Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2350:2630
Extra
PDB:
ATOM 1 O3' U A 349 -53.674 37.700 97.370 1.00 58.58 O
ATOM 2 P C A 350 -54.970 37.971 98.258 1.00 58.71 P
ATOM 3 OP1 C A 350 -54.484 38.509 99.556 1.00 58.85 O
ATOM 4 OP2 C A 350 -55.762 36.711 98.253 1.00 58.95 O
ATOM 5 O5' C A 350 -55.743 39.107 97.446 1.00 58.88 O
ATOM 6 C5' C A 350 -55.841 39.056 96.038 1.00 58.64 C
ATOM 7 C4' C A 350 -56.144 40.404 95.460 1.00 58.75 C
ATOM 8 O4' C A 350 -57.164 41.030 96.259 1.00 59.35 O
ATOM 9 C3' C A 350 -54.976 41.386 95.436 1.00 58.38 C
ATOM 10 O3' C A 350 -55.092 42.225 94.281 1.00 58.31 O
ATOM 11 C2' C A 350 -55.210 42.216 96.696 1.00 58.78 C
ATOM 12 O2' C A 350 -54.617 43.498 96.680 1.00 58.69 O
ATOM 13 C1' C A 350 -56.721 42.293 96.707 1.00 59.37 C
ATOM 14 N1 C A 350 -57.299 42.529 98.030 1.00 59.89 N
ATOM 15 C2 C A 350 -57.780 43.792 98.386 1.00 60.30 C
ATOM 16 O2 C A 350 -57.694 44.726 97.578 1.00 60.21 O
ATOM 17 N3 C A 350 -58.309 43.977 99.618 1.00 60.81 N
ATOM 18 C4 C A 350 -58.367 42.947 100.463 1.00 60.91 C
ATOM 19 N4 C A 350 -58.887 43.147 101.665 1.00 61.45 N
ATOM 20 C5 C A 350 -57.898 41.654 100.124 1.00 60.51 C
ATOM 21 C6 C A 350 -57.382 41.494 98.906 1.00 60.01 C
ATOM 22 P A A 351 -54.474 41.746 92.874 1.00 59.99 P
ATOM 23 OP1 A A 351 -55.209 42.435 91.800 1.00 60.19 O
ATOM 24 OP2 A A 351 -54.446 40.271 92.891 1.00 59.86 O
ATOM 25 O5' A A 351 -53.009 42.323 92.918 1.00 59.52 O
TER
ATOM 1 O3' A B 629 -55.644 37.928 103.123 1.00 58.47 O
ATOM 2 P G B 630 -57.180 38.339 103.438 1.00 57.44 P
ATOM 3 OP1 G B 630 -57.332 39.780 103.076 1.00 57.49 O
ATOM 4 OP2 G B 630 -57.487 37.920 104.844 1.00 58.15 O
ATOM 5 O5' G B 630 -57.990 37.425 102.403 1.00 57.31 O
ATOM 6 C5' G B 630 -57.773 37.532 100.999 1.00 56.68 C
ATOM 7 C4' G B 630 -58.552 36.492 100.245 1.00 56.69 C
ATOM 8 O4' G B 630 -58.041 35.177 100.553 1.00 56.52 O
ATOM 9 C3' G B 630 -60.019 36.395 100.585 1.00 57.48 C
ATOM 10 O3' G B 630 -60.794 37.373 99.932 1.00 57.68 O
ATOM 11 C2' G B 630 -60.364 34.965 100.178 1.00 57.44 C
ATOM 12 O2' G B 630 -60.560 34.856 98.770 1.00 57.04 O
ATOM 13 C1' G B 630 -59.087 34.235 100.553 1.00 56.96 C
ATOM 14 N9 G B 630 -59.165 33.672 101.896 1.00 57.50 N
ATOM 15 C8 G B 630 -58.570 34.232 102.992 1.00 57.68 C
ATOM 16 N7 G B 630 -58.795 33.532 104.074 1.00 58.23 N
ATOM 17 C5 G B 630 -59.565 32.458 103.653 1.00 58.40 C
ATOM 18 C6 G B 630 -60.099 31.380 104.389 1.00 58.98 C
ATOM 19 O6 G B 630 -60.005 31.100 105.588 1.00 59.49 O
ATOM 20 N1 G B 630 -60.807 30.541 103.551 1.00 58.98 N
ATOM 21 C2 G B 630 -60.990 30.731 102.202 1.00 58.50 C
ATOM 22 N2 G B 630 -61.747 29.808 101.594 1.00 58.66 N
ATOM 23 N3 G B 630 -60.481 31.728 101.509 1.00 57.96 N
ATOM 24 C4 G B 630 -59.795 32.538 102.302 1.00 57.94 C
ATOM 25 P U B 631 -62.129 37.899 100.613 1.00 59.49 P
ATOM 26 OP1 U B 631 -62.690 38.938 99.704 1.00 59.55 O
ATOM 27 OP2 U B 631 -61.802 38.252 102.022 1.00 59.88 O
ATOM 28 O5' U B 631 -63.049 36.613 100.601 1.00 59.86 O
TER
ATOM 2 P C A 350 -54.970 37.971 98.258 1.00 58.71 P
ATOM 3 OP1 C A 350 -54.484 38.509 99.556 1.00 58.85 O
ATOM 4 OP2 C A 350 -55.762 36.711 98.253 1.00 58.95 O
ATOM 5 O5' C A 350 -55.743 39.107 97.446 1.00 58.88 O
ATOM 6 C5' C A 350 -55.841 39.056 96.038 1.00 58.64 C
ATOM 7 C4' C A 350 -56.144 40.404 95.460 1.00 58.75 C
ATOM 8 O4' C A 350 -57.164 41.030 96.259 1.00 59.35 O
ATOM 9 C3' C A 350 -54.976 41.386 95.436 1.00 58.38 C
ATOM 10 O3' C A 350 -55.092 42.225 94.281 1.00 58.31 O
ATOM 11 C2' C A 350 -55.210 42.216 96.696 1.00 58.78 C
ATOM 12 O2' C A 350 -54.617 43.498 96.680 1.00 58.69 O
ATOM 13 C1' C A 350 -56.721 42.293 96.707 1.00 59.37 C
ATOM 14 N1 C A 350 -57.299 42.529 98.030 1.00 59.89 N
ATOM 15 C2 C A 350 -57.780 43.792 98.386 1.00 60.30 C
ATOM 16 O2 C A 350 -57.694 44.726 97.578 1.00 60.21 O
ATOM 17 N3 C A 350 -58.309 43.977 99.618 1.00 60.81 N
ATOM 18 C4 C A 350 -58.367 42.947 100.463 1.00 60.91 C
ATOM 19 N4 C A 350 -58.887 43.147 101.665 1.00 61.45 N
ATOM 20 C5 C A 350 -57.898 41.654 100.124 1.00 60.51 C
ATOM 21 C6 C A 350 -57.382 41.494 98.906 1.00 60.01 C
ATOM 22 P A A 351 -54.474 41.746 92.874 1.00 59.99 P
ATOM 23 OP1 A A 351 -55.209 42.435 91.800 1.00 60.19 O
ATOM 24 OP2 A A 351 -54.446 40.271 92.891 1.00 59.86 O
ATOM 25 O5' A A 351 -53.009 42.323 92.918 1.00 59.52 O
TER
ATOM 1 O3' A B 629 -55.644 37.928 103.123 1.00 58.47 O
ATOM 2 P G B 630 -57.180 38.339 103.438 1.00 57.44 P
ATOM 3 OP1 G B 630 -57.332 39.780 103.076 1.00 57.49 O
ATOM 4 OP2 G B 630 -57.487 37.920 104.844 1.00 58.15 O
ATOM 5 O5' G B 630 -57.990 37.425 102.403 1.00 57.31 O
ATOM 6 C5' G B 630 -57.773 37.532 100.999 1.00 56.68 C
ATOM 7 C4' G B 630 -58.552 36.492 100.245 1.00 56.69 C
ATOM 8 O4' G B 630 -58.041 35.177 100.553 1.00 56.52 O
ATOM 9 C3' G B 630 -60.019 36.395 100.585 1.00 57.48 C
ATOM 10 O3' G B 630 -60.794 37.373 99.932 1.00 57.68 O
ATOM 11 C2' G B 630 -60.364 34.965 100.178 1.00 57.44 C
ATOM 12 O2' G B 630 -60.560 34.856 98.770 1.00 57.04 O
ATOM 13 C1' G B 630 -59.087 34.235 100.553 1.00 56.96 C
ATOM 14 N9 G B 630 -59.165 33.672 101.896 1.00 57.50 N
ATOM 15 C8 G B 630 -58.570 34.232 102.992 1.00 57.68 C
ATOM 16 N7 G B 630 -58.795 33.532 104.074 1.00 58.23 N
ATOM 17 C5 G B 630 -59.565 32.458 103.653 1.00 58.40 C
ATOM 18 C6 G B 630 -60.099 31.380 104.389 1.00 58.98 C
ATOM 19 O6 G B 630 -60.005 31.100 105.588 1.00 59.49 O
ATOM 20 N1 G B 630 -60.807 30.541 103.551 1.00 58.98 N
ATOM 21 C2 G B 630 -60.990 30.731 102.202 1.00 58.50 C
ATOM 22 N2 G B 630 -61.747 29.808 101.594 1.00 58.66 N
ATOM 23 N3 G B 630 -60.481 31.728 101.509 1.00 57.96 N
ATOM 24 C4 G B 630 -59.795 32.538 102.302 1.00 57.94 C
ATOM 25 P U B 631 -62.129 37.899 100.613 1.00 59.49 P
ATOM 26 OP1 U B 631 -62.690 38.938 99.704 1.00 59.55 O
ATOM 27 OP2 U B 631 -61.802 38.252 102.022 1.00 59.88 O
ATOM 28 O5' U B 631 -63.049 36.613 100.601 1.00 59.86 O
TER
Atoms:
C2: (-57.780,43.792,98.386)
OP1: (-54.484,38.509,99.556)
OP2: (-55.762,36.711,98.253)
C4: (-58.367,42.947,100.463)
O5': (-55.743,39.107,97.446)
C3': (-54.976,41.386,95.436)
C1': (-56.721,42.293,96.707)
O4': (-57.164,41.030,96.259)
C5': (-55.841,39.056,96.038)
P: (-54.970,37.971,98.258)
O2: (-57.694,44.726,97.578)
C4': (-56.144,40.404,95.460)
C2': (-55.210,42.216,96.696)
O2': (-54.617,43.498,96.680)
N1: (-57.299,42.529,98.030)
N3: (-58.309,43.977,99.618)
N4: (-58.887,43.147,101.665)
C6: (-57.382,41.494,98.906)
C5: (-57.898,41.654,100.124)
O3': (-55.092,42.225,94.281)
OP1: (-54.484,38.509,99.556)
OP2: (-55.762,36.711,98.253)
C4: (-58.367,42.947,100.463)
O5': (-55.743,39.107,97.446)
C3': (-54.976,41.386,95.436)
C1': (-56.721,42.293,96.707)
O4': (-57.164,41.030,96.259)
C5': (-55.841,39.056,96.038)
P: (-54.970,37.971,98.258)
O2: (-57.694,44.726,97.578)
C4': (-56.144,40.404,95.460)
C2': (-55.210,42.216,96.696)
O2': (-54.617,43.498,96.680)
N1: (-57.299,42.529,98.030)
N3: (-58.309,43.977,99.618)
N4: (-58.887,43.147,101.665)
C6: (-57.382,41.494,98.906)
C5: (-57.898,41.654,100.124)
O3': (-55.092,42.225,94.281)
OP1: (-57.332,39.780,103.076)
OP2: (-57.487,37.920,104.844)
C3': (-60.019,36.395,100.585)
C1': (-59.087,34.235,100.553)
C5': (-57.773,37.532,100.999)
O6: (-60.005,31.100,105.588)
O4': (-58.041,35.177,100.553)
C8: (-58.570,34.232,102.992)
C2: (-60.990,30.731,102.202)
C6: (-60.099,31.380,104.389)
C5: (-59.565,32.458,103.653)
C4: (-59.795,32.538,102.302)
P: (-57.180,38.339,103.438)
C4': (-58.552,36.492,100.245)
C2': (-60.364,34.965,100.178)
O2': (-60.560,34.856,98.770)
N1: (-60.807,30.541,103.551)
N2: (-61.747,29.808,101.594)
N3: (-60.481,31.728,101.509)
N7: (-58.795,33.532,104.074)
N9: (-59.165,33.672,101.896)
O5': (-57.990,37.425,102.403)
O3': (-60.794,37.373,99.932)
OP2: (-57.487,37.920,104.844)
C3': (-60.019,36.395,100.585)
C1': (-59.087,34.235,100.553)
C5': (-57.773,37.532,100.999)
O6: (-60.005,31.100,105.588)
O4': (-58.041,35.177,100.553)
C8: (-58.570,34.232,102.992)
C2: (-60.990,30.731,102.202)
C6: (-60.099,31.380,104.389)
C5: (-59.565,32.458,103.653)
C4: (-59.795,32.538,102.302)
P: (-57.180,38.339,103.438)
C4': (-58.552,36.492,100.245)
C2': (-60.364,34.965,100.178)
O2': (-60.560,34.856,98.770)
N1: (-60.807,30.541,103.551)
N2: (-61.747,29.808,101.594)
N3: (-60.481,31.728,101.509)
N7: (-58.795,33.532,104.074)
N9: (-59.165,33.672,101.896)
O5': (-57.990,37.425,102.403)
O3': (-60.794,37.373,99.932)
Image (generated by PyMOL):