Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A42:A67
Extra
PDB:
ATOM 1 O3' G A 41 -9.815 -52.933 13.061 1.00 20.39 O
ATOM 2 P A A 42 -8.472 -52.290 13.633 1.00 18.63 P
ATOM 3 OP1 A A 42 -7.359 -53.250 13.526 1.00 17.13 O
ATOM 4 OP2 A A 42 -8.789 -51.674 14.946 1.00 20.14 O
ATOM 5 O5' A A 42 -8.228 -51.085 12.655 1.00 19.40 O
ATOM 6 C5' A A 42 -7.361 -51.226 11.580 1.00 20.53 C
ATOM 7 C4' A A 42 -6.742 -49.911 11.291 1.00 20.73 C
ATOM 8 O4' A A 42 -6.222 -49.381 12.530 1.00 20.59 O
ATOM 9 C3' A A 42 -5.609 -49.978 10.293 1.00 21.36 C
ATOM 10 O3' A A 42 -5.781 -48.932 9.373 1.00 21.09 O
ATOM 11 C2' A A 42 -4.355 -49.881 11.155 1.00 21.80 C
ATOM 12 O2' A A 42 -3.309 -49.171 10.517 1.00 23.33 O
ATOM 13 C1' A A 42 -4.847 -49.132 12.397 1.00 21.76 C
ATOM 14 N9 A A 42 -4.181 -49.588 13.623 1.00 23.15 N
ATOM 15 C8 A A 42 -3.794 -50.868 13.959 1.00 21.82 C
ATOM 16 N7 A A 42 -3.134 -50.941 15.088 1.00 22.02 N
ATOM 17 C5 A A 42 -3.098 -49.630 15.540 1.00 22.74 C
ATOM 18 C6 A A 42 -2.535 -49.038 16.684 1.00 22.78 C
ATOM 19 N6 A A 42 -1.840 -49.709 17.603 1.00 23.32 N
ATOM 20 N1 A A 42 -2.706 -47.710 16.850 1.00 24.19 N
ATOM 21 C2 A A 42 -3.389 -47.028 15.920 1.00 23.93 C
ATOM 22 N3 A A 42 -3.953 -47.465 14.800 1.00 23.20 N
ATOM 23 C4 A A 42 -3.767 -48.790 14.664 1.00 23.42 C
ATOM 24 P A A 43 -6.800 -49.136 8.153 1.00 22.36 P
ATOM 25 OP1 A A 43 -6.846 -50.576 7.784 1.00 22.50 O
ATOM 26 OP2 A A 43 -6.461 -48.113 7.124 1.00 21.50 O
ATOM 27 O5' A A 43 -8.223 -48.787 8.770 1.00 21.98 O
TER
ATOM 1 O3' C B 66 2.539 -54.783 23.236 1.00 25.18 O
ATOM 2 P A B 67 3.356 -53.409 23.422 1.00 24.60 P
ATOM 3 OP1 A B 67 4.671 -53.479 22.731 1.00 23.80 O
ATOM 4 OP2 A B 67 3.303 -53.110 24.874 1.00 25.75 O
ATOM 5 O5' A B 67 2.477 -52.315 22.676 1.00 23.67 O
ATOM 6 C5' A B 67 1.166 -51.985 23.151 1.00 23.71 C
ATOM 7 C4' A B 67 1.200 -50.708 23.965 1.00 22.98 C
ATOM 8 O4' A B 67 1.644 -49.598 23.140 1.00 22.92 O
ATOM 9 C3' A B 67 -0.169 -50.290 24.472 1.00 23.07 C
ATOM 10 O3' A B 67 -0.451 -50.933 25.707 1.00 23.10 O
ATOM 11 C2' A B 67 -0.034 -48.784 24.618 1.00 23.11 C
ATOM 12 O2' A B 67 0.597 -48.451 25.833 1.00 23.71 O
ATOM 13 C1' A B 67 0.893 -48.435 23.449 1.00 23.21 C
ATOM 14 N9 A B 67 0.176 -48.020 22.236 1.00 23.14 N
ATOM 15 C8 A B 67 -0.089 -48.794 21.136 1.00 23.39 C
ATOM 16 N7 A B 67 -0.755 -48.173 20.199 1.00 23.54 N
ATOM 17 C5 A B 67 -0.940 -46.901 20.710 1.00 21.83 C
ATOM 18 C6 A B 67 -1.566 -45.767 20.189 1.00 22.04 C
ATOM 19 N6 A B 67 -2.149 -45.733 18.986 1.00 20.30 N
ATOM 20 N1 A B 67 -1.575 -44.649 20.949 1.00 23.47 N
ATOM 21 C2 A B 67 -0.989 -44.686 22.148 1.00 21.84 C
ATOM 22 N3 A B 67 -0.367 -45.695 22.746 1.00 23.69 N
ATOM 23 C4 A B 67 -0.375 -46.789 21.964 1.00 22.71 C
ATOM 24 P G B 68 -1.953 -51.408 26.040 1.00 22.84 P
ATOM 25 OP1 G B 68 -1.957 -51.971 27.414 1.00 23.77 O
ATOM 26 OP2 G B 68 -2.461 -52.222 24.916 1.00 20.88 O
ATOM 27 O5' G B 68 -2.768 -50.046 26.070 1.00 22.60 O
TER
ATOM 2 P A A 42 -8.472 -52.290 13.633 1.00 18.63 P
ATOM 3 OP1 A A 42 -7.359 -53.250 13.526 1.00 17.13 O
ATOM 4 OP2 A A 42 -8.789 -51.674 14.946 1.00 20.14 O
ATOM 5 O5' A A 42 -8.228 -51.085 12.655 1.00 19.40 O
ATOM 6 C5' A A 42 -7.361 -51.226 11.580 1.00 20.53 C
ATOM 7 C4' A A 42 -6.742 -49.911 11.291 1.00 20.73 C
ATOM 8 O4' A A 42 -6.222 -49.381 12.530 1.00 20.59 O
ATOM 9 C3' A A 42 -5.609 -49.978 10.293 1.00 21.36 C
ATOM 10 O3' A A 42 -5.781 -48.932 9.373 1.00 21.09 O
ATOM 11 C2' A A 42 -4.355 -49.881 11.155 1.00 21.80 C
ATOM 12 O2' A A 42 -3.309 -49.171 10.517 1.00 23.33 O
ATOM 13 C1' A A 42 -4.847 -49.132 12.397 1.00 21.76 C
ATOM 14 N9 A A 42 -4.181 -49.588 13.623 1.00 23.15 N
ATOM 15 C8 A A 42 -3.794 -50.868 13.959 1.00 21.82 C
ATOM 16 N7 A A 42 -3.134 -50.941 15.088 1.00 22.02 N
ATOM 17 C5 A A 42 -3.098 -49.630 15.540 1.00 22.74 C
ATOM 18 C6 A A 42 -2.535 -49.038 16.684 1.00 22.78 C
ATOM 19 N6 A A 42 -1.840 -49.709 17.603 1.00 23.32 N
ATOM 20 N1 A A 42 -2.706 -47.710 16.850 1.00 24.19 N
ATOM 21 C2 A A 42 -3.389 -47.028 15.920 1.00 23.93 C
ATOM 22 N3 A A 42 -3.953 -47.465 14.800 1.00 23.20 N
ATOM 23 C4 A A 42 -3.767 -48.790 14.664 1.00 23.42 C
ATOM 24 P A A 43 -6.800 -49.136 8.153 1.00 22.36 P
ATOM 25 OP1 A A 43 -6.846 -50.576 7.784 1.00 22.50 O
ATOM 26 OP2 A A 43 -6.461 -48.113 7.124 1.00 21.50 O
ATOM 27 O5' A A 43 -8.223 -48.787 8.770 1.00 21.98 O
TER
ATOM 1 O3' C B 66 2.539 -54.783 23.236 1.00 25.18 O
ATOM 2 P A B 67 3.356 -53.409 23.422 1.00 24.60 P
ATOM 3 OP1 A B 67 4.671 -53.479 22.731 1.00 23.80 O
ATOM 4 OP2 A B 67 3.303 -53.110 24.874 1.00 25.75 O
ATOM 5 O5' A B 67 2.477 -52.315 22.676 1.00 23.67 O
ATOM 6 C5' A B 67 1.166 -51.985 23.151 1.00 23.71 C
ATOM 7 C4' A B 67 1.200 -50.708 23.965 1.00 22.98 C
ATOM 8 O4' A B 67 1.644 -49.598 23.140 1.00 22.92 O
ATOM 9 C3' A B 67 -0.169 -50.290 24.472 1.00 23.07 C
ATOM 10 O3' A B 67 -0.451 -50.933 25.707 1.00 23.10 O
ATOM 11 C2' A B 67 -0.034 -48.784 24.618 1.00 23.11 C
ATOM 12 O2' A B 67 0.597 -48.451 25.833 1.00 23.71 O
ATOM 13 C1' A B 67 0.893 -48.435 23.449 1.00 23.21 C
ATOM 14 N9 A B 67 0.176 -48.020 22.236 1.00 23.14 N
ATOM 15 C8 A B 67 -0.089 -48.794 21.136 1.00 23.39 C
ATOM 16 N7 A B 67 -0.755 -48.173 20.199 1.00 23.54 N
ATOM 17 C5 A B 67 -0.940 -46.901 20.710 1.00 21.83 C
ATOM 18 C6 A B 67 -1.566 -45.767 20.189 1.00 22.04 C
ATOM 19 N6 A B 67 -2.149 -45.733 18.986 1.00 20.30 N
ATOM 20 N1 A B 67 -1.575 -44.649 20.949 1.00 23.47 N
ATOM 21 C2 A B 67 -0.989 -44.686 22.148 1.00 21.84 C
ATOM 22 N3 A B 67 -0.367 -45.695 22.746 1.00 23.69 N
ATOM 23 C4 A B 67 -0.375 -46.789 21.964 1.00 22.71 C
ATOM 24 P G B 68 -1.953 -51.408 26.040 1.00 22.84 P
ATOM 25 OP1 G B 68 -1.957 -51.971 27.414 1.00 23.77 O
ATOM 26 OP2 G B 68 -2.461 -52.222 24.916 1.00 20.88 O
ATOM 27 O5' G B 68 -2.768 -50.046 26.070 1.00 22.60 O
TER
Atoms:
OP1: (-7.359,-53.250,13.526)
OP2: (-8.789,-51.674,14.946)
C3': (-5.609,-49.978,10.293)
C1': (-4.847,-49.132,12.397)
C5': (-7.361,-51.226,11.580)
O4': (-6.222,-49.381,12.530)
C8: (-3.794,-50.868,13.959)
O2': (-3.309,-49.171,10.517)
C6: (-2.535,-49.038,16.684)
C5: (-3.098,-49.630,15.540)
C4: (-3.767,-48.790,14.664)
P: (-8.472,-52.290,13.633)
C4': (-6.742,-49.911,11.291)
C2': (-4.355,-49.881,11.155)
C2: (-3.389,-47.028,15.920)
N1: (-2.706,-47.710,16.850)
N3: (-3.953,-47.465,14.800)
N6: (-1.840,-49.709,17.603)
N7: (-3.134,-50.941,15.088)
N9: (-4.181,-49.588,13.623)
O5': (-8.228,-51.085,12.655)
O3': (-5.781,-48.932,9.373)
OP2: (-8.789,-51.674,14.946)
C3': (-5.609,-49.978,10.293)
C1': (-4.847,-49.132,12.397)
C5': (-7.361,-51.226,11.580)
O4': (-6.222,-49.381,12.530)
C8: (-3.794,-50.868,13.959)
O2': (-3.309,-49.171,10.517)
C6: (-2.535,-49.038,16.684)
C5: (-3.098,-49.630,15.540)
C4: (-3.767,-48.790,14.664)
P: (-8.472,-52.290,13.633)
C4': (-6.742,-49.911,11.291)
C2': (-4.355,-49.881,11.155)
C2: (-3.389,-47.028,15.920)
N1: (-2.706,-47.710,16.850)
N3: (-3.953,-47.465,14.800)
N6: (-1.840,-49.709,17.603)
N7: (-3.134,-50.941,15.088)
N9: (-4.181,-49.588,13.623)
O5': (-8.228,-51.085,12.655)
O3': (-5.781,-48.932,9.373)
OP1: (4.671,-53.479,22.731)
OP2: (3.303,-53.110,24.874)
C3': (-0.169,-50.290,24.472)
C1': (0.893,-48.435,23.449)
C5': (1.166,-51.985,23.151)
O4': (1.644,-49.598,23.140)
C8: (-0.089,-48.794,21.136)
O2': (0.597,-48.451,25.833)
C6: (-1.566,-45.767,20.189)
C5: (-0.940,-46.901,20.710)
C4: (-0.375,-46.789,21.964)
P: (3.356,-53.409,23.422)
C4': (1.200,-50.708,23.965)
C2': (-0.034,-48.784,24.618)
C2: (-0.989,-44.686,22.148)
N1: (-1.575,-44.649,20.949)
N3: (-0.367,-45.695,22.746)
N6: (-2.149,-45.733,18.986)
N7: (-0.755,-48.173,20.199)
N9: (0.176,-48.020,22.236)
O5': (2.477,-52.315,22.676)
O3': (-0.451,-50.933,25.707)
OP2: (3.303,-53.110,24.874)
C3': (-0.169,-50.290,24.472)
C1': (0.893,-48.435,23.449)
C5': (1.166,-51.985,23.151)
O4': (1.644,-49.598,23.140)
C8: (-0.089,-48.794,21.136)
O2': (0.597,-48.451,25.833)
C6: (-1.566,-45.767,20.189)
C5: (-0.940,-46.901,20.710)
C4: (-0.375,-46.789,21.964)
P: (3.356,-53.409,23.422)
C4': (1.200,-50.708,23.965)
C2': (-0.034,-48.784,24.618)
C2: (-0.989,-44.686,22.148)
N1: (-1.575,-44.649,20.949)
N3: (-0.367,-45.695,22.746)
N6: (-2.149,-45.733,18.986)
N7: (-0.755,-48.173,20.199)
N9: (0.176,-48.020,22.236)
O5': (2.477,-52.315,22.676)
O3': (-0.451,-50.933,25.707)
Image (generated by PyMOL):