Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:046:049
Extra
PDB:
ATOM 1 O3' U A 45 55.016 165.220 36.029 1.00 50.66 O
ATOM 2 P G A 46 54.041 166.160 36.898 1.00 51.15 P
ATOM 3 OP1 G A 46 53.744 167.353 36.069 1.00 53.53 O
ATOM 4 OP2 G A 46 54.599 166.335 38.255 1.00 50.84 O
ATOM 5 O5' G A 46 52.700 165.314 37.005 1.00 52.34 O
ATOM 6 C5' G A 46 52.009 164.907 35.818 1.00 51.24 C
ATOM 7 C4' G A 46 50.524 164.897 36.054 1.00 51.19 C
ATOM 8 O4' G A 46 50.188 163.777 36.920 1.00 53.04 O
ATOM 9 C3' G A 46 49.937 166.142 36.719 1.00 52.03 C
ATOM 10 O3' G A 46 48.642 166.380 36.171 1.00 54.62 O
ATOM 11 C2' G A 46 49.790 165.692 38.173 1.00 50.82 C
ATOM 12 O2' G A 46 48.797 166.394 38.887 1.00 47.52 O
ATOM 13 C1' G A 46 49.370 164.237 37.974 1.00 51.97 C
ATOM 14 N9 G A 46 49.504 163.327 39.111 1.00 53.52 N
ATOM 15 C8 G A 46 50.216 163.524 40.276 1.00 52.16 C
ATOM 16 N7 G A 46 50.131 162.519 41.106 1.00 52.09 N
ATOM 17 C5 G A 46 49.317 161.601 40.453 1.00 53.00 C
ATOM 18 C6 G A 46 48.873 160.313 40.856 1.00 51.66 C
ATOM 19 O6 G A 46 49.124 159.704 41.894 1.00 49.06 O
ATOM 20 N1 G A 46 48.059 159.727 39.890 1.00 52.89 N
ATOM 21 C2 G A 46 47.724 160.297 38.687 1.00 51.71 C
ATOM 22 N2 G A 46 46.933 159.569 37.889 1.00 51.05 N
ATOM 23 N3 G A 46 48.137 161.490 38.297 1.00 52.49 N
ATOM 24 C4 G A 46 48.922 162.083 39.221 1.00 52.79 C
ATOM 25 P C A 47 48.292 167.812 35.526 1.00 56.62 P
ATOM 26 OP1 C A 47 46.876 167.777 35.078 1.00 57.85 O
ATOM 27 OP2 C A 47 49.365 168.117 34.542 1.00 54.93 O
ATOM 28 O5' C A 47 48.369 168.824 36.751 1.00 55.09 O
TER
ATOM 1 O3' C B 48 48.910 169.723 45.491 1.00 69.89 O
ATOM 2 P A B 49 50.259 168.856 45.351 1.00 70.16 P
ATOM 3 OP1 A B 49 51.049 169.047 46.599 1.00 70.66 O
ATOM 4 OP2 A B 49 50.887 169.150 44.030 1.00 70.54 O
ATOM 5 O5' A B 49 49.736 167.354 45.309 1.00 67.68 O
ATOM 6 C5' A B 49 49.178 166.740 46.475 1.00 62.50 C
ATOM 7 C4' A B 49 49.286 165.242 46.375 1.00 60.00 C
ATOM 8 O4' A B 49 48.197 164.731 45.556 1.00 57.57 O
ATOM 9 C3' A B 49 50.582 164.702 45.760 1.00 58.20 C
ATOM 10 O3' A B 49 51.129 163.673 46.578 1.00 57.20 O
ATOM 11 C2' A B 49 50.114 164.140 44.412 1.00 58.14 C
ATOM 12 O2' A B 49 50.879 163.050 43.927 1.00 56.96 O
ATOM 13 C1' A B 49 48.694 163.690 44.747 1.00 57.72 C
ATOM 14 N9 A B 49 47.816 163.529 43.585 1.00 57.10 N
ATOM 15 C8 A B 49 47.629 164.392 42.531 1.00 56.01 C
ATOM 16 N7 A B 49 46.798 163.944 41.621 1.00 56.22 N
ATOM 17 C5 A B 49 46.403 162.707 42.110 1.00 55.97 C
ATOM 18 C6 A B 49 45.543 161.724 41.600 1.00 54.52 C
ATOM 19 N6 A B 49 44.910 161.831 40.433 1.00 55.37 N
ATOM 20 N1 A B 49 45.361 160.606 42.335 1.00 53.58 N
ATOM 21 C2 A B 49 46.014 160.488 43.495 1.00 52.87 C
ATOM 22 N3 A B 49 46.858 161.336 44.075 1.00 54.75 N
ATOM 23 C4 A B 49 47.012 162.442 43.324 1.00 56.21 C
ATOM 24 P A B 50 52.654 163.792 47.089 1.00 56.87 P
ATOM 25 OP1 A B 50 52.716 164.895 48.074 1.00 57.99 O
ATOM 26 OP2 A B 50 53.563 163.811 45.913 1.00 57.30 O
ATOM 27 O5' A B 50 52.885 162.420 47.858 1.00 55.48 O
TER
ATOM 2 P G A 46 54.041 166.160 36.898 1.00 51.15 P
ATOM 3 OP1 G A 46 53.744 167.353 36.069 1.00 53.53 O
ATOM 4 OP2 G A 46 54.599 166.335 38.255 1.00 50.84 O
ATOM 5 O5' G A 46 52.700 165.314 37.005 1.00 52.34 O
ATOM 6 C5' G A 46 52.009 164.907 35.818 1.00 51.24 C
ATOM 7 C4' G A 46 50.524 164.897 36.054 1.00 51.19 C
ATOM 8 O4' G A 46 50.188 163.777 36.920 1.00 53.04 O
ATOM 9 C3' G A 46 49.937 166.142 36.719 1.00 52.03 C
ATOM 10 O3' G A 46 48.642 166.380 36.171 1.00 54.62 O
ATOM 11 C2' G A 46 49.790 165.692 38.173 1.00 50.82 C
ATOM 12 O2' G A 46 48.797 166.394 38.887 1.00 47.52 O
ATOM 13 C1' G A 46 49.370 164.237 37.974 1.00 51.97 C
ATOM 14 N9 G A 46 49.504 163.327 39.111 1.00 53.52 N
ATOM 15 C8 G A 46 50.216 163.524 40.276 1.00 52.16 C
ATOM 16 N7 G A 46 50.131 162.519 41.106 1.00 52.09 N
ATOM 17 C5 G A 46 49.317 161.601 40.453 1.00 53.00 C
ATOM 18 C6 G A 46 48.873 160.313 40.856 1.00 51.66 C
ATOM 19 O6 G A 46 49.124 159.704 41.894 1.00 49.06 O
ATOM 20 N1 G A 46 48.059 159.727 39.890 1.00 52.89 N
ATOM 21 C2 G A 46 47.724 160.297 38.687 1.00 51.71 C
ATOM 22 N2 G A 46 46.933 159.569 37.889 1.00 51.05 N
ATOM 23 N3 G A 46 48.137 161.490 38.297 1.00 52.49 N
ATOM 24 C4 G A 46 48.922 162.083 39.221 1.00 52.79 C
ATOM 25 P C A 47 48.292 167.812 35.526 1.00 56.62 P
ATOM 26 OP1 C A 47 46.876 167.777 35.078 1.00 57.85 O
ATOM 27 OP2 C A 47 49.365 168.117 34.542 1.00 54.93 O
ATOM 28 O5' C A 47 48.369 168.824 36.751 1.00 55.09 O
TER
ATOM 1 O3' C B 48 48.910 169.723 45.491 1.00 69.89 O
ATOM 2 P A B 49 50.259 168.856 45.351 1.00 70.16 P
ATOM 3 OP1 A B 49 51.049 169.047 46.599 1.00 70.66 O
ATOM 4 OP2 A B 49 50.887 169.150 44.030 1.00 70.54 O
ATOM 5 O5' A B 49 49.736 167.354 45.309 1.00 67.68 O
ATOM 6 C5' A B 49 49.178 166.740 46.475 1.00 62.50 C
ATOM 7 C4' A B 49 49.286 165.242 46.375 1.00 60.00 C
ATOM 8 O4' A B 49 48.197 164.731 45.556 1.00 57.57 O
ATOM 9 C3' A B 49 50.582 164.702 45.760 1.00 58.20 C
ATOM 10 O3' A B 49 51.129 163.673 46.578 1.00 57.20 O
ATOM 11 C2' A B 49 50.114 164.140 44.412 1.00 58.14 C
ATOM 12 O2' A B 49 50.879 163.050 43.927 1.00 56.96 O
ATOM 13 C1' A B 49 48.694 163.690 44.747 1.00 57.72 C
ATOM 14 N9 A B 49 47.816 163.529 43.585 1.00 57.10 N
ATOM 15 C8 A B 49 47.629 164.392 42.531 1.00 56.01 C
ATOM 16 N7 A B 49 46.798 163.944 41.621 1.00 56.22 N
ATOM 17 C5 A B 49 46.403 162.707 42.110 1.00 55.97 C
ATOM 18 C6 A B 49 45.543 161.724 41.600 1.00 54.52 C
ATOM 19 N6 A B 49 44.910 161.831 40.433 1.00 55.37 N
ATOM 20 N1 A B 49 45.361 160.606 42.335 1.00 53.58 N
ATOM 21 C2 A B 49 46.014 160.488 43.495 1.00 52.87 C
ATOM 22 N3 A B 49 46.858 161.336 44.075 1.00 54.75 N
ATOM 23 C4 A B 49 47.012 162.442 43.324 1.00 56.21 C
ATOM 24 P A B 50 52.654 163.792 47.089 1.00 56.87 P
ATOM 25 OP1 A B 50 52.716 164.895 48.074 1.00 57.99 O
ATOM 26 OP2 A B 50 53.563 163.811 45.913 1.00 57.30 O
ATOM 27 O5' A B 50 52.885 162.420 47.858 1.00 55.48 O
TER
Atoms:
OP1: (53.744,167.353,36.069)
OP2: (54.599,166.335,38.255)
C3': (49.937,166.142,36.719)
C1': (49.370,164.237,37.974)
C5': (52.009,164.907,35.818)
O6: (49.124,159.704,41.894)
O4': (50.188,163.777,36.920)
C8: (50.216,163.524,40.276)
C2: (47.724,160.297,38.687)
C6: (48.873,160.313,40.856)
C5: (49.317,161.601,40.453)
C4: (48.922,162.083,39.221)
P: (54.041,166.160,36.898)
C4': (50.524,164.897,36.054)
C2': (49.790,165.692,38.173)
O2': (48.797,166.394,38.887)
N1: (48.059,159.727,39.890)
N2: (46.933,159.569,37.889)
N3: (48.137,161.490,38.297)
N7: (50.131,162.519,41.106)
N9: (49.504,163.327,39.111)
O5': (52.700,165.314,37.005)
O3': (48.642,166.380,36.171)
OP2: (54.599,166.335,38.255)
C3': (49.937,166.142,36.719)
C1': (49.370,164.237,37.974)
C5': (52.009,164.907,35.818)
O6: (49.124,159.704,41.894)
O4': (50.188,163.777,36.920)
C8: (50.216,163.524,40.276)
C2: (47.724,160.297,38.687)
C6: (48.873,160.313,40.856)
C5: (49.317,161.601,40.453)
C4: (48.922,162.083,39.221)
P: (54.041,166.160,36.898)
C4': (50.524,164.897,36.054)
C2': (49.790,165.692,38.173)
O2': (48.797,166.394,38.887)
N1: (48.059,159.727,39.890)
N2: (46.933,159.569,37.889)
N3: (48.137,161.490,38.297)
N7: (50.131,162.519,41.106)
N9: (49.504,163.327,39.111)
O5': (52.700,165.314,37.005)
O3': (48.642,166.380,36.171)
OP1: (51.049,169.047,46.599)
OP2: (50.887,169.150,44.030)
C3': (50.582,164.702,45.760)
C1': (48.694,163.690,44.747)
C5': (49.178,166.740,46.475)
O4': (48.197,164.731,45.556)
C8: (47.629,164.392,42.531)
O2': (50.879,163.050,43.927)
C6: (45.543,161.724,41.600)
C5: (46.403,162.707,42.110)
C4: (47.012,162.442,43.324)
P: (50.259,168.856,45.351)
C4': (49.286,165.242,46.375)
C2': (50.114,164.140,44.412)
C2: (46.014,160.488,43.495)
N1: (45.361,160.606,42.335)
N3: (46.858,161.336,44.075)
N6: (44.910,161.831,40.433)
N7: (46.798,163.944,41.621)
N9: (47.816,163.529,43.585)
O5': (49.736,167.354,45.309)
O3': (51.129,163.673,46.578)
OP2: (50.887,169.150,44.030)
C3': (50.582,164.702,45.760)
C1': (48.694,163.690,44.747)
C5': (49.178,166.740,46.475)
O4': (48.197,164.731,45.556)
C8: (47.629,164.392,42.531)
O2': (50.879,163.050,43.927)
C6: (45.543,161.724,41.600)
C5: (46.403,162.707,42.110)
C4: (47.012,162.442,43.324)
P: (50.259,168.856,45.351)
C4': (49.286,165.242,46.375)
C2': (50.114,164.140,44.412)
C2: (46.014,160.488,43.495)
N1: (45.361,160.606,42.335)
N3: (46.858,161.336,44.075)
N6: (44.910,161.831,40.433)
N7: (46.798,163.944,41.621)
N9: (47.816,163.529,43.585)
O5': (49.736,167.354,45.309)
O3': (51.129,163.673,46.578)
Image (generated by PyMOL):