Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1554:1533
Extra
PDB:
ATOM 1 O3' G A 553 99.144 -20.116 27.918 1.00 46.78 O
ATOM 2 P G A 554 99.702 -18.924 28.834 1.00 43.10 P
ATOM 3 OP1 G A 554 100.805 -18.281 28.099 1.00 43.45 O
ATOM 4 OP2 G A 554 99.941 -19.454 30.183 1.00 42.96 O
ATOM 5 O5' G A 554 98.480 -17.938 28.869 1.00 42.72 O
ATOM 6 C5' G A 554 97.968 -17.396 27.660 1.00 42.79 C
ATOM 7 C4' G A 554 97.259 -16.117 27.898 1.00 42.47 C
ATOM 8 O4' G A 554 96.213 -16.337 28.872 1.00 42.07 O
ATOM 9 C3' G A 554 98.128 -15.007 28.460 1.00 42.48 C
ATOM 10 O3' G A 554 97.760 -13.807 27.851 1.00 42.43 O
ATOM 11 C2' G A 554 97.730 -14.936 29.927 1.00 42.10 C
ATOM 12 O2' G A 554 97.876 -13.647 30.505 1.00 41.94 O
ATOM 13 C1' G A 554 96.278 -15.333 29.854 1.00 41.82 C
ATOM 14 N9 G A 554 95.739 -15.830 31.109 1.00 41.51 N
ATOM 15 C8 G A 554 96.442 -16.369 32.141 1.00 41.52 C
ATOM 16 N7 G A 554 95.693 -16.681 33.161 1.00 41.21 N
ATOM 17 C5 G A 554 94.422 -16.272 32.774 1.00 40.96 C
ATOM 18 C6 G A 554 93.195 -16.319 33.460 1.00 40.59 C
ATOM 19 O6 G A 554 92.994 -16.752 34.569 1.00 40.40 O
ATOM 20 N1 G A 554 92.129 -15.826 32.760 1.00 40.45 N
ATOM 21 C2 G A 554 92.233 -15.294 31.522 1.00 40.65 C
ATOM 22 N2 G A 554 91.062 -14.856 31.036 1.00 40.47 N
ATOM 23 N3 G A 554 93.366 -15.228 30.823 1.00 41.01 N
ATOM 24 C4 G A 554 94.424 -15.741 31.510 1.00 41.14 C
ATOM 25 P A A 555 98.706 -13.172 26.780 1.00 42.80 P
ATOM 26 OP1 A A 555 98.174 -13.567 25.452 1.00 42.98 O
ATOM 27 OP2 A A 555 100.076 -13.543 27.130 1.00 43.07 O
ATOM 28 O5' A A 555 98.505 -11.636 27.064 1.00 42.61 O
TER
ATOM 1 O3' G B 532 95.999 -8.963 32.586 1.00 39.74 O
ATOM 2 P A B 533 96.151 -8.964 34.186 1.00 47.72 P
ATOM 3 OP1 A B 533 95.725 -7.647 34.721 1.00 47.50 O
ATOM 4 OP2 A B 533 97.576 -9.413 34.439 1.00 48.01 O
ATOM 5 O5' A B 533 95.133 -10.074 34.635 1.00 47.46 O
ATOM 6 C5' A B 533 94.170 -9.815 35.628 1.00 47.09 C
ATOM 7 C4' A B 533 93.588 -11.104 36.123 1.00 46.94 C
ATOM 8 O4' A B 533 92.859 -11.709 35.044 1.00 46.98 O
ATOM 9 C3' A B 533 94.620 -12.148 36.567 1.00 47.15 C
ATOM 10 O3' A B 533 94.773 -12.181 37.970 1.00 46.99 O
ATOM 11 C2' A B 533 94.108 -13.459 36.002 1.00 47.19 C
ATOM 12 O2' A B 533 93.218 -14.065 36.915 1.00 46.91 O
ATOM 13 C1' A B 533 93.320 -13.001 34.788 1.00 47.19 C
ATOM 14 N9 A B 533 94.139 -12.925 33.591 1.00 47.55 N
ATOM 15 C8 A B 533 95.455 -13.136 33.405 1.00 47.88 C
ATOM 16 N7 A B 533 95.838 -12.908 32.177 1.00 48.15 N
ATOM 17 C5 A B 533 94.702 -12.464 31.520 1.00 48.00 C
ATOM 18 C6 A B 533 94.425 -12.080 30.182 1.00 48.16 C
ATOM 19 N6 A B 533 95.307 -12.022 29.167 1.00 48.54 N
ATOM 20 N1 A B 533 93.159 -11.745 29.922 1.00 47.93 N
ATOM 21 C2 A B 533 92.265 -11.777 30.900 1.00 47.57 C
ATOM 22 N3 A B 533 92.394 -12.121 32.164 1.00 47.38 N
ATOM 23 C4 A B 533 93.649 -12.472 32.409 1.00 47.62 C
ATOM 24 P G B 534 96.232 -12.073 38.626 1.00 45.53 P
ATOM 25 OP1 G B 534 96.121 -12.410 40.076 1.00 45.34 O
ATOM 26 OP2 G B 534 96.762 -10.749 38.265 1.00 45.64 O
ATOM 27 O5' G B 534 96.983 -13.244 37.891 1.00 45.86 O
TER
ATOM 2 P G A 554 99.702 -18.924 28.834 1.00 43.10 P
ATOM 3 OP1 G A 554 100.805 -18.281 28.099 1.00 43.45 O
ATOM 4 OP2 G A 554 99.941 -19.454 30.183 1.00 42.96 O
ATOM 5 O5' G A 554 98.480 -17.938 28.869 1.00 42.72 O
ATOM 6 C5' G A 554 97.968 -17.396 27.660 1.00 42.79 C
ATOM 7 C4' G A 554 97.259 -16.117 27.898 1.00 42.47 C
ATOM 8 O4' G A 554 96.213 -16.337 28.872 1.00 42.07 O
ATOM 9 C3' G A 554 98.128 -15.007 28.460 1.00 42.48 C
ATOM 10 O3' G A 554 97.760 -13.807 27.851 1.00 42.43 O
ATOM 11 C2' G A 554 97.730 -14.936 29.927 1.00 42.10 C
ATOM 12 O2' G A 554 97.876 -13.647 30.505 1.00 41.94 O
ATOM 13 C1' G A 554 96.278 -15.333 29.854 1.00 41.82 C
ATOM 14 N9 G A 554 95.739 -15.830 31.109 1.00 41.51 N
ATOM 15 C8 G A 554 96.442 -16.369 32.141 1.00 41.52 C
ATOM 16 N7 G A 554 95.693 -16.681 33.161 1.00 41.21 N
ATOM 17 C5 G A 554 94.422 -16.272 32.774 1.00 40.96 C
ATOM 18 C6 G A 554 93.195 -16.319 33.460 1.00 40.59 C
ATOM 19 O6 G A 554 92.994 -16.752 34.569 1.00 40.40 O
ATOM 20 N1 G A 554 92.129 -15.826 32.760 1.00 40.45 N
ATOM 21 C2 G A 554 92.233 -15.294 31.522 1.00 40.65 C
ATOM 22 N2 G A 554 91.062 -14.856 31.036 1.00 40.47 N
ATOM 23 N3 G A 554 93.366 -15.228 30.823 1.00 41.01 N
ATOM 24 C4 G A 554 94.424 -15.741 31.510 1.00 41.14 C
ATOM 25 P A A 555 98.706 -13.172 26.780 1.00 42.80 P
ATOM 26 OP1 A A 555 98.174 -13.567 25.452 1.00 42.98 O
ATOM 27 OP2 A A 555 100.076 -13.543 27.130 1.00 43.07 O
ATOM 28 O5' A A 555 98.505 -11.636 27.064 1.00 42.61 O
TER
ATOM 1 O3' G B 532 95.999 -8.963 32.586 1.00 39.74 O
ATOM 2 P A B 533 96.151 -8.964 34.186 1.00 47.72 P
ATOM 3 OP1 A B 533 95.725 -7.647 34.721 1.00 47.50 O
ATOM 4 OP2 A B 533 97.576 -9.413 34.439 1.00 48.01 O
ATOM 5 O5' A B 533 95.133 -10.074 34.635 1.00 47.46 O
ATOM 6 C5' A B 533 94.170 -9.815 35.628 1.00 47.09 C
ATOM 7 C4' A B 533 93.588 -11.104 36.123 1.00 46.94 C
ATOM 8 O4' A B 533 92.859 -11.709 35.044 1.00 46.98 O
ATOM 9 C3' A B 533 94.620 -12.148 36.567 1.00 47.15 C
ATOM 10 O3' A B 533 94.773 -12.181 37.970 1.00 46.99 O
ATOM 11 C2' A B 533 94.108 -13.459 36.002 1.00 47.19 C
ATOM 12 O2' A B 533 93.218 -14.065 36.915 1.00 46.91 O
ATOM 13 C1' A B 533 93.320 -13.001 34.788 1.00 47.19 C
ATOM 14 N9 A B 533 94.139 -12.925 33.591 1.00 47.55 N
ATOM 15 C8 A B 533 95.455 -13.136 33.405 1.00 47.88 C
ATOM 16 N7 A B 533 95.838 -12.908 32.177 1.00 48.15 N
ATOM 17 C5 A B 533 94.702 -12.464 31.520 1.00 48.00 C
ATOM 18 C6 A B 533 94.425 -12.080 30.182 1.00 48.16 C
ATOM 19 N6 A B 533 95.307 -12.022 29.167 1.00 48.54 N
ATOM 20 N1 A B 533 93.159 -11.745 29.922 1.00 47.93 N
ATOM 21 C2 A B 533 92.265 -11.777 30.900 1.00 47.57 C
ATOM 22 N3 A B 533 92.394 -12.121 32.164 1.00 47.38 N
ATOM 23 C4 A B 533 93.649 -12.472 32.409 1.00 47.62 C
ATOM 24 P G B 534 96.232 -12.073 38.626 1.00 45.53 P
ATOM 25 OP1 G B 534 96.121 -12.410 40.076 1.00 45.34 O
ATOM 26 OP2 G B 534 96.762 -10.749 38.265 1.00 45.64 O
ATOM 27 O5' G B 534 96.983 -13.244 37.891 1.00 45.86 O
TER
Atoms:
OP1: (100.805,-18.281,28.099)
OP2: (99.941,-19.454,30.183)
C3': (98.128,-15.007,28.460)
C1': (96.278,-15.333,29.854)
C5': (97.968,-17.396,27.660)
O6: (92.994,-16.752,34.569)
O4': (96.213,-16.337,28.872)
C8: (96.442,-16.369,32.141)
C2: (92.233,-15.294,31.522)
C6: (93.195,-16.319,33.460)
C5: (94.422,-16.272,32.774)
C4: (94.424,-15.741,31.510)
P: (99.702,-18.924,28.834)
C4': (97.259,-16.117,27.898)
C2': (97.730,-14.936,29.927)
O2': (97.876,-13.647,30.505)
N1: (92.129,-15.826,32.760)
N2: (91.062,-14.856,31.036)
N3: (93.366,-15.228,30.823)
N7: (95.693,-16.681,33.161)
N9: (95.739,-15.830,31.109)
O5': (98.480,-17.938,28.869)
O3': (97.760,-13.807,27.851)
OP2: (99.941,-19.454,30.183)
C3': (98.128,-15.007,28.460)
C1': (96.278,-15.333,29.854)
C5': (97.968,-17.396,27.660)
O6: (92.994,-16.752,34.569)
O4': (96.213,-16.337,28.872)
C8: (96.442,-16.369,32.141)
C2: (92.233,-15.294,31.522)
C6: (93.195,-16.319,33.460)
C5: (94.422,-16.272,32.774)
C4: (94.424,-15.741,31.510)
P: (99.702,-18.924,28.834)
C4': (97.259,-16.117,27.898)
C2': (97.730,-14.936,29.927)
O2': (97.876,-13.647,30.505)
N1: (92.129,-15.826,32.760)
N2: (91.062,-14.856,31.036)
N3: (93.366,-15.228,30.823)
N7: (95.693,-16.681,33.161)
N9: (95.739,-15.830,31.109)
O5': (98.480,-17.938,28.869)
O3': (97.760,-13.807,27.851)
OP1: (95.725,-7.647,34.721)
OP2: (97.576,-9.413,34.439)
C3': (94.620,-12.148,36.567)
C1': (93.320,-13.001,34.788)
C5': (94.170,-9.815,35.628)
O4': (92.859,-11.709,35.044)
C8: (95.455,-13.136,33.405)
O2': (93.218,-14.065,36.915)
C6: (94.425,-12.080,30.182)
C5: (94.702,-12.464,31.520)
C4: (93.649,-12.472,32.409)
P: (96.151,-8.964,34.186)
C4': (93.588,-11.104,36.123)
C2': (94.108,-13.459,36.002)
C2: (92.265,-11.777,30.900)
N1: (93.159,-11.745,29.922)
N3: (92.394,-12.121,32.164)
N6: (95.307,-12.022,29.167)
N7: (95.838,-12.908,32.177)
N9: (94.139,-12.925,33.591)
O5': (95.133,-10.074,34.635)
O3': (94.773,-12.181,37.970)
OP2: (97.576,-9.413,34.439)
C3': (94.620,-12.148,36.567)
C1': (93.320,-13.001,34.788)
C5': (94.170,-9.815,35.628)
O4': (92.859,-11.709,35.044)
C8: (95.455,-13.136,33.405)
O2': (93.218,-14.065,36.915)
C6: (94.425,-12.080,30.182)
C5: (94.702,-12.464,31.520)
C4: (93.649,-12.472,32.409)
P: (96.151,-8.964,34.186)
C4': (93.588,-11.104,36.123)
C2': (94.108,-13.459,36.002)
C2: (92.265,-11.777,30.900)
N1: (93.159,-11.745,29.922)
N3: (92.394,-12.121,32.164)
N6: (95.307,-12.022,29.167)
N7: (95.838,-12.908,32.177)
N9: (94.139,-12.925,33.591)
O5': (95.133,-10.074,34.635)
O3': (94.773,-12.181,37.970)
Image (generated by PyMOL):