Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:556:832
Extra
PDB:
ATOM 1 O3' G A 55 128.106 -28.590 171.204 1.00 55.65 O
ATOM 2 P G A 56 127.126 -27.687 170.309 1.00 60.22 P
ATOM 3 OP1 G A 56 127.272 -28.147 168.922 1.00 60.96 O
ATOM 4 OP2 G A 56 127.470 -26.263 170.638 1.00 59.74 O
ATOM 5 O5' G A 56 125.649 -28.016 170.885 1.00 60.16 O
ATOM 6 C5' G A 56 125.265 -29.324 171.316 1.00 60.28 C
ATOM 7 C4' G A 56 124.633 -29.346 172.721 1.00 59.71 C
ATOM 8 O4' G A 56 125.351 -28.471 173.637 1.00 59.03 O
ATOM 9 C3' G A 56 123.161 -28.952 172.839 1.00 59.73 C
ATOM 10 O3' G A 56 122.530 -29.792 173.809 1.00 59.54 O
ATOM 11 C2' G A 56 123.250 -27.558 173.437 1.00 59.15 C
ATOM 12 O2' G A 56 122.100 -27.150 174.134 1.00 58.89 O
ATOM 13 C1' G A 56 124.416 -27.728 174.379 1.00 58.64 C
ATOM 14 N9 G A 56 125.036 -26.469 174.801 1.00 58.13 N
ATOM 15 C8 G A 56 125.763 -25.638 174.006 1.00 58.25 C
ATOM 16 N7 G A 56 126.215 -24.593 174.644 1.00 57.71 N
ATOM 17 C5 G A 56 125.753 -24.730 175.946 1.00 57.22 C
ATOM 18 C6 G A 56 125.914 -23.884 177.075 1.00 56.55 C
ATOM 19 O6 G A 56 126.519 -22.805 177.178 1.00 56.25 O
ATOM 20 N1 G A 56 125.281 -24.393 178.176 1.00 56.24 N
ATOM 21 C2 G A 56 124.611 -25.558 178.197 1.00 56.53 C
ATOM 22 N2 G A 56 124.110 -25.887 179.380 1.00 56.15 N
ATOM 23 N3 G A 56 124.431 -26.340 177.157 1.00 57.14 N
ATOM 24 C4 G A 56 125.026 -25.879 176.054 1.00 57.47 C
ATOM 25 P A A 57 121.995 -31.268 173.436 1.00 56.74 P
ATOM 26 OP1 A A 57 122.810 -31.769 172.262 1.00 57.29 O
ATOM 27 OP2 A A 57 120.541 -31.172 173.307 1.00 56.95 O
ATOM 28 O5' A A 57 122.358 -32.105 174.747 1.00 56.30 O
TER
ATOM 1 O3' C B 31 116.136 -26.176 171.035 1.00 59.94 O
ATOM 2 P A B 32 117.443 -27.109 170.830 1.00 61.75 P
ATOM 3 OP1 A B 32 117.297 -27.784 169.492 1.00 62.60 O
ATOM 4 OP2 A B 32 117.581 -27.955 172.039 1.00 61.33 O
ATOM 5 O5' A B 32 118.636 -26.049 170.766 1.00 61.22 O
ATOM 6 C5' A B 32 118.748 -25.143 169.674 1.00 61.54 C
ATOM 7 C4' A B 32 119.911 -24.218 169.853 1.00 60.96 C
ATOM 8 O4' A B 32 119.890 -23.705 171.207 1.00 60.19 O
ATOM 9 C3' A B 32 121.287 -24.871 169.681 1.00 60.84 C
ATOM 10 O3' A B 32 122.207 -23.904 169.240 1.00 60.64 O
ATOM 11 C2' A B 32 121.663 -25.227 171.096 1.00 60.12 C
ATOM 12 O2' A B 32 123.054 -25.371 171.284 1.00 59.74 O
ATOM 13 C1' A B 32 121.119 -24.013 171.834 1.00 59.64 C
ATOM 14 N9 A B 32 120.880 -24.229 173.248 1.00 59.06 N
ATOM 15 C8 A B 32 120.009 -25.078 173.853 1.00 59.18 C
ATOM 16 N7 A B 32 120.074 -24.977 175.163 1.00 58.53 N
ATOM 17 C5 A B 32 121.041 -24.001 175.412 1.00 57.96 C
ATOM 18 C6 A B 32 121.591 -23.442 176.584 1.00 57.16 C
ATOM 19 N6 A B 32 121.207 -23.799 177.807 1.00 56.78 N
ATOM 20 N1 A B 32 122.552 -22.493 176.464 1.00 56.79 N
ATOM 21 C2 A B 32 122.941 -22.142 175.238 1.00 57.20 C
ATOM 22 N3 A B 32 122.506 -22.608 174.066 1.00 57.95 N
ATOM 23 C4 A B 32 121.543 -23.532 174.222 1.00 58.29 C
ATOM 24 P U B 33 122.740 -23.918 167.750 1.00 66.97 P
ATOM 25 OP1 U B 33 121.788 -24.686 166.939 1.00 67.77 O
ATOM 26 OP2 U B 33 124.153 -24.354 167.789 1.00 66.73 O
ATOM 27 O5' U B 33 122.637 -22.385 167.388 1.00 66.89 O
TER
ATOM 2 P G A 56 127.126 -27.687 170.309 1.00 60.22 P
ATOM 3 OP1 G A 56 127.272 -28.147 168.922 1.00 60.96 O
ATOM 4 OP2 G A 56 127.470 -26.263 170.638 1.00 59.74 O
ATOM 5 O5' G A 56 125.649 -28.016 170.885 1.00 60.16 O
ATOM 6 C5' G A 56 125.265 -29.324 171.316 1.00 60.28 C
ATOM 7 C4' G A 56 124.633 -29.346 172.721 1.00 59.71 C
ATOM 8 O4' G A 56 125.351 -28.471 173.637 1.00 59.03 O
ATOM 9 C3' G A 56 123.161 -28.952 172.839 1.00 59.73 C
ATOM 10 O3' G A 56 122.530 -29.792 173.809 1.00 59.54 O
ATOM 11 C2' G A 56 123.250 -27.558 173.437 1.00 59.15 C
ATOM 12 O2' G A 56 122.100 -27.150 174.134 1.00 58.89 O
ATOM 13 C1' G A 56 124.416 -27.728 174.379 1.00 58.64 C
ATOM 14 N9 G A 56 125.036 -26.469 174.801 1.00 58.13 N
ATOM 15 C8 G A 56 125.763 -25.638 174.006 1.00 58.25 C
ATOM 16 N7 G A 56 126.215 -24.593 174.644 1.00 57.71 N
ATOM 17 C5 G A 56 125.753 -24.730 175.946 1.00 57.22 C
ATOM 18 C6 G A 56 125.914 -23.884 177.075 1.00 56.55 C
ATOM 19 O6 G A 56 126.519 -22.805 177.178 1.00 56.25 O
ATOM 20 N1 G A 56 125.281 -24.393 178.176 1.00 56.24 N
ATOM 21 C2 G A 56 124.611 -25.558 178.197 1.00 56.53 C
ATOM 22 N2 G A 56 124.110 -25.887 179.380 1.00 56.15 N
ATOM 23 N3 G A 56 124.431 -26.340 177.157 1.00 57.14 N
ATOM 24 C4 G A 56 125.026 -25.879 176.054 1.00 57.47 C
ATOM 25 P A A 57 121.995 -31.268 173.436 1.00 56.74 P
ATOM 26 OP1 A A 57 122.810 -31.769 172.262 1.00 57.29 O
ATOM 27 OP2 A A 57 120.541 -31.172 173.307 1.00 56.95 O
ATOM 28 O5' A A 57 122.358 -32.105 174.747 1.00 56.30 O
TER
ATOM 1 O3' C B 31 116.136 -26.176 171.035 1.00 59.94 O
ATOM 2 P A B 32 117.443 -27.109 170.830 1.00 61.75 P
ATOM 3 OP1 A B 32 117.297 -27.784 169.492 1.00 62.60 O
ATOM 4 OP2 A B 32 117.581 -27.955 172.039 1.00 61.33 O
ATOM 5 O5' A B 32 118.636 -26.049 170.766 1.00 61.22 O
ATOM 6 C5' A B 32 118.748 -25.143 169.674 1.00 61.54 C
ATOM 7 C4' A B 32 119.911 -24.218 169.853 1.00 60.96 C
ATOM 8 O4' A B 32 119.890 -23.705 171.207 1.00 60.19 O
ATOM 9 C3' A B 32 121.287 -24.871 169.681 1.00 60.84 C
ATOM 10 O3' A B 32 122.207 -23.904 169.240 1.00 60.64 O
ATOM 11 C2' A B 32 121.663 -25.227 171.096 1.00 60.12 C
ATOM 12 O2' A B 32 123.054 -25.371 171.284 1.00 59.74 O
ATOM 13 C1' A B 32 121.119 -24.013 171.834 1.00 59.64 C
ATOM 14 N9 A B 32 120.880 -24.229 173.248 1.00 59.06 N
ATOM 15 C8 A B 32 120.009 -25.078 173.853 1.00 59.18 C
ATOM 16 N7 A B 32 120.074 -24.977 175.163 1.00 58.53 N
ATOM 17 C5 A B 32 121.041 -24.001 175.412 1.00 57.96 C
ATOM 18 C6 A B 32 121.591 -23.442 176.584 1.00 57.16 C
ATOM 19 N6 A B 32 121.207 -23.799 177.807 1.00 56.78 N
ATOM 20 N1 A B 32 122.552 -22.493 176.464 1.00 56.79 N
ATOM 21 C2 A B 32 122.941 -22.142 175.238 1.00 57.20 C
ATOM 22 N3 A B 32 122.506 -22.608 174.066 1.00 57.95 N
ATOM 23 C4 A B 32 121.543 -23.532 174.222 1.00 58.29 C
ATOM 24 P U B 33 122.740 -23.918 167.750 1.00 66.97 P
ATOM 25 OP1 U B 33 121.788 -24.686 166.939 1.00 67.77 O
ATOM 26 OP2 U B 33 124.153 -24.354 167.789 1.00 66.73 O
ATOM 27 O5' U B 33 122.637 -22.385 167.388 1.00 66.89 O
TER
Atoms:
OP1: (127.272,-28.147,168.922)
OP2: (127.470,-26.263,170.638)
C3': (123.161,-28.952,172.839)
C1': (124.416,-27.728,174.379)
C5': (125.265,-29.324,171.316)
O6: (126.519,-22.805,177.178)
O4': (125.351,-28.471,173.637)
C8: (125.763,-25.638,174.006)
C2: (124.611,-25.558,178.197)
C6: (125.914,-23.884,177.075)
C5: (125.753,-24.730,175.946)
C4: (125.026,-25.879,176.054)
P: (127.126,-27.687,170.309)
C4': (124.633,-29.346,172.721)
C2': (123.250,-27.558,173.437)
O2': (122.100,-27.150,174.134)
N1: (125.281,-24.393,178.176)
N2: (124.110,-25.887,179.380)
N3: (124.431,-26.340,177.157)
N7: (126.215,-24.593,174.644)
N9: (125.036,-26.469,174.801)
O5': (125.649,-28.016,170.885)
O3': (122.530,-29.792,173.809)
OP2: (127.470,-26.263,170.638)
C3': (123.161,-28.952,172.839)
C1': (124.416,-27.728,174.379)
C5': (125.265,-29.324,171.316)
O6: (126.519,-22.805,177.178)
O4': (125.351,-28.471,173.637)
C8: (125.763,-25.638,174.006)
C2: (124.611,-25.558,178.197)
C6: (125.914,-23.884,177.075)
C5: (125.753,-24.730,175.946)
C4: (125.026,-25.879,176.054)
P: (127.126,-27.687,170.309)
C4': (124.633,-29.346,172.721)
C2': (123.250,-27.558,173.437)
O2': (122.100,-27.150,174.134)
N1: (125.281,-24.393,178.176)
N2: (124.110,-25.887,179.380)
N3: (124.431,-26.340,177.157)
N7: (126.215,-24.593,174.644)
N9: (125.036,-26.469,174.801)
O5': (125.649,-28.016,170.885)
O3': (122.530,-29.792,173.809)
OP1: (117.297,-27.784,169.492)
OP2: (117.581,-27.955,172.039)
C3': (121.287,-24.871,169.681)
C1': (121.119,-24.013,171.834)
C5': (118.748,-25.143,169.674)
O4': (119.890,-23.705,171.207)
C8: (120.009,-25.078,173.853)
O2': (123.054,-25.371,171.284)
C6: (121.591,-23.442,176.584)
C5: (121.041,-24.001,175.412)
C4: (121.543,-23.532,174.222)
P: (117.443,-27.109,170.830)
C4': (119.911,-24.218,169.853)
C2': (121.663,-25.227,171.096)
C2: (122.941,-22.142,175.238)
N1: (122.552,-22.493,176.464)
N3: (122.506,-22.608,174.066)
N6: (121.207,-23.799,177.807)
N7: (120.074,-24.977,175.163)
N9: (120.880,-24.229,173.248)
O5': (118.636,-26.049,170.766)
O3': (122.207,-23.904,169.240)
OP2: (117.581,-27.955,172.039)
C3': (121.287,-24.871,169.681)
C1': (121.119,-24.013,171.834)
C5': (118.748,-25.143,169.674)
O4': (119.890,-23.705,171.207)
C8: (120.009,-25.078,173.853)
O2': (123.054,-25.371,171.284)
C6: (121.591,-23.442,176.584)
C5: (121.041,-24.001,175.412)
C4: (121.543,-23.532,174.222)
P: (117.443,-27.109,170.830)
C4': (119.911,-24.218,169.853)
C2': (121.663,-25.227,171.096)
C2: (122.941,-22.142,175.238)
N1: (122.552,-22.493,176.464)
N3: (122.506,-22.608,174.066)
N6: (121.207,-23.799,177.807)
N7: (120.074,-24.977,175.163)
N9: (120.880,-24.229,173.248)
O5': (118.636,-26.049,170.766)
O3': (122.207,-23.904,169.240)
Image (generated by PyMOL):