ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A688:A690

Extra

PDB:
ATOM 1 O3' U A 687 -34.005 168.349 172.654 1.00 34.08 O
ATOM 2 P G A 688 -33.527 166.824 172.496 1.00 61.89 P
ATOM 3 OP1 G A 688 -33.031 166.690 171.103 1.00 78.90 O
ATOM 4 OP2 G A 688 -34.589 165.922 173.012 1.00 52.17 O
ATOM 5 O5' G A 688 -32.305 166.696 173.524 1.00 63.88 O
ATOM 6 C5' G A 688 -30.978 166.616 173.041 1.00 65.83 C
ATOM 7 C4' G A 688 -30.077 167.441 173.934 1.00 69.89 C
ATOM 8 O4' G A 688 -30.846 168.255 174.860 1.00 77.46 O
ATOM 9 C3' G A 688 -29.177 166.643 174.851 1.00 58.35 C
ATOM 10 O3' G A 688 -28.097 166.186 174.067 1.00 73.31 O
ATOM 11 C2' G A 688 -28.753 167.759 175.800 1.00 74.32 C
ATOM 12 O2' G A 688 -27.906 168.721 175.183 1.00 88.72 O
ATOM 13 C1' G A 688 -30.115 168.378 176.073 1.00 66.33 C
ATOM 14 N9 G A 688 -30.869 167.703 177.117 1.00 61.95 N
ATOM 15 C8 G A 688 -31.865 166.787 176.919 1.00 68.14 C
ATOM 16 N7 G A 688 -32.391 166.345 178.026 1.00 74.36 N
ATOM 17 C5 G A 688 -31.701 167.011 179.023 1.00 67.69 C
ATOM 18 C6 G A 688 -31.840 166.930 180.424 1.00 63.07 C
ATOM 19 O6 G A 688 -32.619 166.237 181.078 1.00 62.55 O
ATOM 20 N1 G A 688 -30.956 167.767 181.083 1.00 63.89 N
ATOM 21 C2 G A 688 -30.048 168.578 180.454 1.00 62.51 C
ATOM 22 N2 G A 688 -29.275 169.311 181.266 1.00 68.61 N
ATOM 23 N3 G A 688 -29.901 168.670 179.134 1.00 56.57 N
ATOM 24 C4 G A 688 -30.761 167.857 178.481 1.00 62.26 C
ATOM 25 P G A 689 -27.006 165.216 174.715 1.00 62.83 P
ATOM 26 OP1 G A 689 -26.478 165.817 175.980 1.00 49.70 O
ATOM 27 OP2 G A 689 -26.091 164.827 173.610 1.00 83.12 O
ATOM 28 O5' G A 689 -27.904 163.936 175.056 1.00 62.05 O
TER

ATOM 1 O3' G B 689 -29.696 160.535 176.347 1.00 53.28 O
ATOM 2 P A B 690 -31.245 160.630 176.726 1.00 39.72 P
ATOM 3 OP1 A B 690 -31.794 159.250 176.681 1.00 43.29 O
ATOM 4 OP2 A B 690 -31.817 161.698 175.846 1.00 28.85 O
ATOM 5 O5' A B 690 -31.233 161.118 178.257 1.00 43.05 O
ATOM 6 C5' A B 690 -31.194 160.153 179.286 1.00 46.09 C
ATOM 7 C4' A B 690 -31.728 160.731 180.584 1.00 42.49 C
ATOM 8 O4' A B 690 -30.842 161.763 181.080 1.00 44.25 O
ATOM 9 C3' A B 690 -33.116 161.362 180.511 1.00 42.79 C
ATOM 10 O3' A B 690 -33.831 161.124 181.740 1.00 39.22 O
ATOM 11 C2' A B 690 -32.819 162.847 180.296 1.00 54.20 C
ATOM 12 O2' A B 690 -33.820 163.661 180.884 1.00 65.73 O
ATOM 13 C1' A B 690 -31.473 163.031 181.011 1.00 50.62 C
ATOM 14 N9 A B 690 -30.475 163.829 180.321 1.00 41.74 N
ATOM 15 C8 A B 690 -30.251 163.878 178.981 1.00 49.04 C
ATOM 16 N7 A B 690 -29.257 164.662 178.646 1.00 55.16 N
ATOM 17 C5 A B 690 -28.794 165.135 179.856 1.00 47.60 C
ATOM 18 C6 A B 690 -27.749 166.007 180.176 1.00 52.97 C
ATOM 19 N6 A B 690 -26.968 166.562 179.246 1.00 65.22 N
ATOM 20 N1 A B 690 -27.549 166.279 181.478 1.00 49.86 N
ATOM 21 C2 A B 690 -28.346 165.707 182.383 1.00 48.21 C
ATOM 22 N3 A B 690 -29.363 164.872 182.200 1.00 45.41 N
ATOM 23 C4 A B 690 -29.529 164.629 180.899 1.00 42.05 C
ATOM 24 P C B 691 -34.174 159.630 182.207 1.00 53.89 P
ATOM 25 OP1 C B 691 -33.610 158.714 181.187 1.00 63.68 O
ATOM 26 OP2 C B 691 -35.615 159.545 182.537 1.00 58.90 O
ATOM 27 O5' C B 691 -33.356 159.469 183.573 1.00 51.41 O
TER

Atoms:
OP1: (-33.031,166.690,171.103)
OP2: (-34.589,165.922,173.012)
C3': (-29.177,166.643,174.851)
C1': (-30.115,168.378,176.073)
C5': (-30.978,166.616,173.041)
O6: (-32.619,166.237,181.078)
O4': (-30.846,168.255,174.860)
C8: (-31.865,166.787,176.919)
C2: (-30.048,168.578,180.454)
C6: (-31.840,166.930,180.424)
C5: (-31.701,167.011,179.023)
C4: (-30.761,167.857,178.481)
P: (-33.527,166.824,172.496)
C4': (-30.077,167.441,173.934)
C2': (-28.753,167.759,175.800)
O2': (-27.906,168.721,175.183)
N1: (-30.956,167.767,181.083)
N2: (-29.275,169.311,181.266)
N3: (-29.901,168.670,179.134)
N7: (-32.391,166.345,178.026)
N9: (-30.869,167.703,177.117)
O5': (-32.305,166.696,173.524)
O3': (-28.097,166.186,174.067)
OP1: (-31.794,159.250,176.681)
OP2: (-31.817,161.698,175.846)
C3': (-33.116,161.362,180.511)
C1': (-31.473,163.031,181.011)
C5': (-31.194,160.153,179.286)
O4': (-30.842,161.763,181.080)
C8: (-30.251,163.878,178.981)
O2': (-33.820,163.661,180.884)
C6: (-27.749,166.007,180.176)
C5: (-28.794,165.135,179.856)
C4: (-29.529,164.629,180.899)
P: (-31.245,160.630,176.726)
C4': (-31.728,160.731,180.584)
C2': (-32.819,162.847,180.296)
C2: (-28.346,165.707,182.383)
N1: (-27.549,166.279,181.478)
N3: (-29.363,164.872,182.200)
N6: (-26.968,166.562,179.246)
N7: (-29.257,164.662,178.646)
N9: (-30.475,163.829,180.321)
O5': (-31.233,161.118,178.257)
O3': (-33.831,161.124,181.740)
Image (generated by PyMOL):
PyMOL image
show in jmol