Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0687:0731
Extra
PDB:
ATOM 1 O3' A A 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 2 P C A 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 3 OP1 C A 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 4 OP2 C A 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 5 O5' C A 687 43.924 60.817 43.187 1.00 68.76 O
ATOM 6 C5' C A 687 42.590 61.316 42.992 1.00 67.79 C
ATOM 7 C4' C A 687 41.659 60.707 44.006 1.00 67.03 C
ATOM 8 O4' C A 687 42.108 61.012 45.339 1.00 66.42 O
ATOM 9 C3' C A 687 40.240 61.259 44.020 1.00 66.97 C
ATOM 10 O3' C A 687 39.447 60.535 43.081 1.00 65.56 O
ATOM 11 C2' C A 687 39.748 60.932 45.440 1.00 68.58 C
ATOM 12 O2' C A 687 38.961 59.756 45.486 1.00 72.92 O
ATOM 13 C1' C A 687 41.057 60.661 46.196 1.00 67.52 C
ATOM 14 N1 C A 687 41.232 61.293 47.512 1.00 66.05 N
ATOM 15 C2 C A 687 41.306 60.466 48.637 1.00 65.86 C
ATOM 16 O2 C A 687 41.238 59.235 48.487 1.00 66.12 O
ATOM 17 N3 C A 687 41.445 61.022 49.857 1.00 65.13 N
ATOM 18 C4 C A 687 41.514 62.344 49.982 1.00 64.17 C
ATOM 19 N4 C A 687 41.647 62.845 51.209 1.00 64.10 N
ATOM 20 C5 C A 687 41.449 63.211 48.855 1.00 64.97 C
ATOM 21 C6 C A 687 41.312 62.648 47.649 1.00 65.90 C
ATOM 22 P A A 688 38.951 61.224 41.719 1.00 64.67 P
ATOM 23 OP1 A A 688 39.240 60.235 40.649 1.00 64.87 O
ATOM 24 OP2 A A 688 39.470 62.601 41.595 1.00 66.62 O
ATOM 25 O5' A A 688 37.373 61.311 41.886 1.00 63.59 O
TER
ATOM 1 O3' G B 730 42.922 68.003 47.822 1.00 53.11 O
ATOM 2 P G B 731 41.499 67.733 48.515 1.00 53.33 P
ATOM 3 OP1 G B 731 40.594 68.880 48.229 1.00 50.68 O
ATOM 4 OP2 G B 731 41.732 67.310 49.920 1.00 52.18 O
ATOM 5 O5' G B 731 40.937 66.464 47.731 1.00 58.51 O
ATOM 6 C5' G B 731 40.641 66.516 46.318 1.00 59.17 C
ATOM 7 C4' G B 731 39.302 65.867 46.040 1.00 59.63 C
ATOM 8 O4' G B 731 39.303 64.511 46.562 1.00 60.36 O
ATOM 9 C3' G B 731 38.104 66.510 46.716 1.00 59.85 C
ATOM 10 O3' G B 731 37.633 67.611 45.967 1.00 60.30 O
ATOM 11 C2' G B 731 37.091 65.376 46.739 1.00 61.24 C
ATOM 12 O2' G B 731 36.426 65.209 45.505 1.00 61.20 O
ATOM 13 C1' G B 731 37.997 64.172 47.004 1.00 62.37 C
ATOM 14 N9 G B 731 38.066 63.789 48.412 1.00 62.94 N
ATOM 15 C8 G B 731 38.080 64.623 49.504 1.00 63.22 C
ATOM 16 N7 G B 731 38.142 63.983 50.638 1.00 63.73 N
ATOM 17 C5 G B 731 38.173 62.646 50.273 1.00 63.72 C
ATOM 18 C6 G B 731 38.244 61.482 51.076 1.00 64.34 C
ATOM 19 O6 G B 731 38.303 61.399 52.311 1.00 64.43 O
ATOM 20 N1 G B 731 38.247 60.326 50.299 1.00 64.74 N
ATOM 21 C2 G B 731 38.189 60.297 48.925 1.00 64.52 C
ATOM 22 N2 G B 731 38.188 59.081 48.359 1.00 64.40 N
ATOM 23 N3 G B 731 38.132 61.379 48.165 1.00 63.29 N
ATOM 24 C4 G B 731 38.125 62.510 48.902 1.00 63.28 C
ATOM 25 P G B 732 36.417 68.497 46.530 1.00 62.96 P
ATOM 26 OP1 G B 732 36.594 68.639 48.003 1.00 63.42 O
ATOM 27 OP2 G B 732 35.141 67.950 45.999 1.00 62.31 O
ATOM 28 O5' G B 732 36.661 69.914 45.845 1.00 63.81 O
TER
ATOM 2 P C A 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 3 OP1 C A 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 4 OP2 C A 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 5 O5' C A 687 43.924 60.817 43.187 1.00 68.76 O
ATOM 6 C5' C A 687 42.590 61.316 42.992 1.00 67.79 C
ATOM 7 C4' C A 687 41.659 60.707 44.006 1.00 67.03 C
ATOM 8 O4' C A 687 42.108 61.012 45.339 1.00 66.42 O
ATOM 9 C3' C A 687 40.240 61.259 44.020 1.00 66.97 C
ATOM 10 O3' C A 687 39.447 60.535 43.081 1.00 65.56 O
ATOM 11 C2' C A 687 39.748 60.932 45.440 1.00 68.58 C
ATOM 12 O2' C A 687 38.961 59.756 45.486 1.00 72.92 O
ATOM 13 C1' C A 687 41.057 60.661 46.196 1.00 67.52 C
ATOM 14 N1 C A 687 41.232 61.293 47.512 1.00 66.05 N
ATOM 15 C2 C A 687 41.306 60.466 48.637 1.00 65.86 C
ATOM 16 O2 C A 687 41.238 59.235 48.487 1.00 66.12 O
ATOM 17 N3 C A 687 41.445 61.022 49.857 1.00 65.13 N
ATOM 18 C4 C A 687 41.514 62.344 49.982 1.00 64.17 C
ATOM 19 N4 C A 687 41.647 62.845 51.209 1.00 64.10 N
ATOM 20 C5 C A 687 41.449 63.211 48.855 1.00 64.97 C
ATOM 21 C6 C A 687 41.312 62.648 47.649 1.00 65.90 C
ATOM 22 P A A 688 38.951 61.224 41.719 1.00 64.67 P
ATOM 23 OP1 A A 688 39.240 60.235 40.649 1.00 64.87 O
ATOM 24 OP2 A A 688 39.470 62.601 41.595 1.00 66.62 O
ATOM 25 O5' A A 688 37.373 61.311 41.886 1.00 63.59 O
TER
ATOM 1 O3' G B 730 42.922 68.003 47.822 1.00 53.11 O
ATOM 2 P G B 731 41.499 67.733 48.515 1.00 53.33 P
ATOM 3 OP1 G B 731 40.594 68.880 48.229 1.00 50.68 O
ATOM 4 OP2 G B 731 41.732 67.310 49.920 1.00 52.18 O
ATOM 5 O5' G B 731 40.937 66.464 47.731 1.00 58.51 O
ATOM 6 C5' G B 731 40.641 66.516 46.318 1.00 59.17 C
ATOM 7 C4' G B 731 39.302 65.867 46.040 1.00 59.63 C
ATOM 8 O4' G B 731 39.303 64.511 46.562 1.00 60.36 O
ATOM 9 C3' G B 731 38.104 66.510 46.716 1.00 59.85 C
ATOM 10 O3' G B 731 37.633 67.611 45.967 1.00 60.30 O
ATOM 11 C2' G B 731 37.091 65.376 46.739 1.00 61.24 C
ATOM 12 O2' G B 731 36.426 65.209 45.505 1.00 61.20 O
ATOM 13 C1' G B 731 37.997 64.172 47.004 1.00 62.37 C
ATOM 14 N9 G B 731 38.066 63.789 48.412 1.00 62.94 N
ATOM 15 C8 G B 731 38.080 64.623 49.504 1.00 63.22 C
ATOM 16 N7 G B 731 38.142 63.983 50.638 1.00 63.73 N
ATOM 17 C5 G B 731 38.173 62.646 50.273 1.00 63.72 C
ATOM 18 C6 G B 731 38.244 61.482 51.076 1.00 64.34 C
ATOM 19 O6 G B 731 38.303 61.399 52.311 1.00 64.43 O
ATOM 20 N1 G B 731 38.247 60.326 50.299 1.00 64.74 N
ATOM 21 C2 G B 731 38.189 60.297 48.925 1.00 64.52 C
ATOM 22 N2 G B 731 38.188 59.081 48.359 1.00 64.40 N
ATOM 23 N3 G B 731 38.132 61.379 48.165 1.00 63.29 N
ATOM 24 C4 G B 731 38.125 62.510 48.902 1.00 63.28 C
ATOM 25 P G B 732 36.417 68.497 46.530 1.00 62.96 P
ATOM 26 OP1 G B 732 36.594 68.639 48.003 1.00 63.42 O
ATOM 27 OP2 G B 732 35.141 67.950 45.999 1.00 62.31 O
ATOM 28 O5' G B 732 36.661 69.914 45.845 1.00 63.81 O
TER
Atoms:
C2: (41.306,60.466,48.637)
OP1: (44.684,58.732,42.060)
OP2: (44.320,60.892,40.723)
C4: (41.514,62.344,49.982)
O5': (43.924,60.817,43.187)
C3': (40.240,61.259,44.020)
C1': (41.057,60.661,46.196)
O4': (42.108,61.012,45.339)
C5': (42.590,61.316,42.992)
P: (44.756,60.215,41.970)
O2: (41.238,59.235,48.487)
C4': (41.659,60.707,44.006)
C2': (39.748,60.932,45.440)
O2': (38.961,59.756,45.486)
N1: (41.232,61.293,47.512)
N3: (41.445,61.022,49.857)
N4: (41.647,62.845,51.209)
C6: (41.312,62.648,47.649)
C5: (41.449,63.211,48.855)
O3': (39.447,60.535,43.081)
OP1: (44.684,58.732,42.060)
OP2: (44.320,60.892,40.723)
C4: (41.514,62.344,49.982)
O5': (43.924,60.817,43.187)
C3': (40.240,61.259,44.020)
C1': (41.057,60.661,46.196)
O4': (42.108,61.012,45.339)
C5': (42.590,61.316,42.992)
P: (44.756,60.215,41.970)
O2: (41.238,59.235,48.487)
C4': (41.659,60.707,44.006)
C2': (39.748,60.932,45.440)
O2': (38.961,59.756,45.486)
N1: (41.232,61.293,47.512)
N3: (41.445,61.022,49.857)
N4: (41.647,62.845,51.209)
C6: (41.312,62.648,47.649)
C5: (41.449,63.211,48.855)
O3': (39.447,60.535,43.081)
OP1: (40.594,68.880,48.229)
OP2: (41.732,67.310,49.920)
C3': (38.104,66.510,46.716)
C1': (37.997,64.172,47.004)
C5': (40.641,66.516,46.318)
O6: (38.303,61.399,52.311)
O4': (39.303,64.511,46.562)
C8: (38.080,64.623,49.504)
C2: (38.189,60.297,48.925)
C6: (38.244,61.482,51.076)
C5: (38.173,62.646,50.273)
C4: (38.125,62.510,48.902)
P: (41.499,67.733,48.515)
C4': (39.302,65.867,46.040)
C2': (37.091,65.376,46.739)
O2': (36.426,65.209,45.505)
N1: (38.247,60.326,50.299)
N2: (38.188,59.081,48.359)
N3: (38.132,61.379,48.165)
N7: (38.142,63.983,50.638)
N9: (38.066,63.789,48.412)
O5': (40.937,66.464,47.731)
O3': (37.633,67.611,45.967)
OP2: (41.732,67.310,49.920)
C3': (38.104,66.510,46.716)
C1': (37.997,64.172,47.004)
C5': (40.641,66.516,46.318)
O6: (38.303,61.399,52.311)
O4': (39.303,64.511,46.562)
C8: (38.080,64.623,49.504)
C2: (38.189,60.297,48.925)
C6: (38.244,61.482,51.076)
C5: (38.173,62.646,50.273)
C4: (38.125,62.510,48.902)
P: (41.499,67.733,48.515)
C4': (39.302,65.867,46.040)
C2': (37.091,65.376,46.739)
O2': (36.426,65.209,45.505)
N1: (38.247,60.326,50.299)
N2: (38.188,59.081,48.359)
N3: (38.132,61.379,48.165)
N7: (38.142,63.983,50.638)
N9: (38.066,63.789,48.412)
O5': (40.937,66.464,47.731)
O3': (37.633,67.611,45.967)
Image (generated by PyMOL):