Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0687:0731
Extra
PDB:
ATOM 1 O3' A A 686 45.853 60.524 41.994 1.00 57.26 O
ATOM 2 P C A 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 3 OP1 C A 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 4 OP2 C A 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 5 O5' C A 687 43.505 60.724 42.884 1.00 58.52 O
ATOM 6 C5' C A 687 42.154 61.172 42.704 1.00 59.12 C
ATOM 7 C4' C A 687 41.263 60.545 43.742 1.00 59.75 C
ATOM 8 O4' C A 687 41.804 60.791 45.058 1.00 58.89 O
ATOM 9 C3' C A 687 39.862 61.135 43.857 1.00 59.81 C
ATOM 10 O3' C A 687 38.968 60.510 42.926 1.00 59.60 O
ATOM 11 C2' C A 687 39.438 60.731 45.279 1.00 60.56 C
ATOM 12 O2' C A 687 38.714 59.516 45.317 1.00 63.38 O
ATOM 13 C1' C A 687 40.786 60.498 45.980 1.00 59.84 C
ATOM 14 N1 C A 687 41.034 61.184 47.257 1.00 58.56 N
ATOM 15 C2 C A 687 41.319 60.406 48.381 1.00 58.19 C
ATOM 16 O2 C A 687 41.385 59.175 48.260 1.00 59.26 O
ATOM 17 N3 C A 687 41.518 61.008 49.571 1.00 57.29 N
ATOM 18 C4 C A 687 41.451 62.333 49.663 1.00 57.74 C
ATOM 19 N4 C A 687 41.659 62.883 50.859 1.00 58.58 N
ATOM 20 C5 C A 687 41.173 63.154 48.534 1.00 57.94 C
ATOM 21 C6 C A 687 40.976 62.544 47.360 1.00 58.76 C
ATOM 22 P A A 688 38.776 61.101 41.442 1.00 58.85 P
ATOM 23 OP1 A A 688 39.079 59.995 40.505 1.00 58.48 O
ATOM 24 OP2 A A 688 39.490 62.388 41.304 1.00 61.14 O
ATOM 25 O5' A A 688 37.216 61.389 41.353 1.00 56.42 O
TER
ATOM 1 O3' G B 730 42.585 67.860 47.535 1.00 51.88 O
ATOM 2 P G B 731 41.161 67.686 48.252 1.00 52.98 P
ATOM 3 OP1 G B 731 40.311 68.850 47.879 1.00 51.06 O
ATOM 4 OP2 G B 731 41.370 67.368 49.685 1.00 53.13 O
ATOM 5 O5' G B 731 40.563 66.389 47.552 1.00 55.62 O
ATOM 6 C5' G B 731 40.404 66.321 46.122 1.00 56.07 C
ATOM 7 C4' G B 731 39.085 65.669 45.776 1.00 56.44 C
ATOM 8 O4' G B 731 39.059 64.312 46.287 1.00 56.94 O
ATOM 9 C3' G B 731 37.852 66.314 46.385 1.00 55.83 C
ATOM 10 O3' G B 731 37.421 67.406 45.598 1.00 55.00 O
ATOM 11 C2' G B 731 36.845 65.175 46.359 1.00 57.31 C
ATOM 12 O2' G B 731 36.294 64.992 45.071 1.00 58.91 O
ATOM 13 C1' G B 731 37.740 63.979 46.695 1.00 57.85 C
ATOM 14 N9 G B 731 37.779 63.636 48.113 1.00 57.68 N
ATOM 15 C8 G B 731 37.686 64.496 49.179 1.00 58.06 C
ATOM 16 N7 G B 731 37.790 63.895 50.331 1.00 59.21 N
ATOM 17 C5 G B 731 37.954 62.558 50.007 1.00 58.88 C
ATOM 18 C6 G B 731 38.126 61.429 50.842 1.00 59.53 C
ATOM 19 O6 G B 731 38.175 61.385 52.076 1.00 60.36 O
ATOM 20 N1 G B 731 38.248 60.259 50.101 1.00 59.78 N
ATOM 21 C2 G B 731 38.209 60.185 48.734 1.00 59.25 C
ATOM 22 N2 G B 731 38.332 58.961 48.210 1.00 59.31 N
ATOM 23 N3 G B 731 38.057 61.232 47.942 1.00 58.67 N
ATOM 24 C4 G B 731 37.937 62.379 48.642 1.00 58.52 C
ATOM 25 P G B 732 36.200 68.311 46.099 1.00 55.75 P
ATOM 26 OP1 G B 732 36.437 68.571 47.543 1.00 55.58 O
ATOM 27 OP2 G B 732 34.933 67.665 45.674 1.00 56.25 O
ATOM 28 O5' G B 732 36.373 69.659 45.265 1.00 55.32 O
TER
ATOM 2 P C A 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 3 OP1 C A 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 4 OP2 C A 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 5 O5' C A 687 43.505 60.724 42.884 1.00 58.52 O
ATOM 6 C5' C A 687 42.154 61.172 42.704 1.00 59.12 C
ATOM 7 C4' C A 687 41.263 60.545 43.742 1.00 59.75 C
ATOM 8 O4' C A 687 41.804 60.791 45.058 1.00 58.89 O
ATOM 9 C3' C A 687 39.862 61.135 43.857 1.00 59.81 C
ATOM 10 O3' C A 687 38.968 60.510 42.926 1.00 59.60 O
ATOM 11 C2' C A 687 39.438 60.731 45.279 1.00 60.56 C
ATOM 12 O2' C A 687 38.714 59.516 45.317 1.00 63.38 O
ATOM 13 C1' C A 687 40.786 60.498 45.980 1.00 59.84 C
ATOM 14 N1 C A 687 41.034 61.184 47.257 1.00 58.56 N
ATOM 15 C2 C A 687 41.319 60.406 48.381 1.00 58.19 C
ATOM 16 O2 C A 687 41.385 59.175 48.260 1.00 59.26 O
ATOM 17 N3 C A 687 41.518 61.008 49.571 1.00 57.29 N
ATOM 18 C4 C A 687 41.451 62.333 49.663 1.00 57.74 C
ATOM 19 N4 C A 687 41.659 62.883 50.859 1.00 58.58 N
ATOM 20 C5 C A 687 41.173 63.154 48.534 1.00 57.94 C
ATOM 21 C6 C A 687 40.976 62.544 47.360 1.00 58.76 C
ATOM 22 P A A 688 38.776 61.101 41.442 1.00 58.85 P
ATOM 23 OP1 A A 688 39.079 59.995 40.505 1.00 58.48 O
ATOM 24 OP2 A A 688 39.490 62.388 41.304 1.00 61.14 O
ATOM 25 O5' A A 688 37.216 61.389 41.353 1.00 56.42 O
TER
ATOM 1 O3' G B 730 42.585 67.860 47.535 1.00 51.88 O
ATOM 2 P G B 731 41.161 67.686 48.252 1.00 52.98 P
ATOM 3 OP1 G B 731 40.311 68.850 47.879 1.00 51.06 O
ATOM 4 OP2 G B 731 41.370 67.368 49.685 1.00 53.13 O
ATOM 5 O5' G B 731 40.563 66.389 47.552 1.00 55.62 O
ATOM 6 C5' G B 731 40.404 66.321 46.122 1.00 56.07 C
ATOM 7 C4' G B 731 39.085 65.669 45.776 1.00 56.44 C
ATOM 8 O4' G B 731 39.059 64.312 46.287 1.00 56.94 O
ATOM 9 C3' G B 731 37.852 66.314 46.385 1.00 55.83 C
ATOM 10 O3' G B 731 37.421 67.406 45.598 1.00 55.00 O
ATOM 11 C2' G B 731 36.845 65.175 46.359 1.00 57.31 C
ATOM 12 O2' G B 731 36.294 64.992 45.071 1.00 58.91 O
ATOM 13 C1' G B 731 37.740 63.979 46.695 1.00 57.85 C
ATOM 14 N9 G B 731 37.779 63.636 48.113 1.00 57.68 N
ATOM 15 C8 G B 731 37.686 64.496 49.179 1.00 58.06 C
ATOM 16 N7 G B 731 37.790 63.895 50.331 1.00 59.21 N
ATOM 17 C5 G B 731 37.954 62.558 50.007 1.00 58.88 C
ATOM 18 C6 G B 731 38.126 61.429 50.842 1.00 59.53 C
ATOM 19 O6 G B 731 38.175 61.385 52.076 1.00 60.36 O
ATOM 20 N1 G B 731 38.248 60.259 50.101 1.00 59.78 N
ATOM 21 C2 G B 731 38.209 60.185 48.734 1.00 59.25 C
ATOM 22 N2 G B 731 38.332 58.961 48.210 1.00 59.31 N
ATOM 23 N3 G B 731 38.057 61.232 47.942 1.00 58.67 N
ATOM 24 C4 G B 731 37.937 62.379 48.642 1.00 58.52 C
ATOM 25 P G B 732 36.200 68.311 46.099 1.00 55.75 P
ATOM 26 OP1 G B 732 36.437 68.571 47.543 1.00 55.58 O
ATOM 27 OP2 G B 732 34.933 67.665 45.674 1.00 56.25 O
ATOM 28 O5' G B 732 36.373 69.659 45.265 1.00 55.32 O
TER
Atoms:
C2: (41.319,60.406,48.381)
OP1: (44.245,58.650,41.736)
OP2: (43.923,60.831,40.423)
C4: (41.451,62.333,49.663)
O5': (43.505,60.724,42.884)
C3': (39.862,61.135,43.857)
C1': (40.786,60.498,45.980)
O4': (41.804,60.791,45.058)
C5': (42.154,61.172,42.704)
P: (44.334,60.127,41.667)
O2: (41.385,59.175,48.260)
C4': (41.263,60.545,43.742)
C2': (39.438,60.731,45.279)
O2': (38.714,59.516,45.317)
N1: (41.034,61.184,47.257)
N3: (41.518,61.008,49.571)
N4: (41.659,62.883,50.859)
C6: (40.976,62.544,47.360)
C5: (41.173,63.154,48.534)
O3': (38.968,60.510,42.926)
OP1: (44.245,58.650,41.736)
OP2: (43.923,60.831,40.423)
C4: (41.451,62.333,49.663)
O5': (43.505,60.724,42.884)
C3': (39.862,61.135,43.857)
C1': (40.786,60.498,45.980)
O4': (41.804,60.791,45.058)
C5': (42.154,61.172,42.704)
P: (44.334,60.127,41.667)
O2: (41.385,59.175,48.260)
C4': (41.263,60.545,43.742)
C2': (39.438,60.731,45.279)
O2': (38.714,59.516,45.317)
N1: (41.034,61.184,47.257)
N3: (41.518,61.008,49.571)
N4: (41.659,62.883,50.859)
C6: (40.976,62.544,47.360)
C5: (41.173,63.154,48.534)
O3': (38.968,60.510,42.926)
OP1: (40.311,68.850,47.879)
OP2: (41.370,67.368,49.685)
C3': (37.852,66.314,46.385)
C1': (37.740,63.979,46.695)
C5': (40.404,66.321,46.122)
O6: (38.175,61.385,52.076)
O4': (39.059,64.312,46.287)
C8: (37.686,64.496,49.179)
C2: (38.209,60.185,48.734)
C6: (38.126,61.429,50.842)
C5: (37.954,62.558,50.007)
C4: (37.937,62.379,48.642)
P: (41.161,67.686,48.252)
C4': (39.085,65.669,45.776)
C2': (36.845,65.175,46.359)
O2': (36.294,64.992,45.071)
N1: (38.248,60.259,50.101)
N2: (38.332,58.961,48.210)
N3: (38.057,61.232,47.942)
N7: (37.790,63.895,50.331)
N9: (37.779,63.636,48.113)
O5': (40.563,66.389,47.552)
O3': (37.421,67.406,45.598)
OP2: (41.370,67.368,49.685)
C3': (37.852,66.314,46.385)
C1': (37.740,63.979,46.695)
C5': (40.404,66.321,46.122)
O6: (38.175,61.385,52.076)
O4': (39.059,64.312,46.287)
C8: (37.686,64.496,49.179)
C2: (38.209,60.185,48.734)
C6: (38.126,61.429,50.842)
C5: (37.954,62.558,50.007)
C4: (37.937,62.379,48.642)
P: (41.161,67.686,48.252)
C4': (39.085,65.669,45.776)
C2': (36.845,65.175,46.359)
O2': (36.294,64.992,45.071)
N1: (38.248,60.259,50.101)
N2: (38.332,58.961,48.210)
N3: (38.057,61.232,47.942)
N7: (37.790,63.895,50.331)
N9: (37.779,63.636,48.113)
O5': (40.563,66.389,47.552)
O3': (37.421,67.406,45.598)
Image (generated by PyMOL):