ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1297:A1298

Extra

PDB:
ATOM 1 O3' G A1296 23.809 -39.502 -34.297 1.00 39.63 O
ATOM 2 P G A1297 23.126 -38.492 -35.353 1.00 44.47 P
ATOM 3 OP1 G A1297 24.184 -37.552 -35.804 1.00 47.74 O
ATOM 4 OP2 G A1297 21.909 -37.925 -34.710 1.00 41.16 O
ATOM 5 O5' G A1297 22.720 -39.455 -36.552 1.00 27.90 O
ATOM 6 C5' G A1297 23.698 -39.891 -37.458 1.00 30.36 C
ATOM 7 C4' G A1297 23.125 -40.726 -38.557 1.00 26.83 C
ATOM 8 O4' G A1297 22.410 -41.855 -38.003 1.00 42.33 O
ATOM 9 C3' G A1297 22.106 -40.068 -39.447 1.00 27.08 C
ATOM 10 O3' G A1297 22.668 -39.169 -40.389 1.00 32.99 O
ATOM 11 C2' G A1297 21.440 -41.283 -40.076 1.00 41.53 C
ATOM 12 O2' G A1297 22.289 -41.886 -41.037 1.00 33.34 O
ATOM 13 C1' G A1297 21.353 -42.211 -38.875 1.00 39.94 C
ATOM 14 N9 G A1297 20.076 -42.040 -38.169 1.00 34.84 N
ATOM 15 C8 G A1297 19.850 -41.398 -36.996 1.00 38.51 C
ATOM 16 N7 G A1297 18.606 -41.410 -36.643 1.00 45.37 N
ATOM 17 C5 G A1297 17.980 -42.086 -37.666 1.00 47.56 C
ATOM 18 C6 G A1297 16.620 -42.408 -37.844 1.00 48.94 C
ATOM 19 O6 G A1297 15.687 -42.130 -37.085 1.00 52.02 O
ATOM 20 N1 G A1297 16.408 -43.116 -39.025 1.00 46.40 N
ATOM 21 C2 G A1297 17.390 -43.464 -39.913 1.00 41.71 C
ATOM 22 N2 G A1297 17.028 -44.151 -40.994 1.00 38.63 N
ATOM 23 N3 G A1297 18.655 -43.157 -39.756 1.00 47.42 N
ATOM 24 C4 G A1297 18.873 -42.474 -38.620 1.00 44.17 C
ATOM 25 P A A1298 22.011 -37.703 -40.611 1.00 39.60 P
ATOM 26 OP1 A A1298 23.126 -36.752 -40.849 1.00 51.83 O
ATOM 27 OP2 A A1298 21.095 -37.456 -39.469 1.00 45.62 O
ATOM 28 O5' A A1298 21.168 -37.895 -41.939 1.00 35.48 O
TER

ATOM 1 O3' G B1297 22.668 -39.169 -40.389 1.00 32.99 O
ATOM 2 P A B1298 22.011 -37.703 -40.611 1.00 39.60 P
ATOM 3 OP1 A B1298 23.126 -36.752 -40.849 1.00 51.83 O
ATOM 4 OP2 A B1298 21.095 -37.456 -39.469 1.00 45.62 O
ATOM 5 O5' A B1298 21.168 -37.895 -41.939 1.00 35.48 O
ATOM 6 C5' A B1298 20.855 -39.193 -42.391 1.00 45.06 C
ATOM 7 C4' A B1298 19.705 -39.206 -43.349 1.00 41.82 C
ATOM 8 O4' A B1298 18.812 -40.287 -43.022 1.00 44.94 O
ATOM 9 C3' A B1298 18.781 -38.019 -43.329 1.00 45.24 C
ATOM 10 O3' A B1298 19.332 -36.873 -43.925 1.00 40.43 O
ATOM 11 C2' A B1298 17.594 -38.566 -44.093 1.00 45.80 C
ATOM 12 O2' A B1298 17.881 -38.591 -45.491 1.00 46.27 O
ATOM 13 C1' A B1298 17.555 -40.010 -43.584 1.00 53.63 C
ATOM 14 N9 A B1298 16.486 -40.233 -42.585 1.00 70.60 N
ATOM 15 C8 A B1298 15.245 -40.808 -42.849 1.00 75.90 C
ATOM 16 N7 A B1298 14.410 -40.886 -41.841 1.00 56.89 N
ATOM 17 C5 A B1298 15.167 -40.308 -40.848 1.00 64.25 C
ATOM 18 C6 A B1298 14.835 -40.098 -39.526 1.00 73.08 C
ATOM 19 N6 A B1298 13.643 -40.464 -39.052 1.00 74.58 N
ATOM 20 N1 A B1298 15.774 -39.499 -38.749 1.00 80.65 N
ATOM 21 C2 A B1298 16.957 -39.154 -39.310 1.00 78.21 C
ATOM 22 N3 A B1298 17.396 -39.308 -40.564 1.00 57.44 N
ATOM 23 C4 A B1298 16.432 -39.895 -41.272 1.00 60.90 C
ATOM 24 P C B1299 18.487 -35.512 -43.950 1.00 45.36 P
ATOM 25 OP1 C B1299 17.090 -35.866 -44.237 1.00 50.79 O
ATOM 26 OP2 C B1299 19.181 -34.585 -44.866 1.00 37.17 O
ATOM 27 O5' C B1299 18.601 -34.997 -42.449 1.00 49.29 O
TER

Atoms:
OP1: (24.184,-37.552,-35.804)
OP2: (21.909,-37.925,-34.710)
C3': (22.106,-40.068,-39.447)
C1': (21.353,-42.211,-38.875)
C5': (23.698,-39.891,-37.458)
O6: (15.687,-42.130,-37.085)
O4': (22.410,-41.855,-38.003)
C8: (19.850,-41.398,-36.996)
C2: (17.390,-43.464,-39.913)
C6: (16.620,-42.408,-37.844)
C5: (17.980,-42.086,-37.666)
C4: (18.873,-42.474,-38.620)
P: (23.126,-38.492,-35.353)
C4': (23.125,-40.726,-38.557)
C2': (21.440,-41.283,-40.076)
O2': (22.289,-41.886,-41.037)
N1: (16.408,-43.116,-39.025)
N2: (17.028,-44.151,-40.994)
N3: (18.655,-43.157,-39.756)
N7: (18.606,-41.410,-36.643)
N9: (20.076,-42.040,-38.169)
O5': (22.720,-39.455,-36.552)
O3': (22.668,-39.169,-40.389)
OP1: (23.126,-36.752,-40.849)
OP2: (21.095,-37.456,-39.469)
C3': (18.781,-38.019,-43.329)
C1': (17.555,-40.010,-43.584)
C5': (20.855,-39.193,-42.391)
O4': (18.812,-40.287,-43.022)
C8: (15.245,-40.808,-42.849)
O2': (17.881,-38.591,-45.491)
C6: (14.835,-40.098,-39.526)
C5: (15.167,-40.308,-40.848)
C4: (16.432,-39.895,-41.272)
P: (22.011,-37.703,-40.611)
C4': (19.705,-39.206,-43.349)
C2': (17.594,-38.566,-44.093)
C2: (16.957,-39.154,-39.310)
N1: (15.774,-39.499,-38.749)
N3: (17.396,-39.308,-40.564)
N6: (13.643,-40.464,-39.052)
N7: (14.410,-40.886,-41.841)
N9: (16.486,-40.233,-42.585)
O5': (21.168,-37.895,-41.939)
O3': (19.332,-36.873,-43.925)
Image (generated by PyMOL):
PyMOL image
show in jmol