Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:046:049
Extra
PDB:
ATOM 1 O3' U A 45 54.870 164.897 36.184 1.00 50.10 O
ATOM 2 P G A 46 53.918 165.819 37.090 1.00 51.91 P
ATOM 3 OP1 G A 46 53.690 167.081 36.348 1.00 53.88 O
ATOM 4 OP2 G A 46 54.452 165.865 38.468 1.00 52.42 O
ATOM 5 O5' G A 46 52.538 165.034 37.114 1.00 52.78 O
ATOM 6 C5' G A 46 51.857 164.741 35.892 1.00 53.01 C
ATOM 7 C4' G A 46 50.375 164.709 36.121 1.00 53.86 C
ATOM 8 O4' G A 46 50.043 163.572 36.967 1.00 56.21 O
ATOM 9 C3' G A 46 49.786 165.933 36.815 1.00 55.31 C
ATOM 10 O3' G A 46 48.495 166.156 36.263 1.00 56.93 O
ATOM 11 C2' G A 46 49.646 165.462 38.260 1.00 54.16 C
ATOM 12 O2' G A 46 48.646 166.152 38.978 1.00 52.32 O
ATOM 13 C1' G A 46 49.231 164.012 38.036 1.00 55.77 C
ATOM 14 N9 G A 46 49.361 163.074 39.152 1.00 56.68 N
ATOM 15 C8 G A 46 50.108 163.217 40.302 1.00 55.66 C
ATOM 16 N7 G A 46 50.009 162.193 41.108 1.00 54.69 N
ATOM 17 C5 G A 46 49.146 161.324 40.453 1.00 56.19 C
ATOM 18 C6 G A 46 48.667 160.043 40.833 1.00 55.05 C
ATOM 19 O6 G A 46 48.914 159.401 41.854 1.00 53.59 O
ATOM 20 N1 G A 46 47.820 159.507 39.867 1.00 57.25 N
ATOM 21 C2 G A 46 47.479 160.119 38.687 1.00 56.24 C
ATOM 22 N2 G A 46 46.664 159.428 37.878 1.00 55.03 N
ATOM 23 N3 G A 46 47.911 161.314 38.325 1.00 56.51 N
ATOM 24 C4 G A 46 48.737 161.853 39.246 1.00 56.36 C
ATOM 25 P C A 47 48.168 167.551 35.544 1.00 58.01 P
ATOM 26 OP1 C A 47 46.765 167.476 35.064 1.00 61.06 O
ATOM 27 OP2 C A 47 49.263 167.822 34.572 1.00 57.41 O
ATOM 28 O5' C A 47 48.223 168.596 36.743 1.00 57.53 O
TER
ATOM 1 O3' C B 48 48.903 169.502 45.588 1.00 72.71 O
ATOM 2 P A B 49 50.221 168.589 45.456 1.00 72.19 P
ATOM 3 OP1 A B 49 50.972 168.709 46.738 1.00 73.15 O
ATOM 4 OP2 A B 49 50.900 168.927 44.171 1.00 72.51 O
ATOM 5 O5' A B 49 49.649 167.106 45.341 1.00 69.80 O
ATOM 6 C5' A B 49 49.004 166.481 46.460 1.00 65.38 C
ATOM 7 C4' A B 49 49.171 164.983 46.397 1.00 63.27 C
ATOM 8 O4' A B 49 48.087 164.389 45.629 1.00 62.44 O
ATOM 9 C3' A B 49 50.476 164.457 45.796 1.00 60.50 C
ATOM 10 O3' A B 49 51.007 163.416 46.607 1.00 59.55 O
ATOM 11 C2' A B 49 50.024 163.893 44.446 1.00 60.95 C
ATOM 12 O2' A B 49 50.826 162.829 43.970 1.00 59.30 O
ATOM 13 C1' A B 49 48.620 163.393 44.782 1.00 61.24 C
ATOM 14 N9 A B 49 47.733 163.231 43.626 1.00 60.96 N
ATOM 15 C8 A B 49 47.566 164.080 42.558 1.00 60.58 C
ATOM 16 N7 A B 49 46.715 163.641 41.662 1.00 60.21 N
ATOM 17 C5 A B 49 46.286 162.427 42.177 1.00 61.47 C
ATOM 18 C6 A B 49 45.385 161.465 41.696 1.00 61.18 C
ATOM 19 N6 A B 49 44.740 161.574 40.533 1.00 60.84 N
ATOM 20 N1 A B 49 45.173 160.367 42.454 1.00 60.68 N
ATOM 21 C2 A B 49 45.835 160.251 43.610 1.00 59.10 C
ATOM 22 N3 A B 49 46.713 161.081 44.164 1.00 60.39 N
ATOM 23 C4 A B 49 46.897 162.165 43.390 1.00 60.90 C
ATOM 24 P A B 50 52.509 163.541 47.171 1.00 59.29 P
ATOM 25 OP1 A B 50 52.509 164.591 48.219 1.00 59.76 O
ATOM 26 OP2 A B 50 53.455 163.644 46.029 1.00 59.15 O
ATOM 27 O5' A B 50 52.757 162.152 47.895 1.00 57.97 O
TER
ATOM 2 P G A 46 53.918 165.819 37.090 1.00 51.91 P
ATOM 3 OP1 G A 46 53.690 167.081 36.348 1.00 53.88 O
ATOM 4 OP2 G A 46 54.452 165.865 38.468 1.00 52.42 O
ATOM 5 O5' G A 46 52.538 165.034 37.114 1.00 52.78 O
ATOM 6 C5' G A 46 51.857 164.741 35.892 1.00 53.01 C
ATOM 7 C4' G A 46 50.375 164.709 36.121 1.00 53.86 C
ATOM 8 O4' G A 46 50.043 163.572 36.967 1.00 56.21 O
ATOM 9 C3' G A 46 49.786 165.933 36.815 1.00 55.31 C
ATOM 10 O3' G A 46 48.495 166.156 36.263 1.00 56.93 O
ATOM 11 C2' G A 46 49.646 165.462 38.260 1.00 54.16 C
ATOM 12 O2' G A 46 48.646 166.152 38.978 1.00 52.32 O
ATOM 13 C1' G A 46 49.231 164.012 38.036 1.00 55.77 C
ATOM 14 N9 G A 46 49.361 163.074 39.152 1.00 56.68 N
ATOM 15 C8 G A 46 50.108 163.217 40.302 1.00 55.66 C
ATOM 16 N7 G A 46 50.009 162.193 41.108 1.00 54.69 N
ATOM 17 C5 G A 46 49.146 161.324 40.453 1.00 56.19 C
ATOM 18 C6 G A 46 48.667 160.043 40.833 1.00 55.05 C
ATOM 19 O6 G A 46 48.914 159.401 41.854 1.00 53.59 O
ATOM 20 N1 G A 46 47.820 159.507 39.867 1.00 57.25 N
ATOM 21 C2 G A 46 47.479 160.119 38.687 1.00 56.24 C
ATOM 22 N2 G A 46 46.664 159.428 37.878 1.00 55.03 N
ATOM 23 N3 G A 46 47.911 161.314 38.325 1.00 56.51 N
ATOM 24 C4 G A 46 48.737 161.853 39.246 1.00 56.36 C
ATOM 25 P C A 47 48.168 167.551 35.544 1.00 58.01 P
ATOM 26 OP1 C A 47 46.765 167.476 35.064 1.00 61.06 O
ATOM 27 OP2 C A 47 49.263 167.822 34.572 1.00 57.41 O
ATOM 28 O5' C A 47 48.223 168.596 36.743 1.00 57.53 O
TER
ATOM 1 O3' C B 48 48.903 169.502 45.588 1.00 72.71 O
ATOM 2 P A B 49 50.221 168.589 45.456 1.00 72.19 P
ATOM 3 OP1 A B 49 50.972 168.709 46.738 1.00 73.15 O
ATOM 4 OP2 A B 49 50.900 168.927 44.171 1.00 72.51 O
ATOM 5 O5' A B 49 49.649 167.106 45.341 1.00 69.80 O
ATOM 6 C5' A B 49 49.004 166.481 46.460 1.00 65.38 C
ATOM 7 C4' A B 49 49.171 164.983 46.397 1.00 63.27 C
ATOM 8 O4' A B 49 48.087 164.389 45.629 1.00 62.44 O
ATOM 9 C3' A B 49 50.476 164.457 45.796 1.00 60.50 C
ATOM 10 O3' A B 49 51.007 163.416 46.607 1.00 59.55 O
ATOM 11 C2' A B 49 50.024 163.893 44.446 1.00 60.95 C
ATOM 12 O2' A B 49 50.826 162.829 43.970 1.00 59.30 O
ATOM 13 C1' A B 49 48.620 163.393 44.782 1.00 61.24 C
ATOM 14 N9 A B 49 47.733 163.231 43.626 1.00 60.96 N
ATOM 15 C8 A B 49 47.566 164.080 42.558 1.00 60.58 C
ATOM 16 N7 A B 49 46.715 163.641 41.662 1.00 60.21 N
ATOM 17 C5 A B 49 46.286 162.427 42.177 1.00 61.47 C
ATOM 18 C6 A B 49 45.385 161.465 41.696 1.00 61.18 C
ATOM 19 N6 A B 49 44.740 161.574 40.533 1.00 60.84 N
ATOM 20 N1 A B 49 45.173 160.367 42.454 1.00 60.68 N
ATOM 21 C2 A B 49 45.835 160.251 43.610 1.00 59.10 C
ATOM 22 N3 A B 49 46.713 161.081 44.164 1.00 60.39 N
ATOM 23 C4 A B 49 46.897 162.165 43.390 1.00 60.90 C
ATOM 24 P A B 50 52.509 163.541 47.171 1.00 59.29 P
ATOM 25 OP1 A B 50 52.509 164.591 48.219 1.00 59.76 O
ATOM 26 OP2 A B 50 53.455 163.644 46.029 1.00 59.15 O
ATOM 27 O5' A B 50 52.757 162.152 47.895 1.00 57.97 O
TER
Atoms:
OP1: (53.690,167.081,36.348)
OP2: (54.452,165.865,38.468)
C3': (49.786,165.933,36.815)
C1': (49.231,164.012,38.036)
C5': (51.857,164.741,35.892)
O6: (48.914,159.401,41.854)
O4': (50.043,163.572,36.967)
C8: (50.108,163.217,40.302)
C2: (47.479,160.119,38.687)
C6: (48.667,160.043,40.833)
C5: (49.146,161.324,40.453)
C4: (48.737,161.853,39.246)
P: (53.918,165.819,37.090)
C4': (50.375,164.709,36.121)
C2': (49.646,165.462,38.260)
O2': (48.646,166.152,38.978)
N1: (47.820,159.507,39.867)
N2: (46.664,159.428,37.878)
N3: (47.911,161.314,38.325)
N7: (50.009,162.193,41.108)
N9: (49.361,163.074,39.152)
O5': (52.538,165.034,37.114)
O3': (48.495,166.156,36.263)
OP2: (54.452,165.865,38.468)
C3': (49.786,165.933,36.815)
C1': (49.231,164.012,38.036)
C5': (51.857,164.741,35.892)
O6: (48.914,159.401,41.854)
O4': (50.043,163.572,36.967)
C8: (50.108,163.217,40.302)
C2: (47.479,160.119,38.687)
C6: (48.667,160.043,40.833)
C5: (49.146,161.324,40.453)
C4: (48.737,161.853,39.246)
P: (53.918,165.819,37.090)
C4': (50.375,164.709,36.121)
C2': (49.646,165.462,38.260)
O2': (48.646,166.152,38.978)
N1: (47.820,159.507,39.867)
N2: (46.664,159.428,37.878)
N3: (47.911,161.314,38.325)
N7: (50.009,162.193,41.108)
N9: (49.361,163.074,39.152)
O5': (52.538,165.034,37.114)
O3': (48.495,166.156,36.263)
OP1: (50.972,168.709,46.738)
OP2: (50.900,168.927,44.171)
C3': (50.476,164.457,45.796)
C1': (48.620,163.393,44.782)
C5': (49.004,166.481,46.460)
O4': (48.087,164.389,45.629)
C8: (47.566,164.080,42.558)
O2': (50.826,162.829,43.970)
C6: (45.385,161.465,41.696)
C5: (46.286,162.427,42.177)
C4: (46.897,162.165,43.390)
P: (50.221,168.589,45.456)
C4': (49.171,164.983,46.397)
C2': (50.024,163.893,44.446)
C2: (45.835,160.251,43.610)
N1: (45.173,160.367,42.454)
N3: (46.713,161.081,44.164)
N6: (44.740,161.574,40.533)
N7: (46.715,163.641,41.662)
N9: (47.733,163.231,43.626)
O5': (49.649,167.106,45.341)
O3': (51.007,163.416,46.607)
OP2: (50.900,168.927,44.171)
C3': (50.476,164.457,45.796)
C1': (48.620,163.393,44.782)
C5': (49.004,166.481,46.460)
O4': (48.087,164.389,45.629)
C8: (47.566,164.080,42.558)
O2': (50.826,162.829,43.970)
C6: (45.385,161.465,41.696)
C5: (46.286,162.427,42.177)
C4: (46.897,162.165,43.390)
P: (50.221,168.589,45.456)
C4': (49.171,164.983,46.397)
C2': (50.024,163.893,44.446)
C2: (45.835,160.251,43.610)
N1: (45.173,160.367,42.454)
N3: (46.713,161.081,44.164)
N6: (44.740,161.574,40.533)
N7: (46.715,163.641,41.662)
N9: (47.733,163.231,43.626)
O5': (49.649,167.106,45.341)
O3': (51.007,163.416,46.607)
Image (generated by PyMOL):