Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A509:A503
Extra
PDB:
ATOM 1 O3' A A 508 -57.015 57.338 69.503 1.00 11.16 O
ATOM 2 P C A 509 -57.267 57.929 68.028 1.00 14.19 P
ATOM 3 OP1 C A 509 -57.136 56.795 67.077 1.00 14.19 O
ATOM 4 OP2 C A 509 -56.366 59.110 67.855 1.00 14.19 O
ATOM 5 O5' C A 509 -58.779 58.398 68.099 1.00 14.19 O
ATOM 6 C5' C A 509 -59.147 59.626 68.698 1.00 14.19 C
ATOM 7 C4' C A 509 -60.633 59.702 68.841 1.00 14.19 C
ATOM 8 O4' C A 509 -61.038 59.039 70.063 1.00 14.19 O
ATOM 9 C3' C A 509 -61.215 61.088 68.916 1.00 14.19 C
ATOM 10 O3' C A 509 -62.531 61.034 68.398 1.00 14.19 O
ATOM 11 C2' C A 509 -61.287 61.333 70.408 1.00 14.19 C
ATOM 12 O2' C A 509 -62.200 62.334 70.776 1.00 14.19 O
ATOM 13 C1' C A 509 -61.712 59.957 70.907 1.00 14.19 C
ATOM 14 N1 C A 509 -61.308 59.652 72.296 1.00 14.59 N
ATOM 15 C2 C A 509 -61.770 58.443 72.861 1.00 14.59 C
ATOM 16 O2 C A 509 -62.546 57.733 72.199 1.00 14.59 O
ATOM 17 N3 C A 509 -61.377 58.074 74.114 1.00 14.59 N
ATOM 18 C4 C A 509 -60.526 58.869 74.794 1.00 14.59 C
ATOM 19 N4 C A 509 -60.140 58.505 76.029 1.00 14.59 N
ATOM 20 C5 C A 509 -60.028 60.094 74.234 1.00 14.59 C
ATOM 21 C6 C A 509 -60.425 60.436 72.993 1.00 14.59 C
ATOM 22 P U A 510 -63.232 62.353 67.839 1.00 10.62 P
ATOM 23 OP1 U A 510 -62.855 62.470 66.406 1.00 10.62 O
ATOM 24 OP2 U A 510 -62.885 63.466 68.780 1.00 10.62 O
ATOM 25 O5' U A 510 -64.773 61.999 67.950 1.00 10.62 O
TER
ATOM 1 O3' C B 502 -55.851 62.350 75.042 1.00 9.25 O
ATOM 2 P G B 503 -56.683 63.612 75.631 1.00 15.21 P
ATOM 3 OP1 G B 503 -56.379 63.695 77.087 1.00 15.21 O
ATOM 4 OP2 G B 503 -58.107 63.459 75.201 1.00 15.21 O
ATOM 5 O5' G B 503 -56.009 64.848 74.874 1.00 15.21 O
ATOM 6 C5' G B 503 -56.475 65.302 73.613 1.00 15.21 C
ATOM 7 C4' G B 503 -55.989 66.707 73.321 1.00 15.21 C
ATOM 8 O4' G B 503 -56.264 67.580 74.458 1.00 15.21 O
ATOM 9 C3' G B 503 -54.492 66.876 73.103 1.00 15.21 C
ATOM 10 O3' G B 503 -54.070 66.502 71.809 1.00 15.21 O
ATOM 11 C2' G B 503 -54.283 68.352 73.384 1.00 15.21 C
ATOM 12 O2' G B 503 -54.658 69.127 72.249 1.00 15.21 O
ATOM 13 C1' G B 503 -55.287 68.604 74.517 1.00 15.21 C
ATOM 14 N9 G B 503 -54.641 68.590 75.847 1.00 14.94 N
ATOM 15 C8 G B 503 -54.998 67.871 76.954 1.00 14.94 C
ATOM 16 N7 G B 503 -54.227 68.061 77.989 1.00 14.94 N
ATOM 17 C5 G B 503 -53.305 68.983 77.538 1.00 14.94 C
ATOM 18 C6 G B 503 -52.216 69.582 78.219 1.00 14.94 C
ATOM 19 O6 G B 503 -51.859 69.400 79.386 1.00 14.94 O
ATOM 20 N1 G B 503 -51.523 70.475 77.414 1.00 14.94 N
ATOM 21 C2 G B 503 -51.847 70.746 76.117 1.00 14.94 C
ATOM 22 N2 G B 503 -51.052 71.616 75.511 1.00 14.94 N
ATOM 23 N3 G B 503 -52.851 70.198 75.458 1.00 14.94 N
ATOM 24 C4 G B 503 -53.543 69.326 76.226 1.00 14.94 C
ATOM 25 P G B 504 -52.913 65.407 71.637 1.00 8.53 P
ATOM 26 OP1 G B 504 -53.440 64.368 70.694 1.00 8.53 O
ATOM 27 OP2 G B 504 -52.501 65.001 72.993 1.00 8.53 O
ATOM 28 O5' G B 504 -51.727 66.205 70.950 1.00 8.53 O
TER
ATOM 2 P C A 509 -57.267 57.929 68.028 1.00 14.19 P
ATOM 3 OP1 C A 509 -57.136 56.795 67.077 1.00 14.19 O
ATOM 4 OP2 C A 509 -56.366 59.110 67.855 1.00 14.19 O
ATOM 5 O5' C A 509 -58.779 58.398 68.099 1.00 14.19 O
ATOM 6 C5' C A 509 -59.147 59.626 68.698 1.00 14.19 C
ATOM 7 C4' C A 509 -60.633 59.702 68.841 1.00 14.19 C
ATOM 8 O4' C A 509 -61.038 59.039 70.063 1.00 14.19 O
ATOM 9 C3' C A 509 -61.215 61.088 68.916 1.00 14.19 C
ATOM 10 O3' C A 509 -62.531 61.034 68.398 1.00 14.19 O
ATOM 11 C2' C A 509 -61.287 61.333 70.408 1.00 14.19 C
ATOM 12 O2' C A 509 -62.200 62.334 70.776 1.00 14.19 O
ATOM 13 C1' C A 509 -61.712 59.957 70.907 1.00 14.19 C
ATOM 14 N1 C A 509 -61.308 59.652 72.296 1.00 14.59 N
ATOM 15 C2 C A 509 -61.770 58.443 72.861 1.00 14.59 C
ATOM 16 O2 C A 509 -62.546 57.733 72.199 1.00 14.59 O
ATOM 17 N3 C A 509 -61.377 58.074 74.114 1.00 14.59 N
ATOM 18 C4 C A 509 -60.526 58.869 74.794 1.00 14.59 C
ATOM 19 N4 C A 509 -60.140 58.505 76.029 1.00 14.59 N
ATOM 20 C5 C A 509 -60.028 60.094 74.234 1.00 14.59 C
ATOM 21 C6 C A 509 -60.425 60.436 72.993 1.00 14.59 C
ATOM 22 P U A 510 -63.232 62.353 67.839 1.00 10.62 P
ATOM 23 OP1 U A 510 -62.855 62.470 66.406 1.00 10.62 O
ATOM 24 OP2 U A 510 -62.885 63.466 68.780 1.00 10.62 O
ATOM 25 O5' U A 510 -64.773 61.999 67.950 1.00 10.62 O
TER
ATOM 1 O3' C B 502 -55.851 62.350 75.042 1.00 9.25 O
ATOM 2 P G B 503 -56.683 63.612 75.631 1.00 15.21 P
ATOM 3 OP1 G B 503 -56.379 63.695 77.087 1.00 15.21 O
ATOM 4 OP2 G B 503 -58.107 63.459 75.201 1.00 15.21 O
ATOM 5 O5' G B 503 -56.009 64.848 74.874 1.00 15.21 O
ATOM 6 C5' G B 503 -56.475 65.302 73.613 1.00 15.21 C
ATOM 7 C4' G B 503 -55.989 66.707 73.321 1.00 15.21 C
ATOM 8 O4' G B 503 -56.264 67.580 74.458 1.00 15.21 O
ATOM 9 C3' G B 503 -54.492 66.876 73.103 1.00 15.21 C
ATOM 10 O3' G B 503 -54.070 66.502 71.809 1.00 15.21 O
ATOM 11 C2' G B 503 -54.283 68.352 73.384 1.00 15.21 C
ATOM 12 O2' G B 503 -54.658 69.127 72.249 1.00 15.21 O
ATOM 13 C1' G B 503 -55.287 68.604 74.517 1.00 15.21 C
ATOM 14 N9 G B 503 -54.641 68.590 75.847 1.00 14.94 N
ATOM 15 C8 G B 503 -54.998 67.871 76.954 1.00 14.94 C
ATOM 16 N7 G B 503 -54.227 68.061 77.989 1.00 14.94 N
ATOM 17 C5 G B 503 -53.305 68.983 77.538 1.00 14.94 C
ATOM 18 C6 G B 503 -52.216 69.582 78.219 1.00 14.94 C
ATOM 19 O6 G B 503 -51.859 69.400 79.386 1.00 14.94 O
ATOM 20 N1 G B 503 -51.523 70.475 77.414 1.00 14.94 N
ATOM 21 C2 G B 503 -51.847 70.746 76.117 1.00 14.94 C
ATOM 22 N2 G B 503 -51.052 71.616 75.511 1.00 14.94 N
ATOM 23 N3 G B 503 -52.851 70.198 75.458 1.00 14.94 N
ATOM 24 C4 G B 503 -53.543 69.326 76.226 1.00 14.94 C
ATOM 25 P G B 504 -52.913 65.407 71.637 1.00 8.53 P
ATOM 26 OP1 G B 504 -53.440 64.368 70.694 1.00 8.53 O
ATOM 27 OP2 G B 504 -52.501 65.001 72.993 1.00 8.53 O
ATOM 28 O5' G B 504 -51.727 66.205 70.950 1.00 8.53 O
TER
Atoms:
C2: (-61.770,58.443,72.861)
OP1: (-57.136,56.795,67.077)
OP2: (-56.366,59.110,67.855)
C4: (-60.526,58.869,74.794)
O5': (-58.779,58.398,68.099)
C3': (-61.215,61.088,68.916)
C1': (-61.712,59.957,70.907)
O4': (-61.038,59.039,70.063)
C5': (-59.147,59.626,68.698)
P: (-57.267,57.929,68.028)
O2: (-62.546,57.733,72.199)
C4': (-60.633,59.702,68.841)
C2': (-61.287,61.333,70.408)
O2': (-62.200,62.334,70.776)
N1: (-61.308,59.652,72.296)
N3: (-61.377,58.074,74.114)
N4: (-60.140,58.505,76.029)
C6: (-60.425,60.436,72.993)
C5: (-60.028,60.094,74.234)
O3': (-62.531,61.034,68.398)
OP1: (-57.136,56.795,67.077)
OP2: (-56.366,59.110,67.855)
C4: (-60.526,58.869,74.794)
O5': (-58.779,58.398,68.099)
C3': (-61.215,61.088,68.916)
C1': (-61.712,59.957,70.907)
O4': (-61.038,59.039,70.063)
C5': (-59.147,59.626,68.698)
P: (-57.267,57.929,68.028)
O2: (-62.546,57.733,72.199)
C4': (-60.633,59.702,68.841)
C2': (-61.287,61.333,70.408)
O2': (-62.200,62.334,70.776)
N1: (-61.308,59.652,72.296)
N3: (-61.377,58.074,74.114)
N4: (-60.140,58.505,76.029)
C6: (-60.425,60.436,72.993)
C5: (-60.028,60.094,74.234)
O3': (-62.531,61.034,68.398)
OP1: (-56.379,63.695,77.087)
OP2: (-58.107,63.459,75.201)
C3': (-54.492,66.876,73.103)
C1': (-55.287,68.604,74.517)
C5': (-56.475,65.302,73.613)
O6: (-51.859,69.400,79.386)
O4': (-56.264,67.580,74.458)
C8: (-54.998,67.871,76.954)
C2: (-51.847,70.746,76.117)
C6: (-52.216,69.582,78.219)
C5: (-53.305,68.983,77.538)
C4: (-53.543,69.326,76.226)
P: (-56.683,63.612,75.631)
C4': (-55.989,66.707,73.321)
C2': (-54.283,68.352,73.384)
O2': (-54.658,69.127,72.249)
N1: (-51.523,70.475,77.414)
N2: (-51.052,71.616,75.511)
N3: (-52.851,70.198,75.458)
N7: (-54.227,68.061,77.989)
N9: (-54.641,68.590,75.847)
O5': (-56.009,64.848,74.874)
O3': (-54.070,66.502,71.809)
OP2: (-58.107,63.459,75.201)
C3': (-54.492,66.876,73.103)
C1': (-55.287,68.604,74.517)
C5': (-56.475,65.302,73.613)
O6: (-51.859,69.400,79.386)
O4': (-56.264,67.580,74.458)
C8: (-54.998,67.871,76.954)
C2: (-51.847,70.746,76.117)
C6: (-52.216,69.582,78.219)
C5: (-53.305,68.983,77.538)
C4: (-53.543,69.326,76.226)
P: (-56.683,63.612,75.631)
C4': (-55.989,66.707,73.321)
C2': (-54.283,68.352,73.384)
O2': (-54.658,69.127,72.249)
N1: (-51.523,70.475,77.414)
N2: (-51.052,71.616,75.511)
N3: (-52.851,70.198,75.458)
N7: (-54.227,68.061,77.989)
N9: (-54.641,68.590,75.847)
O5': (-56.009,64.848,74.874)
O3': (-54.070,66.502,71.809)
Image (generated by PyMOL):