Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A509:A503
Extra
PDB:
ATOM 1 O3' A A 508 -106.320 33.356 -55.832 1.00 27.69 O
ATOM 2 P C A 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 3 OP1 C A 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 4 OP2 C A 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 5 O5' C A 509 -108.467 34.400 -55.084 1.00 27.67 O
ATOM 6 C5' C A 509 -108.714 33.962 -53.752 1.00 27.67 C
ATOM 7 C4' C A 509 -110.001 33.188 -53.667 1.00 27.67 C
ATOM 8 O4' C A 509 -109.865 31.944 -54.404 1.00 27.67 O
ATOM 9 C3' C A 509 -110.445 32.792 -52.263 1.00 27.67 C
ATOM 10 O3' C A 509 -111.858 32.831 -52.193 1.00 27.67 O
ATOM 11 C2' C A 509 -110.010 31.348 -52.163 1.00 27.67 C
ATOM 12 O2' C A 509 -110.731 30.599 -51.209 1.00 27.67 O
ATOM 13 C1' C A 509 -110.285 30.877 -53.579 1.00 27.67 C
ATOM 14 N1 C A 509 -109.556 29.659 -53.976 1.00 27.71 N
ATOM 15 C2 C A 509 -110.068 28.958 -55.069 1.00 27.71 C
ATOM 16 O2 C A 509 -111.087 29.401 -55.610 1.00 27.71 O
ATOM 17 N3 C A 509 -109.460 27.835 -55.509 1.00 27.71 N
ATOM 18 C4 C A 509 -108.369 27.422 -54.873 1.00 27.71 C
ATOM 19 N4 C A 509 -107.785 26.321 -55.329 1.00 27.71 N
ATOM 20 C5 C A 509 -107.812 28.106 -53.744 1.00 27.71 C
ATOM 21 C6 C A 509 -108.432 29.217 -53.330 1.00 27.71 C
ATOM 22 P U A 510 -112.580 33.821 -51.179 1.00 38.09 P
ATOM 23 OP1 U A 510 -112.675 35.145 -51.868 1.00 38.09 O
ATOM 24 OP2 U A 510 -111.851 33.737 -49.882 1.00 38.09 O
ATOM 25 O5' U A 510 -114.024 33.170 -51.036 1.00 38.09 O
TER
ATOM 1 O3' C B 502 -103.479 28.368 -51.122 1.00 20.83 O
ATOM 2 P G B 503 -104.479 27.513 -50.215 1.00 30.06 P
ATOM 3 OP1 G B 503 -103.991 26.099 -50.241 1.00 30.06 O
ATOM 4 OP2 G B 503 -105.861 27.809 -50.692 1.00 30.06 O
ATOM 5 O5' G B 503 -104.256 28.148 -48.763 1.00 30.06 O
ATOM 6 C5' G B 503 -104.992 29.288 -48.352 1.00 30.06 C
ATOM 7 C4' G B 503 -104.502 29.854 -47.036 1.00 30.06 C
ATOM 8 O4' G B 503 -104.305 28.805 -46.061 1.00 30.06 O
ATOM 9 C3' G B 503 -103.170 30.578 -47.055 1.00 30.06 C
ATOM 10 O3' G B 503 -103.267 31.884 -47.595 1.00 30.06 O
ATOM 11 C2' G B 503 -102.767 30.561 -45.578 1.00 30.06 C
ATOM 12 O2' G B 503 -103.419 31.605 -44.859 1.00 30.06 O
ATOM 13 C1' G B 503 -103.340 29.220 -45.113 1.00 30.06 C
ATOM 14 N9 G B 503 -102.315 28.176 -45.001 1.00 30.02 N
ATOM 15 C8 G B 503 -102.320 27.043 -45.764 1.00 30.02 C
ATOM 16 N7 G B 503 -101.338 26.226 -45.483 1.00 30.02 N
ATOM 17 C5 G B 503 -100.644 26.850 -44.455 1.00 30.02 C
ATOM 18 C6 G B 503 -99.485 26.401 -43.763 1.00 30.02 C
ATOM 19 O6 G B 503 -98.859 25.350 -43.940 1.00 30.02 O
ATOM 20 N1 G B 503 -99.088 27.320 -42.801 1.00 30.02 N
ATOM 21 C2 G B 503 -99.742 28.507 -42.551 1.00 30.02 C
ATOM 22 N2 G B 503 -99.197 29.246 -41.574 1.00 30.02 N
ATOM 23 N3 G B 503 -100.836 28.942 -43.184 1.00 30.02 N
ATOM 24 C4 G B 503 -101.240 28.066 -44.133 1.00 30.02 C
ATOM 25 P G B 504 -101.977 32.588 -48.242 1.00 25.18 P
ATOM 26 OP1 G B 504 -102.404 33.947 -48.681 1.00 25.18 O
ATOM 27 OP2 G B 504 -101.437 31.653 -49.258 1.00 25.18 O
ATOM 28 O5' G B 504 -100.967 32.697 -46.997 1.00 25.18 O
TER
ATOM 2 P C A 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 3 OP1 C A 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 4 OP2 C A 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 5 O5' C A 509 -108.467 34.400 -55.084 1.00 27.67 O
ATOM 6 C5' C A 509 -108.714 33.962 -53.752 1.00 27.67 C
ATOM 7 C4' C A 509 -110.001 33.188 -53.667 1.00 27.67 C
ATOM 8 O4' C A 509 -109.865 31.944 -54.404 1.00 27.67 O
ATOM 9 C3' C A 509 -110.445 32.792 -52.263 1.00 27.67 C
ATOM 10 O3' C A 509 -111.858 32.831 -52.193 1.00 27.67 O
ATOM 11 C2' C A 509 -110.010 31.348 -52.163 1.00 27.67 C
ATOM 12 O2' C A 509 -110.731 30.599 -51.209 1.00 27.67 O
ATOM 13 C1' C A 509 -110.285 30.877 -53.579 1.00 27.67 C
ATOM 14 N1 C A 509 -109.556 29.659 -53.976 1.00 27.71 N
ATOM 15 C2 C A 509 -110.068 28.958 -55.069 1.00 27.71 C
ATOM 16 O2 C A 509 -111.087 29.401 -55.610 1.00 27.71 O
ATOM 17 N3 C A 509 -109.460 27.835 -55.509 1.00 27.71 N
ATOM 18 C4 C A 509 -108.369 27.422 -54.873 1.00 27.71 C
ATOM 19 N4 C A 509 -107.785 26.321 -55.329 1.00 27.71 N
ATOM 20 C5 C A 509 -107.812 28.106 -53.744 1.00 27.71 C
ATOM 21 C6 C A 509 -108.432 29.217 -53.330 1.00 27.71 C
ATOM 22 P U A 510 -112.580 33.821 -51.179 1.00 38.09 P
ATOM 23 OP1 U A 510 -112.675 35.145 -51.868 1.00 38.09 O
ATOM 24 OP2 U A 510 -111.851 33.737 -49.882 1.00 38.09 O
ATOM 25 O5' U A 510 -114.024 33.170 -51.036 1.00 38.09 O
TER
ATOM 1 O3' C B 502 -103.479 28.368 -51.122 1.00 20.83 O
ATOM 2 P G B 503 -104.479 27.513 -50.215 1.00 30.06 P
ATOM 3 OP1 G B 503 -103.991 26.099 -50.241 1.00 30.06 O
ATOM 4 OP2 G B 503 -105.861 27.809 -50.692 1.00 30.06 O
ATOM 5 O5' G B 503 -104.256 28.148 -48.763 1.00 30.06 O
ATOM 6 C5' G B 503 -104.992 29.288 -48.352 1.00 30.06 C
ATOM 7 C4' G B 503 -104.502 29.854 -47.036 1.00 30.06 C
ATOM 8 O4' G B 503 -104.305 28.805 -46.061 1.00 30.06 O
ATOM 9 C3' G B 503 -103.170 30.578 -47.055 1.00 30.06 C
ATOM 10 O3' G B 503 -103.267 31.884 -47.595 1.00 30.06 O
ATOM 11 C2' G B 503 -102.767 30.561 -45.578 1.00 30.06 C
ATOM 12 O2' G B 503 -103.419 31.605 -44.859 1.00 30.06 O
ATOM 13 C1' G B 503 -103.340 29.220 -45.113 1.00 30.06 C
ATOM 14 N9 G B 503 -102.315 28.176 -45.001 1.00 30.02 N
ATOM 15 C8 G B 503 -102.320 27.043 -45.764 1.00 30.02 C
ATOM 16 N7 G B 503 -101.338 26.226 -45.483 1.00 30.02 N
ATOM 17 C5 G B 503 -100.644 26.850 -44.455 1.00 30.02 C
ATOM 18 C6 G B 503 -99.485 26.401 -43.763 1.00 30.02 C
ATOM 19 O6 G B 503 -98.859 25.350 -43.940 1.00 30.02 O
ATOM 20 N1 G B 503 -99.088 27.320 -42.801 1.00 30.02 N
ATOM 21 C2 G B 503 -99.742 28.507 -42.551 1.00 30.02 C
ATOM 22 N2 G B 503 -99.197 29.246 -41.574 1.00 30.02 N
ATOM 23 N3 G B 503 -100.836 28.942 -43.184 1.00 30.02 N
ATOM 24 C4 G B 503 -101.240 28.066 -44.133 1.00 30.02 C
ATOM 25 P G B 504 -101.977 32.588 -48.242 1.00 25.18 P
ATOM 26 OP1 G B 504 -102.404 33.947 -48.681 1.00 25.18 O
ATOM 27 OP2 G B 504 -101.437 31.653 -49.258 1.00 25.18 O
ATOM 28 O5' G B 504 -100.967 32.697 -46.997 1.00 25.18 O
TER
Atoms:
C2: (-110.068,28.958,-55.069)
OP1: (-107.065,35.460,-56.885)
OP2: (-106.253,35.438,-54.469)
C4: (-108.369,27.422,-54.873)
O5': (-108.467,34.400,-55.084)
C3': (-110.445,32.792,-52.263)
C1': (-110.285,30.877,-53.579)
O4': (-109.865,31.944,-54.404)
C5': (-108.714,33.962,-53.752)
P: (-106.999,34.784,-55.573)
O2: (-111.087,29.401,-55.610)
C4': (-110.001,33.188,-53.667)
C2': (-110.010,31.348,-52.163)
O2': (-110.731,30.599,-51.209)
N1: (-109.556,29.659,-53.976)
N3: (-109.460,27.835,-55.509)
N4: (-107.785,26.321,-55.329)
C6: (-108.432,29.217,-53.330)
C5: (-107.812,28.106,-53.744)
O3': (-111.858,32.831,-52.193)
OP1: (-107.065,35.460,-56.885)
OP2: (-106.253,35.438,-54.469)
C4: (-108.369,27.422,-54.873)
O5': (-108.467,34.400,-55.084)
C3': (-110.445,32.792,-52.263)
C1': (-110.285,30.877,-53.579)
O4': (-109.865,31.944,-54.404)
C5': (-108.714,33.962,-53.752)
P: (-106.999,34.784,-55.573)
O2: (-111.087,29.401,-55.610)
C4': (-110.001,33.188,-53.667)
C2': (-110.010,31.348,-52.163)
O2': (-110.731,30.599,-51.209)
N1: (-109.556,29.659,-53.976)
N3: (-109.460,27.835,-55.509)
N4: (-107.785,26.321,-55.329)
C6: (-108.432,29.217,-53.330)
C5: (-107.812,28.106,-53.744)
O3': (-111.858,32.831,-52.193)
OP1: (-103.991,26.099,-50.241)
OP2: (-105.861,27.809,-50.692)
C3': (-103.170,30.578,-47.055)
C1': (-103.340,29.220,-45.113)
C5': (-104.992,29.288,-48.352)
O6: (-98.859,25.350,-43.940)
O4': (-104.305,28.805,-46.061)
C8: (-102.320,27.043,-45.764)
C2: (-99.742,28.507,-42.551)
C6: (-99.485,26.401,-43.763)
C5: (-100.644,26.850,-44.455)
C4: (-101.240,28.066,-44.133)
P: (-104.479,27.513,-50.215)
C4': (-104.502,29.854,-47.036)
C2': (-102.767,30.561,-45.578)
O2': (-103.419,31.605,-44.859)
N1: (-99.088,27.320,-42.801)
N2: (-99.197,29.246,-41.574)
N3: (-100.836,28.942,-43.184)
N7: (-101.338,26.226,-45.483)
N9: (-102.315,28.176,-45.001)
O5': (-104.256,28.148,-48.763)
O3': (-103.267,31.884,-47.595)
OP2: (-105.861,27.809,-50.692)
C3': (-103.170,30.578,-47.055)
C1': (-103.340,29.220,-45.113)
C5': (-104.992,29.288,-48.352)
O6: (-98.859,25.350,-43.940)
O4': (-104.305,28.805,-46.061)
C8: (-102.320,27.043,-45.764)
C2: (-99.742,28.507,-42.551)
C6: (-99.485,26.401,-43.763)
C5: (-100.644,26.850,-44.455)
C4: (-101.240,28.066,-44.133)
P: (-104.479,27.513,-50.215)
C4': (-104.502,29.854,-47.036)
C2': (-102.767,30.561,-45.578)
O2': (-103.419,31.605,-44.859)
N1: (-99.088,27.320,-42.801)
N2: (-99.197,29.246,-41.574)
N3: (-100.836,28.942,-43.184)
N7: (-101.338,26.226,-45.483)
N9: (-102.315,28.176,-45.001)
O5': (-104.256,28.148,-48.763)
O3': (-103.267,31.884,-47.595)
Image (generated by PyMOL):