.378 118.984 1.00106.16 O
ATOM 13 C1' A B 21 -73.870 131.567 120.088 1.00106.16 C
ATOM 14 N9 A B 21 -74.477 130.295 120.486 1.00 27.14 N
ATOM 15 C8 A B 21 -75.815 129.988 120.526 1.00 27.14 C
ATOM 16 N7 A B 21 -76.069 128.798 121.010 1.00 27.14 N
ATOM 17 C5 A B 21 -74.815 128.276 121.287 1.00 27.14 C
ATOM 18 C6 A B 21 -74.407 127.053 121.838 1.00 27.14 C
ATOM 19 N6 A B 21 -75.253 126.107 122.242 1.00 27.14 N
ATOM 20 N1 A B 21 -73.082 126.836 121.972 1.00 27.14 N
ATOM 21 C2 A B 21 -72.232 127.799 121.585 1.00 27.14 C
ATOM 22 N3 A B 21 -72.496 128.997 121.065 1.00 27.14 N
ATOM 23 C4 A B 21 -73.823 129.176 120.944 1.00 27.14 C
ATOM 24 P G B 22 -73.721 131.961 115.166 1.00 69.53 P
ATOM 25 OP1 G B 22 -74.771 132.900 114.690 1.00 64.55 O
ATOM 26 OP2 G B 22 -73.994 130.501 115.191 1.00 64.55 O
ATOM 27 O5' G B 22 -72.401 132.214 114.321 1.00 34.74 O
TER
Atoms:
OP1: (-80.547,119.272,118.608)
OP2: (-80.165,121.383,117.200)
C3': (-77.155,121.345,121.619)
C1': (-75.476,122.537,120.444)
C5': (-77.635,119.779,119.599)
O6: (-75.897,127.707,117.430)
O4': (-75.853,121.426,119.658)
C8: (-77.208,124.190,119.553)
C2: (-73.217,125.672,118.591)
C6: (-75.340,126.755,117.992)
C5: (-75.926,125.639,118.663)
C4: (-75.093,124.681,119.202)
P: (-79.618,120.197,117.909)
C4': (-76.622,120.504,120.467)
C2': (-76.024,122.341,121.858)
O2': (-74.989,121.819,122.672)
N1: (-73.953,126.685,118.012)
N2: (-71.880,125.782,118.518)
N3: (-73.747,124.631,119.201)
N7: (-77.258,125.319,118.895)
N9: (-75.920,123.750,119.766)
O5': (-78.536,120.710,118.963)
O3': (-77.378,120.534,122.765)
OP2: (-80.165,121.383,117.200)
C3': (-77.155,121.345,121.619)
C1': (-75.476,122.537,120.444)
C5': (-77.635,119.779,119.599)
O6: (-75.897,127.707,117.430)
O4': (-75.853,121.426,119.658)
C8: (-77.208,124.190,119.553)
C2: (-73.217,125.672,118.591)
C6: (-75.340,126.755,117.992)
C5: (-75.926,125.639,118.663)
C4: (-75.093,124.681,119.202)
P: (-79.618,120.197,117.909)
C4': (-76.622,120.504,120.467)
C2': (-76.024,122.341,121.858)
O2': (-74.989,121.819,122.672)
N1: (-73.953,126.685,118.012)
N2: (-71.880,125.782,118.518)
N3: (-73.747,124.631,119.201)
N7: (-77.258,125.319,118.895)
N9: (-75.920,123.750,119.766)
O5': (-78.536,120.710,118.963)
O3': (-77.378,120.534,122.765)
OP1: (-78.901,133.347,117.026)
OP2: (-79.455,134.026,119.432)
C3': (-73.951,131.891,117.753)
C1': (-73.870,131.567,120.088)
C5': (-76.211,133.009,117.837)
O4': (-74.915,132.482,119.814)
C8: (-75.815,129.988,120.526)
O2': (-71.897,132.378,118.984)
C6: (-74.407,127.053,121.838)
C5: (-74.815,128.276,121.287)
C4: (-73.823,129.176,120.944)
P: (-78.559,134.115,118.250)
C4': (-74.831,132.920,118.437)
C2': (-72.980,131.479,118.848)
C2: (-72.232,127.799,121.585)
N1: (-73.082,126.836,121.972)
N3: (-72.496,128.997,121.065)
N6: (-75.253,126.107,122.242)
N7: (-76.069,128.798,121.010)
N9: (-74.477,130.295,120.486)
O5': (-77.102,133.692,118.727)
O3': (-73.308,132.451,116.632)
OP2: (-79.455,134.026,119.432)
C3': (-73.951,131.891,117.753)
C1': (-73.870,131.567,120.088)
C5': (-76.211,133.009,117.837)
O4': (-74.915,132.482,119.814)
C8: (-75.815,129.988,120.526)
O2': (-71.897,132.378,118.984)
C6: (-74.407,127.053,121.838)
C5: (-74.815,128.276,121.287)
C4: (-73.823,129.176,120.944)
P: (-78.559,134.115,118.250)
C4': (-74.831,132.920,118.437)
C2': (-72.980,131.479,118.848)
C2: (-72.232,127.799,121.585)
N1: (-73.082,126.836,121.972)
N3: (-72.496,128.997,121.065)
N6: (-75.253,126.107,122.242)
N7: (-76.069,128.798,121.010)
N9: (-74.477,130.295,120.486)
O5': (-77.102,133.692,118.727)
O3': (-73.308,132.451,116.632)
Image (generated by PyMOL):