Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0687:0731
Extra
PDB:
ATOM 1 O3' A A 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 2 P C A 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 3 OP1 C A 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 4 OP2 C A 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 5 O5' C A 687 43.446 61.070 42.864 1.00 54.02 O
ATOM 6 C5' C A 687 42.063 61.411 42.657 1.00 54.39 C
ATOM 7 C4' C A 687 41.202 60.717 43.686 1.00 55.41 C
ATOM 8 O4' C A 687 41.750 60.922 45.005 1.00 55.02 O
ATOM 9 C3' C A 687 39.783 61.245 43.854 1.00 54.77 C
ATOM 10 O3' C A 687 38.900 60.608 42.937 1.00 53.28 O
ATOM 11 C2' C A 687 39.394 60.729 45.247 1.00 56.73 C
ATOM 12 O2' C A 687 38.739 59.471 45.184 1.00 60.39 O
ATOM 13 C1' C A 687 40.761 60.537 45.924 1.00 55.57 C
ATOM 14 N1 C A 687 40.996 61.177 47.226 1.00 54.50 N
ATOM 15 C2 C A 687 41.225 60.351 48.333 1.00 54.07 C
ATOM 16 O2 C A 687 41.229 59.121 48.176 1.00 53.78 O
ATOM 17 N3 C A 687 41.434 60.911 49.543 1.00 53.74 N
ATOM 18 C4 C A 687 41.422 62.237 49.674 1.00 53.63 C
ATOM 19 N4 C A 687 41.640 62.743 50.891 1.00 53.00 N
ATOM 20 C5 C A 687 41.189 63.104 48.564 1.00 52.05 C
ATOM 21 C6 C A 687 40.987 62.536 47.370 1.00 53.75 C
ATOM 22 P A A 688 38.720 61.164 41.446 1.00 51.55 P
ATOM 23 OP1 A A 688 39.047 60.014 40.572 1.00 51.65 O
ATOM 24 OP2 A A 688 39.421 62.451 41.247 1.00 55.22 O
ATOM 25 O5' A A 688 37.161 61.449 41.356 1.00 50.02 O
TER
ATOM 1 O3' G B 730 42.567 67.894 47.555 1.00 45.54 O
ATOM 2 P G B 731 41.144 67.628 48.250 1.00 45.43 P
ATOM 3 OP1 G B 731 40.250 68.758 47.900 1.00 45.99 O
ATOM 4 OP2 G B 731 41.339 67.268 49.673 1.00 44.16 O
ATOM 5 O5' G B 731 40.603 66.331 47.501 1.00 50.38 O
ATOM 6 C5' G B 731 40.339 66.330 46.080 1.00 48.38 C
ATOM 7 C4' G B 731 38.994 65.695 45.802 1.00 48.39 C
ATOM 8 O4' G B 731 38.968 64.347 46.343 1.00 49.07 O
ATOM 9 C3' G B 731 37.808 66.382 46.455 1.00 47.91 C
ATOM 10 O3' G B 731 37.370 67.461 45.644 1.00 45.05 O
ATOM 11 C2' G B 731 36.778 65.262 46.547 1.00 49.40 C
ATOM 12 O2' G B 731 36.082 65.040 45.335 1.00 50.66 O
ATOM 13 C1' G B 731 37.672 64.053 46.839 1.00 50.53 C
ATOM 14 N9 G B 731 37.794 63.699 48.251 1.00 52.02 N
ATOM 15 C8 G B 731 37.803 64.551 49.330 1.00 52.66 C
ATOM 16 N7 G B 731 37.955 63.933 50.469 1.00 52.83 N
ATOM 17 C5 G B 731 38.047 62.593 50.124 1.00 52.37 C
ATOM 18 C6 G B 731 38.230 61.447 50.938 1.00 51.80 C
ATOM 19 O6 G B 731 38.349 61.388 52.164 1.00 50.92 O
ATOM 20 N1 G B 731 38.271 60.283 50.179 1.00 51.85 N
ATOM 21 C2 G B 731 38.148 60.225 48.812 1.00 52.67 C
ATOM 22 N2 G B 731 38.207 59.004 48.265 1.00 52.10 N
ATOM 23 N3 G B 731 37.978 61.287 48.040 1.00 52.31 N
ATOM 24 C4 G B 731 37.939 62.430 48.759 1.00 52.65 C
ATOM 25 P G B 732 36.173 68.402 46.143 1.00 45.63 P
ATOM 26 OP1 G B 732 36.386 68.690 47.590 1.00 46.14 O
ATOM 27 OP2 G B 732 34.899 67.794 45.702 1.00 47.35 O
ATOM 28 O5' G B 732 36.393 69.741 45.311 1.00 47.53 O
TER
ATOM 2 P C A 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 3 OP1 C A 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 4 OP2 C A 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 5 O5' C A 687 43.446 61.070 42.864 1.00 54.02 O
ATOM 6 C5' C A 687 42.063 61.411 42.657 1.00 54.39 C
ATOM 7 C4' C A 687 41.202 60.717 43.686 1.00 55.41 C
ATOM 8 O4' C A 687 41.750 60.922 45.005 1.00 55.02 O
ATOM 9 C3' C A 687 39.783 61.245 43.854 1.00 54.77 C
ATOM 10 O3' C A 687 38.900 60.608 42.937 1.00 53.28 O
ATOM 11 C2' C A 687 39.394 60.729 45.247 1.00 56.73 C
ATOM 12 O2' C A 687 38.739 59.471 45.184 1.00 60.39 O
ATOM 13 C1' C A 687 40.761 60.537 45.924 1.00 55.57 C
ATOM 14 N1 C A 687 40.996 61.177 47.226 1.00 54.50 N
ATOM 15 C2 C A 687 41.225 60.351 48.333 1.00 54.07 C
ATOM 16 O2 C A 687 41.229 59.121 48.176 1.00 53.78 O
ATOM 17 N3 C A 687 41.434 60.911 49.543 1.00 53.74 N
ATOM 18 C4 C A 687 41.422 62.237 49.674 1.00 53.63 C
ATOM 19 N4 C A 687 41.640 62.743 50.891 1.00 53.00 N
ATOM 20 C5 C A 687 41.189 63.104 48.564 1.00 52.05 C
ATOM 21 C6 C A 687 40.987 62.536 47.370 1.00 53.75 C
ATOM 22 P A A 688 38.720 61.164 41.446 1.00 51.55 P
ATOM 23 OP1 A A 688 39.047 60.014 40.572 1.00 51.65 O
ATOM 24 OP2 A A 688 39.421 62.451 41.247 1.00 55.22 O
ATOM 25 O5' A A 688 37.161 61.449 41.356 1.00 50.02 O
TER
ATOM 1 O3' G B 730 42.567 67.894 47.555 1.00 45.54 O
ATOM 2 P G B 731 41.144 67.628 48.250 1.00 45.43 P
ATOM 3 OP1 G B 731 40.250 68.758 47.900 1.00 45.99 O
ATOM 4 OP2 G B 731 41.339 67.268 49.673 1.00 44.16 O
ATOM 5 O5' G B 731 40.603 66.331 47.501 1.00 50.38 O
ATOM 6 C5' G B 731 40.339 66.330 46.080 1.00 48.38 C
ATOM 7 C4' G B 731 38.994 65.695 45.802 1.00 48.39 C
ATOM 8 O4' G B 731 38.968 64.347 46.343 1.00 49.07 O
ATOM 9 C3' G B 731 37.808 66.382 46.455 1.00 47.91 C
ATOM 10 O3' G B 731 37.370 67.461 45.644 1.00 45.05 O
ATOM 11 C2' G B 731 36.778 65.262 46.547 1.00 49.40 C
ATOM 12 O2' G B 731 36.082 65.040 45.335 1.00 50.66 O
ATOM 13 C1' G B 731 37.672 64.053 46.839 1.00 50.53 C
ATOM 14 N9 G B 731 37.794 63.699 48.251 1.00 52.02 N
ATOM 15 C8 G B 731 37.803 64.551 49.330 1.00 52.66 C
ATOM 16 N7 G B 731 37.955 63.933 50.469 1.00 52.83 N
ATOM 17 C5 G B 731 38.047 62.593 50.124 1.00 52.37 C
ATOM 18 C6 G B 731 38.230 61.447 50.938 1.00 51.80 C
ATOM 19 O6 G B 731 38.349 61.388 52.164 1.00 50.92 O
ATOM 20 N1 G B 731 38.271 60.283 50.179 1.00 51.85 N
ATOM 21 C2 G B 731 38.148 60.225 48.812 1.00 52.67 C
ATOM 22 N2 G B 731 38.207 59.004 48.265 1.00 52.10 N
ATOM 23 N3 G B 731 37.978 61.287 48.040 1.00 52.31 N
ATOM 24 C4 G B 731 37.939 62.430 48.759 1.00 52.65 C
ATOM 25 P G B 732 36.173 68.402 46.143 1.00 45.63 P
ATOM 26 OP1 G B 732 36.386 68.690 47.590 1.00 46.14 O
ATOM 27 OP2 G B 732 34.899 67.794 45.702 1.00 47.35 O
ATOM 28 O5' G B 732 36.393 69.741 45.311 1.00 47.53 O
TER
Atoms:
C2: (41.225,60.351,48.333)
OP1: (44.101,58.812,42.045)
OP2: (43.903,60.802,40.432)
C4: (41.422,62.237,49.674)
O5': (43.446,61.070,42.864)
C3': (39.783,61.245,43.854)
C1': (40.761,60.537,45.924)
O4': (41.750,60.922,45.005)
C5': (42.063,61.411,42.657)
P: (44.268,60.261,41.769)
O2: (41.229,59.121,48.176)
C4': (41.202,60.717,43.686)
C2': (39.394,60.729,45.247)
O2': (38.739,59.471,45.184)
N1: (40.996,61.177,47.226)
N3: (41.434,60.911,49.543)
N4: (41.640,62.743,50.891)
C6: (40.987,62.536,47.370)
C5: (41.189,63.104,48.564)
O3': (38.900,60.608,42.937)
OP1: (44.101,58.812,42.045)
OP2: (43.903,60.802,40.432)
C4: (41.422,62.237,49.674)
O5': (43.446,61.070,42.864)
C3': (39.783,61.245,43.854)
C1': (40.761,60.537,45.924)
O4': (41.750,60.922,45.005)
C5': (42.063,61.411,42.657)
P: (44.268,60.261,41.769)
O2: (41.229,59.121,48.176)
C4': (41.202,60.717,43.686)
C2': (39.394,60.729,45.247)
O2': (38.739,59.471,45.184)
N1: (40.996,61.177,47.226)
N3: (41.434,60.911,49.543)
N4: (41.640,62.743,50.891)
C6: (40.987,62.536,47.370)
C5: (41.189,63.104,48.564)
O3': (38.900,60.608,42.937)
OP1: (40.250,68.758,47.900)
OP2: (41.339,67.268,49.673)
C3': (37.808,66.382,46.455)
C1': (37.672,64.053,46.839)
C5': (40.339,66.330,46.080)
O6: (38.349,61.388,52.164)
O4': (38.968,64.347,46.343)
C8: (37.803,64.551,49.330)
C2: (38.148,60.225,48.812)
C6: (38.230,61.447,50.938)
C5: (38.047,62.593,50.124)
C4: (37.939,62.430,48.759)
P: (41.144,67.628,48.250)
C4': (38.994,65.695,45.802)
C2': (36.778,65.262,46.547)
O2': (36.082,65.040,45.335)
N1: (38.271,60.283,50.179)
N2: (38.207,59.004,48.265)
N3: (37.978,61.287,48.040)
N7: (37.955,63.933,50.469)
N9: (37.794,63.699,48.251)
O5': (40.603,66.331,47.501)
O3': (37.370,67.461,45.644)
OP2: (41.339,67.268,49.673)
C3': (37.808,66.382,46.455)
C1': (37.672,64.053,46.839)
C5': (40.339,66.330,46.080)
O6: (38.349,61.388,52.164)
O4': (38.968,64.347,46.343)
C8: (37.803,64.551,49.330)
C2: (38.148,60.225,48.812)
C6: (38.230,61.447,50.938)
C5: (38.047,62.593,50.124)
C4: (37.939,62.430,48.759)
P: (41.144,67.628,48.250)
C4': (38.994,65.695,45.802)
C2': (36.778,65.262,46.547)
O2': (36.082,65.040,45.335)
N1: (38.271,60.283,50.179)
N2: (38.207,59.004,48.265)
N3: (37.978,61.287,48.040)
N7: (37.955,63.933,50.469)
N9: (37.794,63.699,48.251)
O5': (40.603,66.331,47.501)
O3': (37.370,67.461,45.644)
Image (generated by PyMOL):