Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:B40:B39
Extra
PDB:
ATOM 1 O3' G A 39 -110.974 166.459 111.100 1.00 65.39 O
ATOM 2 P C A 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 3 OP1 C A 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 4 OP2 C A 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 5 O5' C A 40 -112.157 165.096 109.368 1.00 44.89 O
ATOM 6 C5' C A 40 -113.475 165.160 109.877 1.00 44.89 C
ATOM 7 C4' C A 40 -114.447 164.424 108.994 1.00 44.89 C
ATOM 8 O4' C A 40 -114.293 162.998 109.193 1.00 44.89 O
ATOM 9 C3' C A 40 -115.925 164.696 109.269 1.00 44.89 C
ATOM 10 O3' C A 40 -116.401 165.856 108.605 1.00 44.89 O
ATOM 11 C2' C A 40 -116.611 163.419 108.807 1.00 44.89 C
ATOM 12 O2' C A 40 -116.887 163.480 107.418 1.00 44.89 O
ATOM 13 C1' C A 40 -115.535 162.354 109.047 1.00 44.89 C
ATOM 14 N1 C A 40 -115.792 161.535 110.245 1.00 44.60 N
ATOM 15 C2 C A 40 -116.555 160.387 110.031 1.00 44.60 C
ATOM 16 O2 C A 40 -116.969 160.195 108.868 1.00 44.60 O
ATOM 17 N3 C A 40 -116.818 159.542 111.070 1.00 44.60 N
ATOM 18 C4 C A 40 -116.338 159.818 112.296 1.00 44.60 C
ATOM 19 N4 C A 40 -116.625 158.969 113.306 1.00 44.60 N
ATOM 20 C5 C A 40 -115.541 160.996 112.530 1.00 44.60 C
ATOM 21 C6 C A 40 -115.284 161.812 111.486 1.00 44.60 C
ATOM 22 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 23 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 24 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 25 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
TER
ATOM 1 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 2 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 3 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 4 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 5 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
ATOM 6 C5' G B 39 -112.320 164.763 113.549 1.00 65.39 C
ATOM 7 C4' G B 39 -110.968 165.379 113.296 1.00 65.39 C
ATOM 8 O4' G B 39 -109.965 164.653 114.025 1.00 65.39 O
ATOM 9 C3' G B 39 -110.467 165.366 111.855 1.00 65.39 C
ATOM 10 O3' G B 39 -110.974 166.459 111.100 1.00 65.39 O
ATOM 11 C2' G B 39 -108.939 165.393 112.002 1.00 65.39 C
ATOM 12 O2' G B 39 -108.446 166.727 111.963 1.00 65.39 O
ATOM 13 C1' G B 39 -108.715 164.829 113.411 1.00 65.39 C
ATOM 14 N9 G B 39 -107.994 163.548 113.414 1.00 65.53 N
ATOM 15 C8 G B 39 -108.344 162.381 112.805 1.00 65.53 C
ATOM 16 N7 G B 39 -107.483 161.422 113.024 1.00 65.53 N
ATOM 17 C5 G B 39 -106.512 162.002 113.838 1.00 65.53 C
ATOM 18 C6 G B 39 -105.319 161.463 114.401 1.00 65.53 C
ATOM 19 O6 G B 39 -104.868 160.318 114.287 1.00 65.53 O
ATOM 20 N1 G B 39 -104.618 162.404 115.162 1.00 65.53 N
ATOM 21 C2 G B 39 -105.015 163.704 115.359 1.00 65.53 C
ATOM 22 N2 G B 39 -104.198 164.443 116.126 1.00 65.53 N
ATOM 23 N3 G B 39 -106.124 164.223 114.843 1.00 65.53 N
ATOM 24 C4 G B 39 -106.817 163.323 114.096 1.00 65.53 C
ATOM 25 P C B 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 26 OP1 C B 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 27 OP2 C B 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 28 O5' C B 40 -112.157 165.096 109.368 1.00 44.89 O
TER
ATOM 2 P C A 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 3 OP1 C A 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 4 OP2 C A 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 5 O5' C A 40 -112.157 165.096 109.368 1.00 44.89 O
ATOM 6 C5' C A 40 -113.475 165.160 109.877 1.00 44.89 C
ATOM 7 C4' C A 40 -114.447 164.424 108.994 1.00 44.89 C
ATOM 8 O4' C A 40 -114.293 162.998 109.193 1.00 44.89 O
ATOM 9 C3' C A 40 -115.925 164.696 109.269 1.00 44.89 C
ATOM 10 O3' C A 40 -116.401 165.856 108.605 1.00 44.89 O
ATOM 11 C2' C A 40 -116.611 163.419 108.807 1.00 44.89 C
ATOM 12 O2' C A 40 -116.887 163.480 107.418 1.00 44.89 O
ATOM 13 C1' C A 40 -115.535 162.354 109.047 1.00 44.89 C
ATOM 14 N1 C A 40 -115.792 161.535 110.245 1.00 44.60 N
ATOM 15 C2 C A 40 -116.555 160.387 110.031 1.00 44.60 C
ATOM 16 O2 C A 40 -116.969 160.195 108.868 1.00 44.60 O
ATOM 17 N3 C A 40 -116.818 159.542 111.070 1.00 44.60 N
ATOM 18 C4 C A 40 -116.338 159.818 112.296 1.00 44.60 C
ATOM 19 N4 C A 40 -116.625 158.969 113.306 1.00 44.60 N
ATOM 20 C5 C A 40 -115.541 160.996 112.530 1.00 44.60 C
ATOM 21 C6 C A 40 -115.284 161.812 111.486 1.00 44.60 C
ATOM 22 P C A 41 -117.540 166.770 109.278 1.00 50.84 P
ATOM 23 OP1 C A 41 -118.149 167.570 108.191 1.00 50.84 O
ATOM 24 OP2 C A 41 -116.914 167.486 110.422 1.00 50.84 O
ATOM 25 O5' C A 41 -118.593 165.696 109.810 1.00 50.84 O
TER
ATOM 1 O3' U B 38 -115.001 164.828 114.752 1.00 61.61 O
ATOM 2 P G B 39 -113.899 163.906 115.473 1.00 65.39 P
ATOM 3 OP1 G B 39 -114.074 162.517 114.955 1.00 65.39 O
ATOM 4 OP2 G B 39 -114.028 164.143 116.929 1.00 65.39 O
ATOM 5 O5' G B 39 -112.527 164.521 114.938 1.00 65.39 O
ATOM 6 C5' G B 39 -112.320 164.763 113.549 1.00 65.39 C
ATOM 7 C4' G B 39 -110.968 165.379 113.296 1.00 65.39 C
ATOM 8 O4' G B 39 -109.965 164.653 114.025 1.00 65.39 O
ATOM 9 C3' G B 39 -110.467 165.366 111.855 1.00 65.39 C
ATOM 10 O3' G B 39 -110.974 166.459 111.100 1.00 65.39 O
ATOM 11 C2' G B 39 -108.939 165.393 112.002 1.00 65.39 C
ATOM 12 O2' G B 39 -108.446 166.727 111.963 1.00 65.39 O
ATOM 13 C1' G B 39 -108.715 164.829 113.411 1.00 65.39 C
ATOM 14 N9 G B 39 -107.994 163.548 113.414 1.00 65.53 N
ATOM 15 C8 G B 39 -108.344 162.381 112.805 1.00 65.53 C
ATOM 16 N7 G B 39 -107.483 161.422 113.024 1.00 65.53 N
ATOM 17 C5 G B 39 -106.512 162.002 113.838 1.00 65.53 C
ATOM 18 C6 G B 39 -105.319 161.463 114.401 1.00 65.53 C
ATOM 19 O6 G B 39 -104.868 160.318 114.287 1.00 65.53 O
ATOM 20 N1 G B 39 -104.618 162.404 115.162 1.00 65.53 N
ATOM 21 C2 G B 39 -105.015 163.704 115.359 1.00 65.53 C
ATOM 22 N2 G B 39 -104.198 164.443 116.126 1.00 65.53 N
ATOM 23 N3 G B 39 -106.124 164.223 114.843 1.00 65.53 N
ATOM 24 C4 G B 39 -106.817 163.323 114.096 1.00 65.53 C
ATOM 25 P C B 40 -111.179 166.343 109.506 1.00 44.89 P
ATOM 26 OP1 C B 40 -109.849 166.019 108.902 1.00 44.89 O
ATOM 27 OP2 C B 40 -111.877 167.591 109.075 1.00 44.89 O
ATOM 28 O5' C B 40 -112.157 165.096 109.368 1.00 44.89 O
TER
Atoms:
C2: (-116.555,160.387,110.031)
OP1: (-109.849,166.019,108.902)
OP2: (-111.877,167.591,109.075)
C4: (-116.338,159.818,112.296)
O5': (-112.157,165.096,109.368)
C3': (-115.925,164.696,109.269)
C1': (-115.535,162.354,109.047)
O4': (-114.293,162.998,109.193)
C5': (-113.475,165.160,109.877)
P: (-111.179,166.343,109.506)
O2: (-116.969,160.195,108.868)
C4': (-114.447,164.424,108.994)
C2': (-116.611,163.419,108.807)
O2': (-116.887,163.480,107.418)
N1: (-115.792,161.535,110.245)
N3: (-116.818,159.542,111.070)
N4: (-116.625,158.969,113.306)
C6: (-115.284,161.812,111.486)
C5: (-115.541,160.996,112.530)
O3': (-116.401,165.856,108.605)
OP1: (-109.849,166.019,108.902)
OP2: (-111.877,167.591,109.075)
C4: (-116.338,159.818,112.296)
O5': (-112.157,165.096,109.368)
C3': (-115.925,164.696,109.269)
C1': (-115.535,162.354,109.047)
O4': (-114.293,162.998,109.193)
C5': (-113.475,165.160,109.877)
P: (-111.179,166.343,109.506)
O2: (-116.969,160.195,108.868)
C4': (-114.447,164.424,108.994)
C2': (-116.611,163.419,108.807)
O2': (-116.887,163.480,107.418)
N1: (-115.792,161.535,110.245)
N3: (-116.818,159.542,111.070)
N4: (-116.625,158.969,113.306)
C6: (-115.284,161.812,111.486)
C5: (-115.541,160.996,112.530)
O3': (-116.401,165.856,108.605)
OP1: (-114.074,162.517,114.955)
OP2: (-114.028,164.143,116.929)
C3': (-110.467,165.366,111.855)
C1': (-108.715,164.829,113.411)
C5': (-112.320,164.763,113.549)
O6: (-104.868,160.318,114.287)
O4': (-109.965,164.653,114.025)
C8: (-108.344,162.381,112.805)
C2: (-105.015,163.704,115.359)
C6: (-105.319,161.463,114.401)
C5: (-106.512,162.002,113.838)
C4: (-106.817,163.323,114.096)
P: (-113.899,163.906,115.473)
C4': (-110.968,165.379,113.296)
C2': (-108.939,165.393,112.002)
O2': (-108.446,166.727,111.963)
N1: (-104.618,162.404,115.162)
N2: (-104.198,164.443,116.126)
N3: (-106.124,164.223,114.843)
N7: (-107.483,161.422,113.024)
N9: (-107.994,163.548,113.414)
O5': (-112.527,164.521,114.938)
O3': (-110.974,166.459,111.100)
OP2: (-114.028,164.143,116.929)
C3': (-110.467,165.366,111.855)
C1': (-108.715,164.829,113.411)
C5': (-112.320,164.763,113.549)
O6: (-104.868,160.318,114.287)
O4': (-109.965,164.653,114.025)
C8: (-108.344,162.381,112.805)
C2: (-105.015,163.704,115.359)
C6: (-105.319,161.463,114.401)
C5: (-106.512,162.002,113.838)
C4: (-106.817,163.323,114.096)
P: (-113.899,163.906,115.473)
C4': (-110.968,165.379,113.296)
C2': (-108.939,165.393,112.002)
O2': (-108.446,166.727,111.963)
N1: (-104.618,162.404,115.162)
N2: (-104.198,164.443,116.126)
N3: (-106.124,164.223,114.843)
N7: (-107.483,161.422,113.024)
N9: (-107.994,163.548,113.414)
O5': (-112.527,164.521,114.938)
O3': (-110.974,166.459,111.100)
Image (generated by PyMOL):