Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HVY:E16:E15
Extra
PDB:
ATOM 1 O3' G A 15 -42.644 -22.723 33.835 1.00 43.10 O
ATOM 2 P C A 16 -41.393 -23.567 34.381 1.00 43.76 P
ATOM 3 OP1 C A 16 -41.016 -24.535 33.326 1.00 43.53 O
ATOM 4 OP2 C A 16 -41.726 -24.063 35.736 1.00 43.83 O
ATOM 5 O5' C A 16 -40.224 -22.477 34.539 1.00 43.70 O
ATOM 6 C5' C A 16 -39.436 -22.074 33.415 1.00 43.45 C
ATOM 7 C4' C A 16 -38.611 -20.836 33.722 1.00 43.33 C
ATOM 8 O4' C A 16 -39.483 -19.730 34.081 1.00 43.49 O
ATOM 9 C3' C A 16 -37.677 -20.953 34.919 1.00 43.29 C
ATOM 10 O3' C A 16 -36.476 -21.647 34.588 1.00 43.06 O
ATOM 11 C2' C A 16 -37.458 -19.482 35.258 1.00 43.18 C
ATOM 12 O2' C A 16 -36.556 -18.837 34.379 1.00 43.20 O
ATOM 13 C1' C A 16 -38.867 -18.925 35.078 1.00 43.02 C
ATOM 14 N1 C A 16 -39.700 -18.887 36.353 1.00 42.87 N
ATOM 15 C2 C A 16 -39.574 -17.810 37.256 1.00 42.75 C
ATOM 16 O2 C A 16 -38.783 -16.887 37.027 1.00 42.72 O
ATOM 17 N3 C A 16 -40.333 -17.803 38.386 1.00 42.77 N
ATOM 18 C4 C A 16 -41.188 -18.800 38.638 1.00 42.78 C
ATOM 19 N4 C A 16 -41.906 -18.737 39.763 1.00 42.65 N
ATOM 20 C5 C A 16 -41.337 -19.902 37.741 1.00 42.63 C
ATOM 21 C6 C A 16 -40.584 -19.901 36.632 1.00 42.65 C
ATOM 22 P C A 17 -35.738 -22.539 35.696 1.00 43.50 P
ATOM 23 OP1 C A 17 -34.635 -23.275 35.040 1.00 43.69 O
ATOM 24 OP2 C A 17 -36.764 -23.299 36.448 1.00 44.15 O
ATOM 25 O5' C A 17 -35.109 -21.452 36.689 1.00 43.13 O
TER
ATOM 1 O3' U B 14 -47.116 -21.190 38.755 1.00 43.49 O
ATOM 2 P G B 15 -45.818 -21.970 38.219 1.00 43.31 P
ATOM 3 OP1 G B 15 -46.140 -23.415 38.199 1.00 43.36 O
ATOM 4 OP2 G B 15 -44.662 -21.495 39.013 1.00 43.25 O
ATOM 5 O5' G B 15 -45.633 -21.432 36.719 1.00 43.21 O
ATOM 6 C5' G B 15 -45.422 -22.321 35.618 1.00 42.98 C
ATOM 7 C4' G B 15 -44.716 -21.631 34.460 1.00 42.66 C
ATOM 8 O4' G B 15 -45.137 -20.243 34.379 1.00 42.33 O
ATOM 9 C3' G B 15 -43.195 -21.615 34.556 1.00 42.71 C
ATOM 10 O3' G B 15 -42.644 -22.723 33.835 1.00 43.10 O
ATOM 11 C2' G B 15 -42.812 -20.281 33.915 1.00 42.35 C
ATOM 12 O2' G B 15 -42.554 -20.388 32.529 1.00 42.40 O
ATOM 13 C1' G B 15 -44.030 -19.388 34.157 1.00 41.88 C
ATOM 14 N9 G B 15 -43.887 -18.466 35.291 1.00 41.71 N
ATOM 15 C8 G B 15 -44.627 -18.470 36.450 1.00 41.68 C
ATOM 16 N7 G B 15 -44.295 -17.537 37.297 1.00 41.64 N
ATOM 17 C5 G B 15 -43.264 -16.858 36.663 1.00 41.63 C
ATOM 18 C6 G B 15 -42.505 -15.743 37.102 1.00 41.64 C
ATOM 19 O6 G B 15 -42.605 -15.123 38.170 1.00 41.59 O
ATOM 20 N1 G B 15 -41.551 -15.354 36.161 1.00 41.67 N
ATOM 21 C2 G B 15 -41.356 -15.971 34.945 1.00 41.68 C
ATOM 22 N2 G B 15 -40.390 -15.460 34.166 1.00 41.65 N
ATOM 23 N3 G B 15 -42.061 -17.017 34.523 1.00 41.63 N
ATOM 24 C4 G B 15 -42.999 -17.413 35.426 1.00 41.67 C
ATOM 25 P C B 16 -41.393 -23.567 34.381 1.00 43.76 P
ATOM 26 OP1 C B 16 -41.016 -24.535 33.326 1.00 43.53 O
ATOM 27 OP2 C B 16 -41.726 -24.063 35.736 1.00 43.83 O
ATOM 28 O5' C B 16 -40.224 -22.477 34.539 1.00 43.70 O
TER
ATOM 2 P C A 16 -41.393 -23.567 34.381 1.00 43.76 P
ATOM 3 OP1 C A 16 -41.016 -24.535 33.326 1.00 43.53 O
ATOM 4 OP2 C A 16 -41.726 -24.063 35.736 1.00 43.83 O
ATOM 5 O5' C A 16 -40.224 -22.477 34.539 1.00 43.70 O
ATOM 6 C5' C A 16 -39.436 -22.074 33.415 1.00 43.45 C
ATOM 7 C4' C A 16 -38.611 -20.836 33.722 1.00 43.33 C
ATOM 8 O4' C A 16 -39.483 -19.730 34.081 1.00 43.49 O
ATOM 9 C3' C A 16 -37.677 -20.953 34.919 1.00 43.29 C
ATOM 10 O3' C A 16 -36.476 -21.647 34.588 1.00 43.06 O
ATOM 11 C2' C A 16 -37.458 -19.482 35.258 1.00 43.18 C
ATOM 12 O2' C A 16 -36.556 -18.837 34.379 1.00 43.20 O
ATOM 13 C1' C A 16 -38.867 -18.925 35.078 1.00 43.02 C
ATOM 14 N1 C A 16 -39.700 -18.887 36.353 1.00 42.87 N
ATOM 15 C2 C A 16 -39.574 -17.810 37.256 1.00 42.75 C
ATOM 16 O2 C A 16 -38.783 -16.887 37.027 1.00 42.72 O
ATOM 17 N3 C A 16 -40.333 -17.803 38.386 1.00 42.77 N
ATOM 18 C4 C A 16 -41.188 -18.800 38.638 1.00 42.78 C
ATOM 19 N4 C A 16 -41.906 -18.737 39.763 1.00 42.65 N
ATOM 20 C5 C A 16 -41.337 -19.902 37.741 1.00 42.63 C
ATOM 21 C6 C A 16 -40.584 -19.901 36.632 1.00 42.65 C
ATOM 22 P C A 17 -35.738 -22.539 35.696 1.00 43.50 P
ATOM 23 OP1 C A 17 -34.635 -23.275 35.040 1.00 43.69 O
ATOM 24 OP2 C A 17 -36.764 -23.299 36.448 1.00 44.15 O
ATOM 25 O5' C A 17 -35.109 -21.452 36.689 1.00 43.13 O
TER
ATOM 1 O3' U B 14 -47.116 -21.190 38.755 1.00 43.49 O
ATOM 2 P G B 15 -45.818 -21.970 38.219 1.00 43.31 P
ATOM 3 OP1 G B 15 -46.140 -23.415 38.199 1.00 43.36 O
ATOM 4 OP2 G B 15 -44.662 -21.495 39.013 1.00 43.25 O
ATOM 5 O5' G B 15 -45.633 -21.432 36.719 1.00 43.21 O
ATOM 6 C5' G B 15 -45.422 -22.321 35.618 1.00 42.98 C
ATOM 7 C4' G B 15 -44.716 -21.631 34.460 1.00 42.66 C
ATOM 8 O4' G B 15 -45.137 -20.243 34.379 1.00 42.33 O
ATOM 9 C3' G B 15 -43.195 -21.615 34.556 1.00 42.71 C
ATOM 10 O3' G B 15 -42.644 -22.723 33.835 1.00 43.10 O
ATOM 11 C2' G B 15 -42.812 -20.281 33.915 1.00 42.35 C
ATOM 12 O2' G B 15 -42.554 -20.388 32.529 1.00 42.40 O
ATOM 13 C1' G B 15 -44.030 -19.388 34.157 1.00 41.88 C
ATOM 14 N9 G B 15 -43.887 -18.466 35.291 1.00 41.71 N
ATOM 15 C8 G B 15 -44.627 -18.470 36.450 1.00 41.68 C
ATOM 16 N7 G B 15 -44.295 -17.537 37.297 1.00 41.64 N
ATOM 17 C5 G B 15 -43.264 -16.858 36.663 1.00 41.63 C
ATOM 18 C6 G B 15 -42.505 -15.743 37.102 1.00 41.64 C
ATOM 19 O6 G B 15 -42.605 -15.123 38.170 1.00 41.59 O
ATOM 20 N1 G B 15 -41.551 -15.354 36.161 1.00 41.67 N
ATOM 21 C2 G B 15 -41.356 -15.971 34.945 1.00 41.68 C
ATOM 22 N2 G B 15 -40.390 -15.460 34.166 1.00 41.65 N
ATOM 23 N3 G B 15 -42.061 -17.017 34.523 1.00 41.63 N
ATOM 24 C4 G B 15 -42.999 -17.413 35.426 1.00 41.67 C
ATOM 25 P C B 16 -41.393 -23.567 34.381 1.00 43.76 P
ATOM 26 OP1 C B 16 -41.016 -24.535 33.326 1.00 43.53 O
ATOM 27 OP2 C B 16 -41.726 -24.063 35.736 1.00 43.83 O
ATOM 28 O5' C B 16 -40.224 -22.477 34.539 1.00 43.70 O
TER
Atoms:
C2: (-39.574,-17.810,37.256)
OP1: (-41.016,-24.535,33.326)
OP2: (-41.726,-24.063,35.736)
C4: (-41.188,-18.800,38.638)
O5': (-40.224,-22.477,34.539)
C3': (-37.677,-20.953,34.919)
C1': (-38.867,-18.925,35.078)
O4': (-39.483,-19.730,34.081)
C5': (-39.436,-22.074,33.415)
P: (-41.393,-23.567,34.381)
O2: (-38.783,-16.887,37.027)
C4': (-38.611,-20.836,33.722)
C2': (-37.458,-19.482,35.258)
O2': (-36.556,-18.837,34.379)
N1: (-39.700,-18.887,36.353)
N3: (-40.333,-17.803,38.386)
N4: (-41.906,-18.737,39.763)
C6: (-40.584,-19.901,36.632)
C5: (-41.337,-19.902,37.741)
O3': (-36.476,-21.647,34.588)
OP1: (-41.016,-24.535,33.326)
OP2: (-41.726,-24.063,35.736)
C4: (-41.188,-18.800,38.638)
O5': (-40.224,-22.477,34.539)
C3': (-37.677,-20.953,34.919)
C1': (-38.867,-18.925,35.078)
O4': (-39.483,-19.730,34.081)
C5': (-39.436,-22.074,33.415)
P: (-41.393,-23.567,34.381)
O2: (-38.783,-16.887,37.027)
C4': (-38.611,-20.836,33.722)
C2': (-37.458,-19.482,35.258)
O2': (-36.556,-18.837,34.379)
N1: (-39.700,-18.887,36.353)
N3: (-40.333,-17.803,38.386)
N4: (-41.906,-18.737,39.763)
C6: (-40.584,-19.901,36.632)
C5: (-41.337,-19.902,37.741)
O3': (-36.476,-21.647,34.588)
OP1: (-46.140,-23.415,38.199)
OP2: (-44.662,-21.495,39.013)
C3': (-43.195,-21.615,34.556)
C1': (-44.030,-19.388,34.157)
C5': (-45.422,-22.321,35.618)
O6: (-42.605,-15.123,38.170)
O4': (-45.137,-20.243,34.379)
C8: (-44.627,-18.470,36.450)
C2: (-41.356,-15.971,34.945)
C6: (-42.505,-15.743,37.102)
C5: (-43.264,-16.858,36.663)
C4: (-42.999,-17.413,35.426)
P: (-45.818,-21.970,38.219)
C4': (-44.716,-21.631,34.460)
C2': (-42.812,-20.281,33.915)
O2': (-42.554,-20.388,32.529)
N1: (-41.551,-15.354,36.161)
N2: (-40.390,-15.460,34.166)
N3: (-42.061,-17.017,34.523)
N7: (-44.295,-17.537,37.297)
N9: (-43.887,-18.466,35.291)
O5': (-45.633,-21.432,36.719)
O3': (-42.644,-22.723,33.835)
OP2: (-44.662,-21.495,39.013)
C3': (-43.195,-21.615,34.556)
C1': (-44.030,-19.388,34.157)
C5': (-45.422,-22.321,35.618)
O6: (-42.605,-15.123,38.170)
O4': (-45.137,-20.243,34.379)
C8: (-44.627,-18.470,36.450)
C2: (-41.356,-15.971,34.945)
C6: (-42.505,-15.743,37.102)
C5: (-43.264,-16.858,36.663)
C4: (-42.999,-17.413,35.426)
P: (-45.818,-21.970,38.219)
C4': (-44.716,-21.631,34.460)
C2': (-42.812,-20.281,33.915)
O2': (-42.554,-20.388,32.529)
N1: (-41.551,-15.354,36.161)
N2: (-40.390,-15.460,34.166)
N3: (-42.061,-17.017,34.523)
N7: (-44.295,-17.537,37.297)
N9: (-43.887,-18.466,35.291)
O5': (-45.633,-21.432,36.719)
O3': (-42.644,-22.723,33.835)
Image (generated by PyMOL):