Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11118:11119
Extra
PDB:
ATOM 1 O3' U A1117 59.108 6.768 17.457 1.00 35.89 O
ATOM 2 P G A1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 3 OP1 G A1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 4 OP2 G A1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 5 O5' G A1118 58.092 8.801 16.329 1.00 38.39 O
ATOM 6 C5' G A1118 58.527 9.345 15.084 1.00 38.83 C
ATOM 7 C4' G A1118 58.313 10.828 15.043 1.00 38.97 C
ATOM 8 O4' G A1118 56.906 11.096 14.892 1.00 39.01 O
ATOM 9 C3' G A1118 58.744 11.574 16.294 1.00 38.69 C
ATOM 10 O3' G A1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 11 C2' G A1118 57.703 12.687 16.452 1.00 38.74 C
ATOM 12 O2' G A1118 58.106 13.873 15.783 1.00 39.08 O
ATOM 13 C1' G A1118 56.491 12.120 15.734 1.00 38.86 C
ATOM 14 N9 G A1118 55.490 11.560 16.638 1.00 38.52 N
ATOM 15 C8 G A1118 55.067 10.262 16.531 1.00 38.41 C
ATOM 16 N7 G A1118 54.095 9.966 17.334 1.00 38.13 N
ATOM 17 C5 G A1118 53.872 11.168 17.991 1.00 38.06 C
ATOM 18 C6 G A1118 52.934 11.451 18.992 1.00 37.81 C
ATOM 19 O6 G A1118 52.148 10.632 19.466 1.00 37.58 O
ATOM 20 N1 G A1118 53.008 12.781 19.435 1.00 37.83 N
ATOM 21 C2 G A1118 53.881 13.712 18.942 1.00 38.08 C
ATOM 22 N2 G A1118 53.789 14.928 19.462 1.00 38.09 N
ATOM 23 N3 G A1118 54.759 13.464 17.989 1.00 38.33 N
ATOM 24 C4 G A1118 54.709 12.175 17.576 1.00 38.30 C
ATOM 25 P C A1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 26 OP1 C A1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 27 OP2 C A1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 28 O5' C A1119 60.392 12.946 18.464 1.00 36.27 O
TER
ATOM 1 O3' G B1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 2 P C B1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 3 OP1 C B1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 4 OP2 C B1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 5 O5' C B1119 60.392 12.946 18.464 1.00 36.27 O
ATOM 6 C5' C B1119 60.553 14.352 18.431 1.00 36.45 C
ATOM 7 C4' C B1119 59.775 15.047 19.520 1.00 36.21 C
ATOM 8 O4' C B1119 58.358 14.903 19.308 1.00 36.20 O
ATOM 9 C3' C B1119 59.940 14.518 20.923 1.00 35.78 C
ATOM 10 O3' C B1119 61.173 14.828 21.495 1.00 35.72 O
ATOM 11 C2' C B1119 58.778 15.171 21.621 1.00 35.64 C
ATOM 12 O2' C B1119 59.022 16.563 21.776 1.00 35.79 O
ATOM 13 C1' C B1119 57.700 14.970 20.565 1.00 35.85 C
ATOM 14 N1 C B1119 56.973 13.708 20.778 1.00 35.62 N
ATOM 15 C2 C B1119 55.950 13.687 21.732 1.00 35.35 C
ATOM 16 O2 C B1119 55.740 14.725 22.332 1.00 35.32 O
ATOM 17 N3 C B1119 55.250 12.570 21.974 1.00 35.14 N
ATOM 18 C4 C B1119 55.582 11.501 21.262 1.00 35.21 C
ATOM 19 N4 C B1119 54.939 10.382 21.440 1.00 35.04 N
ATOM 20 C5 C B1119 56.584 11.484 20.283 1.00 35.49 C
ATOM 21 C6 C B1119 57.294 12.597 20.067 1.00 35.69 C
ATOM 22 P C B1120 61.815 13.830 22.532 1.00 34.70 P
ATOM 23 OP1 C B1120 63.098 14.418 22.917 1.00 34.74 O
ATOM 24 OP2 C B1120 61.809 12.483 21.928 1.00 34.70 O
ATOM 25 O5' C B1120 60.812 13.904 23.738 1.00 34.37 O
TER
ATOM 2 P G A1118 57.875 7.230 16.509 1.00 38.21 P
ATOM 3 OP1 G A1118 56.625 6.962 17.321 1.00 37.92 O
ATOM 4 OP2 G A1118 58.059 6.572 15.195 1.00 38.55 O
ATOM 5 O5' G A1118 58.092 8.801 16.329 1.00 38.39 O
ATOM 6 C5' G A1118 58.527 9.345 15.084 1.00 38.83 C
ATOM 7 C4' G A1118 58.313 10.828 15.043 1.00 38.97 C
ATOM 8 O4' G A1118 56.906 11.096 14.892 1.00 39.01 O
ATOM 9 C3' G A1118 58.744 11.574 16.294 1.00 38.69 C
ATOM 10 O3' G A1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 11 C2' G A1118 57.703 12.687 16.452 1.00 38.74 C
ATOM 12 O2' G A1118 58.106 13.873 15.783 1.00 39.08 O
ATOM 13 C1' G A1118 56.491 12.120 15.734 1.00 38.86 C
ATOM 14 N9 G A1118 55.490 11.560 16.638 1.00 38.52 N
ATOM 15 C8 G A1118 55.067 10.262 16.531 1.00 38.41 C
ATOM 16 N7 G A1118 54.095 9.966 17.334 1.00 38.13 N
ATOM 17 C5 G A1118 53.872 11.168 17.991 1.00 38.06 C
ATOM 18 C6 G A1118 52.934 11.451 18.992 1.00 37.81 C
ATOM 19 O6 G A1118 52.148 10.632 19.466 1.00 37.58 O
ATOM 20 N1 G A1118 53.008 12.781 19.435 1.00 37.83 N
ATOM 21 C2 G A1118 53.881 13.712 18.942 1.00 38.08 C
ATOM 22 N2 G A1118 53.789 14.928 19.462 1.00 38.09 N
ATOM 23 N3 G A1118 54.759 13.464 17.989 1.00 38.33 N
ATOM 24 C4 G A1118 54.709 12.175 17.576 1.00 38.30 C
ATOM 25 P C A1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 26 OP1 C A1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 27 OP2 C A1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 28 O5' C A1119 60.392 12.946 18.464 1.00 36.27 O
TER
ATOM 1 O3' G B1118 60.050 12.062 16.158 1.00 38.82 O
ATOM 2 P C B1119 61.095 12.049 17.362 1.00 36.50 P
ATOM 3 OP1 C B1119 62.255 12.740 16.859 1.00 36.77 O
ATOM 4 OP2 C B1119 61.249 10.653 17.818 1.00 36.24 O
ATOM 5 O5' C B1119 60.392 12.946 18.464 1.00 36.27 O
ATOM 6 C5' C B1119 60.553 14.352 18.431 1.00 36.45 C
ATOM 7 C4' C B1119 59.775 15.047 19.520 1.00 36.21 C
ATOM 8 O4' C B1119 58.358 14.903 19.308 1.00 36.20 O
ATOM 9 C3' C B1119 59.940 14.518 20.923 1.00 35.78 C
ATOM 10 O3' C B1119 61.173 14.828 21.495 1.00 35.72 O
ATOM 11 C2' C B1119 58.778 15.171 21.621 1.00 35.64 C
ATOM 12 O2' C B1119 59.022 16.563 21.776 1.00 35.79 O
ATOM 13 C1' C B1119 57.700 14.970 20.565 1.00 35.85 C
ATOM 14 N1 C B1119 56.973 13.708 20.778 1.00 35.62 N
ATOM 15 C2 C B1119 55.950 13.687 21.732 1.00 35.35 C
ATOM 16 O2 C B1119 55.740 14.725 22.332 1.00 35.32 O
ATOM 17 N3 C B1119 55.250 12.570 21.974 1.00 35.14 N
ATOM 18 C4 C B1119 55.582 11.501 21.262 1.00 35.21 C
ATOM 19 N4 C B1119 54.939 10.382 21.440 1.00 35.04 N
ATOM 20 C5 C B1119 56.584 11.484 20.283 1.00 35.49 C
ATOM 21 C6 C B1119 57.294 12.597 20.067 1.00 35.69 C
ATOM 22 P C B1120 61.815 13.830 22.532 1.00 34.70 P
ATOM 23 OP1 C B1120 63.098 14.418 22.917 1.00 34.74 O
ATOM 24 OP2 C B1120 61.809 12.483 21.928 1.00 34.70 O
ATOM 25 O5' C B1120 60.812 13.904 23.738 1.00 34.37 O
TER
Atoms:
OP1: (56.625,6.962,17.321)
OP2: (58.059,6.572,15.195)
C3': (58.744,11.574,16.294)
C1': (56.491,12.120,15.734)
C5': (58.527,9.345,15.084)
O6: (52.148,10.632,19.466)
O4': (56.906,11.096,14.892)
C8: (55.067,10.262,16.531)
C2: (53.881,13.712,18.942)
C6: (52.934,11.451,18.992)
C5: (53.872,11.168,17.991)
C4: (54.709,12.175,17.576)
P: (57.875,7.230,16.509)
C4': (58.313,10.828,15.043)
C2': (57.703,12.687,16.452)
O2': (58.106,13.873,15.783)
N1: (53.008,12.781,19.435)
N2: (53.789,14.928,19.462)
N3: (54.759,13.464,17.989)
N7: (54.095,9.966,17.334)
N9: (55.490,11.560,16.638)
O5': (58.092,8.801,16.329)
O3': (60.050,12.062,16.158)
OP2: (58.059,6.572,15.195)
C3': (58.744,11.574,16.294)
C1': (56.491,12.120,15.734)
C5': (58.527,9.345,15.084)
O6: (52.148,10.632,19.466)
O4': (56.906,11.096,14.892)
C8: (55.067,10.262,16.531)
C2: (53.881,13.712,18.942)
C6: (52.934,11.451,18.992)
C5: (53.872,11.168,17.991)
C4: (54.709,12.175,17.576)
P: (57.875,7.230,16.509)
C4': (58.313,10.828,15.043)
C2': (57.703,12.687,16.452)
O2': (58.106,13.873,15.783)
N1: (53.008,12.781,19.435)
N2: (53.789,14.928,19.462)
N3: (54.759,13.464,17.989)
N7: (54.095,9.966,17.334)
N9: (55.490,11.560,16.638)
O5': (58.092,8.801,16.329)
O3': (60.050,12.062,16.158)
C2: (55.950,13.687,21.732)
OP1: (62.255,12.740,16.859)
OP2: (61.249,10.653,17.818)
C4: (55.582,11.501,21.262)
O5': (60.392,12.946,18.464)
C3': (59.940,14.518,20.923)
C1': (57.700,14.970,20.565)
O4': (58.358,14.903,19.308)
C5': (60.553,14.352,18.431)
P: (61.095,12.049,17.362)
O2: (55.740,14.725,22.332)
C4': (59.775,15.047,19.520)
C2': (58.778,15.171,21.621)
O2': (59.022,16.563,21.776)
N1: (56.973,13.708,20.778)
N3: (55.250,12.570,21.974)
N4: (54.939,10.382,21.440)
C6: (57.294,12.597,20.067)
C5: (56.584,11.484,20.283)
O3': (61.173,14.828,21.495)
OP1: (62.255,12.740,16.859)
OP2: (61.249,10.653,17.818)
C4: (55.582,11.501,21.262)
O5': (60.392,12.946,18.464)
C3': (59.940,14.518,20.923)
C1': (57.700,14.970,20.565)
O4': (58.358,14.903,19.308)
C5': (60.553,14.352,18.431)
P: (61.095,12.049,17.362)
O2: (55.740,14.725,22.332)
C4': (59.775,15.047,19.520)
C2': (58.778,15.171,21.621)
O2': (59.022,16.563,21.776)
N1: (56.973,13.708,20.778)
N3: (55.250,12.570,21.974)
N4: (54.939,10.382,21.440)
C6: (57.294,12.597,20.067)
C5: (56.584,11.484,20.283)
O3': (61.173,14.828,21.495)
Image (generated by PyMOL):