Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1281:A1280
Extra
PDB:
ATOM 1 O3' A A1280 -18.684 -74.682 -4.905 1.00 0.01 O
ATOM 2 P G A1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 3 OP1 G A1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 4 OP2 G A1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 5 O5' G A1281 -19.249 -73.057 -3.149 1.00 0.01 O
ATOM 6 C5' G A1281 -18.827 -71.745 -2.862 1.00 0.01 C
ATOM 7 C4' G A1281 -19.751 -71.074 -1.885 1.00 0.01 C
ATOM 8 O4' G A1281 -21.114 -71.581 -2.045 1.00 0.01 O
ATOM 9 C3' G A1281 -19.399 -71.279 -0.424 1.00 0.01 C
ATOM 10 O3' G A1281 -19.617 -70.072 0.271 1.00 0.01 O
ATOM 11 C2' G A1281 -20.411 -72.315 0.032 1.00 0.01 C
ATOM 12 O2' G A1281 -20.664 -72.310 1.425 1.00 0.01 O
ATOM 13 C1' G A1281 -21.622 -71.894 -0.778 1.00 0.01 C
ATOM 14 N9 G A1281 -22.641 -72.912 -0.915 1.00 0.01 N
ATOM 15 C8 G A1281 -23.919 -72.735 -0.562 1.00 0.01 C
ATOM 16 N7 G A1281 -24.645 -73.772 -0.754 1.00 0.01 N
ATOM 17 C5 G A1281 -23.788 -74.700 -1.264 1.00 0.01 C
ATOM 18 C6 G A1281 -24.025 -76.029 -1.663 1.00 0.01 C
ATOM 19 O6 G A1281 -25.069 -76.670 -1.636 1.00 0.01 O
ATOM 20 N1 G A1281 -22.899 -76.648 -2.125 1.00 0.01 N
ATOM 21 C2 G A1281 -21.700 -76.030 -2.193 1.00 0.01 C
ATOM 22 N2 G A1281 -20.741 -76.792 -2.677 1.00 0.01 N
ATOM 23 N3 G A1281 -21.432 -74.791 -1.838 1.00 0.01 N
ATOM 24 C4 G A1281 -22.536 -74.180 -1.373 1.00 0.01 C
ATOM 25 P C A1282 -18.388 -69.112 0.558 1.00 0.01 P
ATOM 26 OP1 C A1282 -18.919 -67.935 1.278 1.00 0.01 O
ATOM 27 OP2 C A1282 -17.686 -68.911 -0.716 1.00 0.01 O
ATOM 28 O5' C A1282 -17.498 -69.975 1.543 1.00 0.01 O
TER
ATOM 1 O3' A B1279 -19.262 -78.482 -4.488 1.00 0.01 O
ATOM 2 P A B1280 -20.500 -78.899 -5.411 1.00 0.01 P
ATOM 3 OP1 A B1280 -21.554 -79.391 -4.527 1.00 0.01 O
ATOM 4 OP2 A B1280 -19.982 -79.795 -6.479 1.00 0.01 O
ATOM 5 O5' A B1280 -20.935 -77.535 -6.033 1.00 0.01 O
ATOM 6 C5' A B1280 -20.044 -76.820 -6.843 1.00 0.01 C
ATOM 7 C4' A B1280 -20.200 -75.350 -6.640 1.00 0.01 C
ATOM 8 O4' A B1280 -21.511 -74.930 -7.060 1.00 0.01 O
ATOM 9 C3' A B1280 -20.058 -74.872 -5.218 1.00 0.01 C
ATOM 10 O3' A B1280 -18.684 -74.682 -4.905 1.00 0.01 O
ATOM 11 C2' A B1280 -20.895 -73.598 -5.226 1.00 0.01 C
ATOM 12 O2' A B1280 -20.162 -72.533 -5.808 1.00 0.01 O
ATOM 13 C1' A B1280 -22.005 -73.953 -6.208 1.00 0.01 C
ATOM 14 N9 A B1280 -23.222 -74.490 -5.594 1.00 0.01 N
ATOM 15 C8 A B1280 -23.647 -75.745 -5.887 1.00 0.01 C
ATOM 16 N7 A B1280 -24.779 -76.093 -5.362 1.00 0.01 N
ATOM 17 C5 A B1280 -25.170 -74.959 -4.705 1.00 0.01 C
ATOM 18 C6 A B1280 -26.318 -74.699 -3.930 1.00 0.01 C
ATOM 19 N6 A B1280 -27.270 -75.584 -3.692 1.00 0.01 N
ATOM 20 N1 A B1280 -26.453 -73.493 -3.399 1.00 0.01 N
ATOM 21 C2 A B1280 -25.462 -72.627 -3.641 1.00 0.01 C
ATOM 22 N3 A B1280 -24.321 -72.735 -4.341 1.00 0.01 N
ATOM 23 C4 A B1280 -24.233 -73.951 -4.870 1.00 0.01 C
ATOM 24 P G B1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 25 OP1 G B1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 26 OP2 G B1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 27 O5' G B1281 -19.249 -73.057 -3.149 1.00 0.01 O
TER
ATOM 2 P G A1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 3 OP1 G A1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 4 OP2 G A1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 5 O5' G A1281 -19.249 -73.057 -3.149 1.00 0.01 O
ATOM 6 C5' G A1281 -18.827 -71.745 -2.862 1.00 0.01 C
ATOM 7 C4' G A1281 -19.751 -71.074 -1.885 1.00 0.01 C
ATOM 8 O4' G A1281 -21.114 -71.581 -2.045 1.00 0.01 O
ATOM 9 C3' G A1281 -19.399 -71.279 -0.424 1.00 0.01 C
ATOM 10 O3' G A1281 -19.617 -70.072 0.271 1.00 0.01 O
ATOM 11 C2' G A1281 -20.411 -72.315 0.032 1.00 0.01 C
ATOM 12 O2' G A1281 -20.664 -72.310 1.425 1.00 0.01 O
ATOM 13 C1' G A1281 -21.622 -71.894 -0.778 1.00 0.01 C
ATOM 14 N9 G A1281 -22.641 -72.912 -0.915 1.00 0.01 N
ATOM 15 C8 G A1281 -23.919 -72.735 -0.562 1.00 0.01 C
ATOM 16 N7 G A1281 -24.645 -73.772 -0.754 1.00 0.01 N
ATOM 17 C5 G A1281 -23.788 -74.700 -1.264 1.00 0.01 C
ATOM 18 C6 G A1281 -24.025 -76.029 -1.663 1.00 0.01 C
ATOM 19 O6 G A1281 -25.069 -76.670 -1.636 1.00 0.01 O
ATOM 20 N1 G A1281 -22.899 -76.648 -2.125 1.00 0.01 N
ATOM 21 C2 G A1281 -21.700 -76.030 -2.193 1.00 0.01 C
ATOM 22 N2 G A1281 -20.741 -76.792 -2.677 1.00 0.01 N
ATOM 23 N3 G A1281 -21.432 -74.791 -1.838 1.00 0.01 N
ATOM 24 C4 G A1281 -22.536 -74.180 -1.373 1.00 0.01 C
ATOM 25 P C A1282 -18.388 -69.112 0.558 1.00 0.01 P
ATOM 26 OP1 C A1282 -18.919 -67.935 1.278 1.00 0.01 O
ATOM 27 OP2 C A1282 -17.686 -68.911 -0.716 1.00 0.01 O
ATOM 28 O5' C A1282 -17.498 -69.975 1.543 1.00 0.01 O
TER
ATOM 1 O3' A B1279 -19.262 -78.482 -4.488 1.00 0.01 O
ATOM 2 P A B1280 -20.500 -78.899 -5.411 1.00 0.01 P
ATOM 3 OP1 A B1280 -21.554 -79.391 -4.527 1.00 0.01 O
ATOM 4 OP2 A B1280 -19.982 -79.795 -6.479 1.00 0.01 O
ATOM 5 O5' A B1280 -20.935 -77.535 -6.033 1.00 0.01 O
ATOM 6 C5' A B1280 -20.044 -76.820 -6.843 1.00 0.01 C
ATOM 7 C4' A B1280 -20.200 -75.350 -6.640 1.00 0.01 C
ATOM 8 O4' A B1280 -21.511 -74.930 -7.060 1.00 0.01 O
ATOM 9 C3' A B1280 -20.058 -74.872 -5.218 1.00 0.01 C
ATOM 10 O3' A B1280 -18.684 -74.682 -4.905 1.00 0.01 O
ATOM 11 C2' A B1280 -20.895 -73.598 -5.226 1.00 0.01 C
ATOM 12 O2' A B1280 -20.162 -72.533 -5.808 1.00 0.01 O
ATOM 13 C1' A B1280 -22.005 -73.953 -6.208 1.00 0.01 C
ATOM 14 N9 A B1280 -23.222 -74.490 -5.594 1.00 0.01 N
ATOM 15 C8 A B1280 -23.647 -75.745 -5.887 1.00 0.01 C
ATOM 16 N7 A B1280 -24.779 -76.093 -5.362 1.00 0.01 N
ATOM 17 C5 A B1280 -25.170 -74.959 -4.705 1.00 0.01 C
ATOM 18 C6 A B1280 -26.318 -74.699 -3.930 1.00 0.01 C
ATOM 19 N6 A B1280 -27.270 -75.584 -3.692 1.00 0.01 N
ATOM 20 N1 A B1280 -26.453 -73.493 -3.399 1.00 0.01 N
ATOM 21 C2 A B1280 -25.462 -72.627 -3.641 1.00 0.01 C
ATOM 22 N3 A B1280 -24.321 -72.735 -4.341 1.00 0.01 N
ATOM 23 C4 A B1280 -24.233 -73.951 -4.870 1.00 0.01 C
ATOM 24 P G B1281 -18.205 -74.163 -3.491 1.00 0.01 P
ATOM 25 OP1 G B1281 -16.892 -73.547 -3.671 1.00 0.01 O
ATOM 26 OP2 G B1281 -18.345 -75.269 -2.551 1.00 0.01 O
ATOM 27 O5' G B1281 -19.249 -73.057 -3.149 1.00 0.01 O
TER
Atoms:
OP1: (-16.892,-73.547,-3.671)
OP2: (-18.345,-75.269,-2.551)
C3': (-19.399,-71.279,-0.424)
C1': (-21.622,-71.894,-0.778)
C5': (-18.827,-71.745,-2.862)
O6: (-25.069,-76.670,-1.636)
O4': (-21.114,-71.581,-2.045)
C8: (-23.919,-72.735,-0.562)
C2: (-21.700,-76.030,-2.193)
C6: (-24.025,-76.029,-1.663)
C5: (-23.788,-74.700,-1.264)
C4: (-22.536,-74.180,-1.373)
P: (-18.205,-74.163,-3.491)
C4': (-19.751,-71.074,-1.885)
C2': (-20.411,-72.315,0.032)
O2': (-20.664,-72.310,1.425)
N1: (-22.899,-76.648,-2.125)
N2: (-20.741,-76.792,-2.677)
N3: (-21.432,-74.791,-1.838)
N7: (-24.645,-73.772,-0.754)
N9: (-22.641,-72.912,-0.915)
O5': (-19.249,-73.057,-3.149)
O3': (-19.617,-70.072,0.271)
OP2: (-18.345,-75.269,-2.551)
C3': (-19.399,-71.279,-0.424)
C1': (-21.622,-71.894,-0.778)
C5': (-18.827,-71.745,-2.862)
O6: (-25.069,-76.670,-1.636)
O4': (-21.114,-71.581,-2.045)
C8: (-23.919,-72.735,-0.562)
C2: (-21.700,-76.030,-2.193)
C6: (-24.025,-76.029,-1.663)
C5: (-23.788,-74.700,-1.264)
C4: (-22.536,-74.180,-1.373)
P: (-18.205,-74.163,-3.491)
C4': (-19.751,-71.074,-1.885)
C2': (-20.411,-72.315,0.032)
O2': (-20.664,-72.310,1.425)
N1: (-22.899,-76.648,-2.125)
N2: (-20.741,-76.792,-2.677)
N3: (-21.432,-74.791,-1.838)
N7: (-24.645,-73.772,-0.754)
N9: (-22.641,-72.912,-0.915)
O5': (-19.249,-73.057,-3.149)
O3': (-19.617,-70.072,0.271)
OP1: (-21.554,-79.391,-4.527)
OP2: (-19.982,-79.795,-6.479)
C3': (-20.058,-74.872,-5.218)
C1': (-22.005,-73.953,-6.208)
C5': (-20.044,-76.820,-6.843)
O4': (-21.511,-74.930,-7.060)
C8: (-23.647,-75.745,-5.887)
O2': (-20.162,-72.533,-5.808)
C6: (-26.318,-74.699,-3.930)
C5: (-25.170,-74.959,-4.705)
C4: (-24.233,-73.951,-4.870)
P: (-20.500,-78.899,-5.411)
C4': (-20.200,-75.350,-6.640)
C2': (-20.895,-73.598,-5.226)
C2: (-25.462,-72.627,-3.641)
N1: (-26.453,-73.493,-3.399)
N3: (-24.321,-72.735,-4.341)
N6: (-27.270,-75.584,-3.692)
N7: (-24.779,-76.093,-5.362)
N9: (-23.222,-74.490,-5.594)
O5': (-20.935,-77.535,-6.033)
O3': (-18.684,-74.682,-4.905)
OP2: (-19.982,-79.795,-6.479)
C3': (-20.058,-74.872,-5.218)
C1': (-22.005,-73.953,-6.208)
C5': (-20.044,-76.820,-6.843)
O4': (-21.511,-74.930,-7.060)
C8: (-23.647,-75.745,-5.887)
O2': (-20.162,-72.533,-5.808)
C6: (-26.318,-74.699,-3.930)
C5: (-25.170,-74.959,-4.705)
C4: (-24.233,-73.951,-4.870)
P: (-20.500,-78.899,-5.411)
C4': (-20.200,-75.350,-6.640)
C2': (-20.895,-73.598,-5.226)
C2: (-25.462,-72.627,-3.641)
N1: (-26.453,-73.493,-3.399)
N3: (-24.321,-72.735,-4.341)
N6: (-27.270,-75.584,-3.692)
N7: (-24.779,-76.093,-5.362)
N9: (-23.222,-74.490,-5.594)
O5': (-20.935,-77.535,-6.033)
O3': (-18.684,-74.682,-4.905)
Image (generated by PyMOL):