Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2561:A2048
Extra
PDB:
ATOM 1 O3' G A2560 -22.701 110.642 173.207 1.00 20.01 O
ATOM 2 P A A2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 3 OP1 A A2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 4 OP2 A A2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 5 O5' A A2561 -21.796 111.456 175.436 1.00 34.27 O
ATOM 6 C5' A A2561 -20.524 111.939 174.971 1.00 42.35 C
ATOM 7 C4' A A2561 -19.597 112.473 176.060 1.00 41.43 C
ATOM 8 O4' A A2561 -20.152 113.627 176.720 1.00 35.11 O
ATOM 9 C3' A A2561 -19.288 111.524 177.199 1.00 42.02 C
ATOM 10 O3' A A2561 -18.207 110.724 176.793 1.00 40.18 O
ATOM 11 C2' A A2561 -18.810 112.472 178.277 1.00 32.89 C
ATOM 12 O2' A A2561 -17.490 112.873 178.013 1.00 37.60 O
ATOM 13 C1' A A2561 -19.757 113.636 178.080 1.00 34.63 C
ATOM 14 N9 A A2561 -20.937 113.519 178.922 1.00 33.36 N
ATOM 15 C8 A A2561 -22.103 112.879 178.615 1.00 45.01 C
ATOM 16 N7 A A2561 -23.004 112.927 179.569 1.00 48.47 N
ATOM 17 C5 A A2561 -22.385 113.653 180.568 1.00 47.71 C
ATOM 18 C6 A A2561 -22.817 114.057 181.845 1.00 53.13 C
ATOM 19 N6 A A2561 -24.027 113.760 182.330 1.00 59.09 N
ATOM 20 N1 A A2561 -21.957 114.779 182.596 1.00 49.51 N
ATOM 21 C2 A A2561 -20.750 115.068 182.088 1.00 49.28 C
ATOM 22 N3 A A2561 -20.232 114.735 180.904 1.00 44.48 N
ATOM 23 C4 A A2561 -21.110 114.024 180.186 1.00 39.92 C
ATOM 24 P G A2562 -18.100 109.206 177.266 1.00 32.89 P
ATOM 25 OP1 G A2562 -17.762 109.200 178.719 1.00 42.87 O
ATOM 26 OP2 G A2562 -17.208 108.530 176.291 1.00 37.50 O
ATOM 27 O5' G A2562 -19.606 108.707 177.032 1.00 38.94 O
TER
ATOM 1 O3' G B2047 -30.511 113.584 183.098 1.00 45.14 O
ATOM 2 P A B2048 -29.961 114.976 182.513 1.00 35.79 P
ATOM 3 OP1 A B2048 -31.093 115.719 181.926 1.00 36.09 O
ATOM 4 OP2 A B2048 -28.800 114.659 181.646 1.00 45.66 O
ATOM 5 O5' A B2048 -29.444 115.709 183.837 1.00 23.49 O
ATOM 6 C5' A B2048 -30.311 115.648 184.932 1.00 31.67 C
ATOM 7 C4' A B2048 -29.640 116.080 186.217 1.00 30.01 C
ATOM 8 O4' A B2048 -28.585 115.174 186.616 1.00 32.00 O
ATOM 9 C3' A B2048 -28.931 117.412 186.137 1.00 30.54 C
ATOM 10 O3' A B2048 -29.915 118.446 186.124 1.00 34.05 O
ATOM 11 C2' A B2048 -28.141 117.334 187.437 1.00 28.93 C
ATOM 12 O2' A B2048 -28.996 117.492 188.549 1.00 21.79 O
ATOM 13 C1' A B2048 -27.615 115.894 187.366 1.00 36.09 C
ATOM 14 N9 A B2048 -26.318 115.694 186.707 1.00 40.18 N
ATOM 15 C8 A B2048 -26.129 115.262 185.427 1.00 44.36 C
ATOM 16 N7 A B2048 -24.876 115.159 185.067 1.00 40.15 N
ATOM 17 C5 A B2048 -24.187 115.549 186.191 1.00 40.72 C
ATOM 18 C6 A B2048 -22.810 115.653 186.445 1.00 45.05 C
ATOM 19 N6 A B2048 -21.884 115.356 185.529 1.00 39.18 N
ATOM 20 N1 A B2048 -22.429 116.073 187.671 1.00 46.07 N
ATOM 21 C2 A B2048 -23.381 116.368 188.570 1.00 39.12 C
ATOM 22 N3 A B2048 -24.710 116.300 188.441 1.00 42.39 N
ATOM 23 C4 A B2048 -25.053 115.877 187.215 1.00 41.09 C
ATOM 24 P C B2049 -29.455 119.907 185.713 1.00 32.81 P
ATOM 25 OP1 C B2049 -28.016 120.006 186.037 1.00 38.40 O
ATOM 26 OP2 C B2049 -30.436 120.834 186.299 1.00 42.36 O
ATOM 27 O5' C B2049 -29.609 119.959 184.114 1.00 41.62 O
TER
ATOM 2 P A A2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 3 OP1 A A2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 4 OP2 A A2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 5 O5' A A2561 -21.796 111.456 175.436 1.00 34.27 O
ATOM 6 C5' A A2561 -20.524 111.939 174.971 1.00 42.35 C
ATOM 7 C4' A A2561 -19.597 112.473 176.060 1.00 41.43 C
ATOM 8 O4' A A2561 -20.152 113.627 176.720 1.00 35.11 O
ATOM 9 C3' A A2561 -19.288 111.524 177.199 1.00 42.02 C
ATOM 10 O3' A A2561 -18.207 110.724 176.793 1.00 40.18 O
ATOM 11 C2' A A2561 -18.810 112.472 178.277 1.00 32.89 C
ATOM 12 O2' A A2561 -17.490 112.873 178.013 1.00 37.60 O
ATOM 13 C1' A A2561 -19.757 113.636 178.080 1.00 34.63 C
ATOM 14 N9 A A2561 -20.937 113.519 178.922 1.00 33.36 N
ATOM 15 C8 A A2561 -22.103 112.879 178.615 1.00 45.01 C
ATOM 16 N7 A A2561 -23.004 112.927 179.569 1.00 48.47 N
ATOM 17 C5 A A2561 -22.385 113.653 180.568 1.00 47.71 C
ATOM 18 C6 A A2561 -22.817 114.057 181.845 1.00 53.13 C
ATOM 19 N6 A A2561 -24.027 113.760 182.330 1.00 59.09 N
ATOM 20 N1 A A2561 -21.957 114.779 182.596 1.00 49.51 N
ATOM 21 C2 A A2561 -20.750 115.068 182.088 1.00 49.28 C
ATOM 22 N3 A A2561 -20.232 114.735 180.904 1.00 44.48 N
ATOM 23 C4 A A2561 -21.110 114.024 180.186 1.00 39.92 C
ATOM 24 P G A2562 -18.100 109.206 177.266 1.00 32.89 P
ATOM 25 OP1 G A2562 -17.762 109.200 178.719 1.00 42.87 O
ATOM 26 OP2 G A2562 -17.208 108.530 176.291 1.00 37.50 O
ATOM 27 O5' G A2562 -19.606 108.707 177.032 1.00 38.94 O
TER
ATOM 1 O3' G B2047 -30.511 113.584 183.098 1.00 45.14 O
ATOM 2 P A B2048 -29.961 114.976 182.513 1.00 35.79 P
ATOM 3 OP1 A B2048 -31.093 115.719 181.926 1.00 36.09 O
ATOM 4 OP2 A B2048 -28.800 114.659 181.646 1.00 45.66 O
ATOM 5 O5' A B2048 -29.444 115.709 183.837 1.00 23.49 O
ATOM 6 C5' A B2048 -30.311 115.648 184.932 1.00 31.67 C
ATOM 7 C4' A B2048 -29.640 116.080 186.217 1.00 30.01 C
ATOM 8 O4' A B2048 -28.585 115.174 186.616 1.00 32.00 O
ATOM 9 C3' A B2048 -28.931 117.412 186.137 1.00 30.54 C
ATOM 10 O3' A B2048 -29.915 118.446 186.124 1.00 34.05 O
ATOM 11 C2' A B2048 -28.141 117.334 187.437 1.00 28.93 C
ATOM 12 O2' A B2048 -28.996 117.492 188.549 1.00 21.79 O
ATOM 13 C1' A B2048 -27.615 115.894 187.366 1.00 36.09 C
ATOM 14 N9 A B2048 -26.318 115.694 186.707 1.00 40.18 N
ATOM 15 C8 A B2048 -26.129 115.262 185.427 1.00 44.36 C
ATOM 16 N7 A B2048 -24.876 115.159 185.067 1.00 40.15 N
ATOM 17 C5 A B2048 -24.187 115.549 186.191 1.00 40.72 C
ATOM 18 C6 A B2048 -22.810 115.653 186.445 1.00 45.05 C
ATOM 19 N6 A B2048 -21.884 115.356 185.529 1.00 39.18 N
ATOM 20 N1 A B2048 -22.429 116.073 187.671 1.00 46.07 N
ATOM 21 C2 A B2048 -23.381 116.368 188.570 1.00 39.12 C
ATOM 22 N3 A B2048 -24.710 116.300 188.441 1.00 42.39 N
ATOM 23 C4 A B2048 -25.053 115.877 187.215 1.00 41.09 C
ATOM 24 P C B2049 -29.455 119.907 185.713 1.00 32.81 P
ATOM 25 OP1 C B2049 -28.016 120.006 186.037 1.00 38.40 O
ATOM 26 OP2 C B2049 -30.436 120.834 186.299 1.00 42.36 O
ATOM 27 O5' C B2049 -29.609 119.959 184.114 1.00 41.62 O
TER
Atoms:
OP1: (-24.286,111.098,175.161)
OP2: (-23.005,112.966,173.918)
C3': (-19.288,111.524,177.199)
C1': (-19.757,113.636,178.080)
C5': (-20.524,111.939,174.971)
O4': (-20.152,113.627,176.720)
C8: (-22.103,112.879,178.615)
O2': (-17.490,112.873,178.013)
C6: (-22.817,114.057,181.845)
C5: (-22.385,113.653,180.568)
C4: (-21.110,114.024,180.186)
P: (-23.067,111.592,174.461)
C4': (-19.597,112.473,176.060)
C2': (-18.810,112.472,178.277)
C2: (-20.750,115.068,182.088)
N1: (-21.957,114.779,182.596)
N3: (-20.232,114.735,180.904)
N6: (-24.027,113.760,182.330)
N7: (-23.004,112.927,179.569)
N9: (-20.937,113.519,178.922)
O5': (-21.796,111.456,175.436)
O3': (-18.207,110.724,176.793)
OP2: (-23.005,112.966,173.918)
C3': (-19.288,111.524,177.199)
C1': (-19.757,113.636,178.080)
C5': (-20.524,111.939,174.971)
O4': (-20.152,113.627,176.720)
C8: (-22.103,112.879,178.615)
O2': (-17.490,112.873,178.013)
C6: (-22.817,114.057,181.845)
C5: (-22.385,113.653,180.568)
C4: (-21.110,114.024,180.186)
P: (-23.067,111.592,174.461)
C4': (-19.597,112.473,176.060)
C2': (-18.810,112.472,178.277)
C2: (-20.750,115.068,182.088)
N1: (-21.957,114.779,182.596)
N3: (-20.232,114.735,180.904)
N6: (-24.027,113.760,182.330)
N7: (-23.004,112.927,179.569)
N9: (-20.937,113.519,178.922)
O5': (-21.796,111.456,175.436)
O3': (-18.207,110.724,176.793)
OP1: (-31.093,115.719,181.926)
OP2: (-28.800,114.659,181.646)
C3': (-28.931,117.412,186.137)
C1': (-27.615,115.894,187.366)
C5': (-30.311,115.648,184.932)
O4': (-28.585,115.174,186.616)
C8: (-26.129,115.262,185.427)
O2': (-28.996,117.492,188.549)
C6: (-22.810,115.653,186.445)
C5: (-24.187,115.549,186.191)
C4: (-25.053,115.877,187.215)
P: (-29.961,114.976,182.513)
C4': (-29.640,116.080,186.217)
C2': (-28.141,117.334,187.437)
C2: (-23.381,116.368,188.570)
N1: (-22.429,116.073,187.671)
N3: (-24.710,116.300,188.441)
N6: (-21.884,115.356,185.529)
N7: (-24.876,115.159,185.067)
N9: (-26.318,115.694,186.707)
O5': (-29.444,115.709,183.837)
O3': (-29.915,118.446,186.124)
OP2: (-28.800,114.659,181.646)
C3': (-28.931,117.412,186.137)
C1': (-27.615,115.894,187.366)
C5': (-30.311,115.648,184.932)
O4': (-28.585,115.174,186.616)
C8: (-26.129,115.262,185.427)
O2': (-28.996,117.492,188.549)
C6: (-22.810,115.653,186.445)
C5: (-24.187,115.549,186.191)
C4: (-25.053,115.877,187.215)
P: (-29.961,114.976,182.513)
C4': (-29.640,116.080,186.217)
C2': (-28.141,117.334,187.437)
C2: (-23.381,116.368,188.570)
N1: (-22.429,116.073,187.671)
N3: (-24.710,116.300,188.441)
N6: (-21.884,115.356,185.529)
N7: (-24.876,115.159,185.067)
N9: (-26.318,115.694,186.707)
O5': (-29.444,115.709,183.837)
O3': (-29.915,118.446,186.124)
Image (generated by PyMOL):