Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D18:D8
Extra
PDB:
ATOM 1 O3' C A 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G A 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G A 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G A 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G A 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G A 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G A 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G A 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G A 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G A 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G A 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G A 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G A 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G A 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G A 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G A 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G A 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G A 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G A 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G A 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G A 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G A 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G A 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G A 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
TER
ATOM 1 O3' G B 7 -2.576 -1.553 35.227 1.00 37.15 O
ATOM 2 P A B 8 -1.772 -2.705 36.011 1.00 41.87 P
ATOM 3 OP1 A B 8 -2.329 -2.758 37.390 1.00 43.55 O
ATOM 4 OP2 A B 8 -0.310 -2.453 35.819 1.00 41.69 O
ATOM 5 O5' A B 8 -2.107 -4.048 35.206 1.00 44.57 O
ATOM 6 C5' A B 8 -3.351 -4.756 35.351 1.00 46.32 C
ATOM 7 C4' A B 8 -3.284 -6.064 34.580 1.00 48.82 C
ATOM 8 O4' A B 8 -2.819 -5.733 33.248 1.00 46.52 O
ATOM 9 C3' A B 8 -2.275 -7.073 35.130 1.00 52.27 C
ATOM 10 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 11 C2' A B 8 -1.710 -7.765 33.888 1.00 49.45 C
ATOM 12 O2' A B 8 -2.336 -8.996 33.585 1.00 51.60 O
ATOM 13 C1' A B 8 -1.962 -6.744 32.775 1.00 45.02 C
ATOM 14 N9 A B 8 -0.768 -6.125 32.212 1.00 39.42 N
ATOM 15 C8 A B 8 -0.076 -5.015 32.623 1.00 38.28 C
ATOM 16 N7 A B 8 0.957 -4.731 31.868 1.00 36.56 N
ATOM 17 C5 A B 8 0.938 -5.723 30.899 1.00 35.27 C
ATOM 18 C6 A B 8 1.764 -5.988 29.807 1.00 34.49 C
ATOM 19 N6 A B 8 2.822 -5.244 29.488 1.00 32.94 N
ATOM 20 N1 A B 8 1.467 -7.059 29.038 1.00 33.44 N
ATOM 21 C2 A B 8 0.411 -7.802 29.356 1.00 33.39 C
ATOM 22 N3 A B 8 -0.440 -7.657 30.358 1.00 35.73 N
ATOM 23 C4 A B 8 -0.115 -6.585 31.101 1.00 36.73 C
ATOM 24 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 25 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 26 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 27 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
TER
ATOM 2 P G A 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G A 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G A 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G A 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G A 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G A 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G A 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G A 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G A 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G A 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G A 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G A 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G A 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G A 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G A 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G A 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G A 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G A 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G A 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G A 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G A 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G A 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G A 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A A 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A A 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A A 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A A 19 8.605 -2.308 32.390 1.00 17.52 O
TER
ATOM 1 O3' G B 7 -2.576 -1.553 35.227 1.00 37.15 O
ATOM 2 P A B 8 -1.772 -2.705 36.011 1.00 41.87 P
ATOM 3 OP1 A B 8 -2.329 -2.758 37.390 1.00 43.55 O
ATOM 4 OP2 A B 8 -0.310 -2.453 35.819 1.00 41.69 O
ATOM 5 O5' A B 8 -2.107 -4.048 35.206 1.00 44.57 O
ATOM 6 C5' A B 8 -3.351 -4.756 35.351 1.00 46.32 C
ATOM 7 C4' A B 8 -3.284 -6.064 34.580 1.00 48.82 C
ATOM 8 O4' A B 8 -2.819 -5.733 33.248 1.00 46.52 O
ATOM 9 C3' A B 8 -2.275 -7.073 35.130 1.00 52.27 C
ATOM 10 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 11 C2' A B 8 -1.710 -7.765 33.888 1.00 49.45 C
ATOM 12 O2' A B 8 -2.336 -8.996 33.585 1.00 51.60 O
ATOM 13 C1' A B 8 -1.962 -6.744 32.775 1.00 45.02 C
ATOM 14 N9 A B 8 -0.768 -6.125 32.212 1.00 39.42 N
ATOM 15 C8 A B 8 -0.076 -5.015 32.623 1.00 38.28 C
ATOM 16 N7 A B 8 0.957 -4.731 31.868 1.00 36.56 N
ATOM 17 C5 A B 8 0.938 -5.723 30.899 1.00 35.27 C
ATOM 18 C6 A B 8 1.764 -5.988 29.807 1.00 34.49 C
ATOM 19 N6 A B 8 2.822 -5.244 29.488 1.00 32.94 N
ATOM 20 N1 A B 8 1.467 -7.059 29.038 1.00 33.44 N
ATOM 21 C2 A B 8 0.411 -7.802 29.356 1.00 33.39 C
ATOM 22 N3 A B 8 -0.440 -7.657 30.358 1.00 35.73 N
ATOM 23 C4 A B 8 -0.115 -6.585 31.101 1.00 36.73 C
ATOM 24 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 25 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 26 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 27 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
TER
Atoms:
OP1: (5.947,-7.665,37.248)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
OP1: (-2.329,-2.758,37.390)
OP2: (-0.310,-2.453,35.819)
C3': (-2.275,-7.073,35.130)
C1': (-1.962,-6.744,32.775)
C5': (-3.351,-4.756,35.351)
O4': (-2.819,-5.733,33.248)
C8: (-0.076,-5.015,32.623)
O2': (-2.336,-8.996,33.585)
C6: (1.764,-5.988,29.807)
C5: (0.938,-5.723,30.899)
C4: (-0.115,-6.585,31.101)
P: (-1.772,-2.705,36.011)
C4': (-3.284,-6.064,34.580)
C2': (-1.710,-7.765,33.888)
C2: (0.411,-7.802,29.356)
N1: (1.467,-7.059,29.038)
N3: (-0.440,-7.657,30.358)
N6: (2.822,-5.244,29.488)
N7: (0.957,-4.731,31.868)
N9: (-0.768,-6.125,32.212)
O5': (-2.107,-4.048,35.206)
O3': (-2.838,-8.102,35.977)
OP2: (-0.310,-2.453,35.819)
C3': (-2.275,-7.073,35.130)
C1': (-1.962,-6.744,32.775)
C5': (-3.351,-4.756,35.351)
O4': (-2.819,-5.733,33.248)
C8: (-0.076,-5.015,32.623)
O2': (-2.336,-8.996,33.585)
C6: (1.764,-5.988,29.807)
C5: (0.938,-5.723,30.899)
C4: (-0.115,-6.585,31.101)
P: (-1.772,-2.705,36.011)
C4': (-3.284,-6.064,34.580)
C2': (-1.710,-7.765,33.888)
C2: (0.411,-7.802,29.356)
N1: (1.467,-7.059,29.038)
N3: (-0.440,-7.657,30.358)
N6: (2.822,-5.244,29.488)
N7: (0.957,-4.731,31.868)
N9: (-0.768,-6.125,32.212)
O5': (-2.107,-4.048,35.206)
O3': (-2.838,-8.102,35.977)
Image (generated by PyMOL):