Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11076:11075
Extra
PDB:
ATOM 1 O3' G A1075 34.992 -9.818 42.969 1.00 41.95 O
ATOM 2 P C A1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 3 OP1 C A1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 4 OP2 C A1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 5 O5' C A1076 33.341 -11.675 43.428 1.00 40.32 O
ATOM 6 C5' C A1076 32.475 -10.957 44.279 1.00 40.23 C
ATOM 7 C4' C A1076 31.368 -11.824 44.826 1.00 40.24 C
ATOM 8 O4' C A1076 30.356 -12.066 43.825 1.00 40.46 O
ATOM 9 C3' C A1076 31.752 -13.210 45.310 1.00 40.19 C
ATOM 10 O3' C A1076 32.309 -13.176 46.603 1.00 39.98 O
ATOM 11 C2' C A1076 30.421 -13.906 45.292 1.00 40.30 C
ATOM 12 O2' C A1076 29.650 -13.481 46.401 1.00 40.19 O
ATOM 13 C1' C A1076 29.780 -13.317 44.044 1.00 40.50 C
ATOM 14 N1 C A1076 29.986 -14.165 42.863 1.00 40.69 N
ATOM 15 C2 C A1076 29.270 -15.323 42.888 1.00 40.79 C
ATOM 16 O2 C A1076 28.568 -15.582 43.835 1.00 40.71 O
ATOM 17 N3 C A1076 29.334 -16.195 41.904 1.00 40.98 N
ATOM 18 C4 C A1076 30.098 -15.942 40.881 1.00 41.08 C
ATOM 19 N4 C A1076 30.057 -16.888 39.987 1.00 41.29 N
ATOM 20 C5 C A1076 30.852 -14.755 40.771 1.00 40.99 C
ATOM 21 C6 C A1076 30.768 -13.887 41.793 1.00 40.80 C
ATOM 22 P A A1077 33.367 -14.264 47.065 1.00 35.02 P
ATOM 23 OP1 A A1077 33.816 -13.882 48.436 1.00 34.82 O
ATOM 24 OP2 A A1077 34.348 -14.333 46.041 1.00 35.11 O
ATOM 25 O5' A A1077 32.502 -15.596 47.097 1.00 35.12 O
TER
ATOM 1 O3' A B1074 32.188 -10.101 39.278 1.00 38.11 O
ATOM 2 P G B1075 33.129 -10.976 38.281 1.00 42.85 P
ATOM 3 OP1 G B1075 33.064 -10.334 36.910 1.00 43.09 O
ATOM 4 OP2 G B1075 32.743 -12.404 38.450 1.00 42.88 O
ATOM 5 O5' G B1075 34.571 -10.759 38.888 1.00 42.65 O
ATOM 6 C5' G B1075 35.012 -9.478 39.247 1.00 42.54 C
ATOM 7 C4' G B1075 35.535 -9.466 40.636 1.00 42.28 C
ATOM 8 O4' G B1075 36.376 -8.300 40.779 1.00 42.21 O
ATOM 9 C3' G B1075 34.471 -9.343 41.718 1.00 42.17 C
ATOM 10 O3' G B1075 34.992 -9.818 42.969 1.00 41.95 O
ATOM 11 C2' G B1075 34.353 -7.845 41.817 1.00 42.15 C
ATOM 12 O2' G B1075 33.774 -7.396 43.005 1.00 42.00 O
ATOM 13 C1' G B1075 35.823 -7.454 41.748 1.00 42.09 C
ATOM 14 N9 G B1075 36.058 -6.084 41.328 1.00 42.15 N
ATOM 15 C8 G B1075 35.393 -5.496 40.303 1.00 42.35 C
ATOM 16 N7 G B1075 35.761 -4.279 40.095 1.00 42.39 N
ATOM 17 C5 G B1075 36.726 -4.068 41.042 1.00 42.19 C
ATOM 18 C6 G B1075 37.447 -2.908 41.260 1.00 42.16 C
ATOM 19 O6 G B1075 37.368 -1.847 40.646 1.00 42.29 O
ATOM 20 N1 G B1075 38.300 -3.037 42.305 1.00 41.96 N
ATOM 21 C2 G B1075 38.457 -4.150 43.040 1.00 41.82 C
ATOM 22 N2 G B1075 39.381 -3.977 43.986 1.00 41.66 N
ATOM 23 N3 G B1075 37.789 -5.278 42.868 1.00 41.85 N
ATOM 24 C4 G B1075 36.932 -5.154 41.834 1.00 42.04 C
ATOM 25 P C B1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 26 OP1 C B1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 27 OP2 C B1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 28 O5' C B1076 33.341 -11.675 43.428 1.00 40.32 O
TER
ATOM 2 P C A1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 3 OP1 C A1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 4 OP2 C A1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 5 O5' C A1076 33.341 -11.675 43.428 1.00 40.32 O
ATOM 6 C5' C A1076 32.475 -10.957 44.279 1.00 40.23 C
ATOM 7 C4' C A1076 31.368 -11.824 44.826 1.00 40.24 C
ATOM 8 O4' C A1076 30.356 -12.066 43.825 1.00 40.46 O
ATOM 9 C3' C A1076 31.752 -13.210 45.310 1.00 40.19 C
ATOM 10 O3' C A1076 32.309 -13.176 46.603 1.00 39.98 O
ATOM 11 C2' C A1076 30.421 -13.906 45.292 1.00 40.30 C
ATOM 12 O2' C A1076 29.650 -13.481 46.401 1.00 40.19 O
ATOM 13 C1' C A1076 29.780 -13.317 44.044 1.00 40.50 C
ATOM 14 N1 C A1076 29.986 -14.165 42.863 1.00 40.69 N
ATOM 15 C2 C A1076 29.270 -15.323 42.888 1.00 40.79 C
ATOM 16 O2 C A1076 28.568 -15.582 43.835 1.00 40.71 O
ATOM 17 N3 C A1076 29.334 -16.195 41.904 1.00 40.98 N
ATOM 18 C4 C A1076 30.098 -15.942 40.881 1.00 41.08 C
ATOM 19 N4 C A1076 30.057 -16.888 39.987 1.00 41.29 N
ATOM 20 C5 C A1076 30.852 -14.755 40.771 1.00 40.99 C
ATOM 21 C6 C A1076 30.768 -13.887 41.793 1.00 40.80 C
ATOM 22 P A A1077 33.367 -14.264 47.065 1.00 35.02 P
ATOM 23 OP1 A A1077 33.816 -13.882 48.436 1.00 34.82 O
ATOM 24 OP2 A A1077 34.348 -14.333 46.041 1.00 35.11 O
ATOM 25 O5' A A1077 32.502 -15.596 47.097 1.00 35.12 O
TER
ATOM 1 O3' A B1074 32.188 -10.101 39.278 1.00 38.11 O
ATOM 2 P G B1075 33.129 -10.976 38.281 1.00 42.85 P
ATOM 3 OP1 G B1075 33.064 -10.334 36.910 1.00 43.09 O
ATOM 4 OP2 G B1075 32.743 -12.404 38.450 1.00 42.88 O
ATOM 5 O5' G B1075 34.571 -10.759 38.888 1.00 42.65 O
ATOM 6 C5' G B1075 35.012 -9.478 39.247 1.00 42.54 C
ATOM 7 C4' G B1075 35.535 -9.466 40.636 1.00 42.28 C
ATOM 8 O4' G B1075 36.376 -8.300 40.779 1.00 42.21 O
ATOM 9 C3' G B1075 34.471 -9.343 41.718 1.00 42.17 C
ATOM 10 O3' G B1075 34.992 -9.818 42.969 1.00 41.95 O
ATOM 11 C2' G B1075 34.353 -7.845 41.817 1.00 42.15 C
ATOM 12 O2' G B1075 33.774 -7.396 43.005 1.00 42.00 O
ATOM 13 C1' G B1075 35.823 -7.454 41.748 1.00 42.09 C
ATOM 14 N9 G B1075 36.058 -6.084 41.328 1.00 42.15 N
ATOM 15 C8 G B1075 35.393 -5.496 40.303 1.00 42.35 C
ATOM 16 N7 G B1075 35.761 -4.279 40.095 1.00 42.39 N
ATOM 17 C5 G B1075 36.726 -4.068 41.042 1.00 42.19 C
ATOM 18 C6 G B1075 37.447 -2.908 41.260 1.00 42.16 C
ATOM 19 O6 G B1075 37.368 -1.847 40.646 1.00 42.29 O
ATOM 20 N1 G B1075 38.300 -3.037 42.305 1.00 41.96 N
ATOM 21 C2 G B1075 38.457 -4.150 43.040 1.00 41.82 C
ATOM 22 N2 G B1075 39.381 -3.977 43.986 1.00 41.66 N
ATOM 23 N3 G B1075 37.789 -5.278 42.868 1.00 41.85 N
ATOM 24 C4 G B1075 36.932 -5.154 41.834 1.00 42.04 C
ATOM 25 P C B1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 26 OP1 C B1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 27 OP2 C B1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 28 O5' C B1076 33.341 -11.675 43.428 1.00 40.32 O
TER
Atoms:
C2: (29.270,-15.323,42.888)
OP1: (35.428,-11.445,44.780)
OP2: (35.565,-12.175,42.369)
C4: (30.098,-15.942,40.881)
O5': (33.341,-11.675,43.428)
C3': (31.752,-13.210,45.310)
C1': (29.780,-13.317,44.044)
O4': (30.356,-12.066,43.825)
C5': (32.475,-10.957,44.279)
P: (34.904,-11.371,43.416)
O2: (28.568,-15.582,43.835)
C4': (31.368,-11.824,44.826)
C2': (30.421,-13.906,45.292)
O2': (29.650,-13.481,46.401)
N1: (29.986,-14.165,42.863)
N3: (29.334,-16.195,41.904)
N4: (30.057,-16.888,39.987)
C6: (30.768,-13.887,41.793)
C5: (30.852,-14.755,40.771)
O3': (32.309,-13.176,46.603)
OP1: (35.428,-11.445,44.780)
OP2: (35.565,-12.175,42.369)
C4: (30.098,-15.942,40.881)
O5': (33.341,-11.675,43.428)
C3': (31.752,-13.210,45.310)
C1': (29.780,-13.317,44.044)
O4': (30.356,-12.066,43.825)
C5': (32.475,-10.957,44.279)
P: (34.904,-11.371,43.416)
O2: (28.568,-15.582,43.835)
C4': (31.368,-11.824,44.826)
C2': (30.421,-13.906,45.292)
O2': (29.650,-13.481,46.401)
N1: (29.986,-14.165,42.863)
N3: (29.334,-16.195,41.904)
N4: (30.057,-16.888,39.987)
C6: (30.768,-13.887,41.793)
C5: (30.852,-14.755,40.771)
O3': (32.309,-13.176,46.603)
OP1: (33.064,-10.334,36.910)
OP2: (32.743,-12.404,38.450)
C3': (34.471,-9.343,41.718)
C1': (35.823,-7.454,41.748)
C5': (35.012,-9.478,39.247)
O6: (37.368,-1.847,40.646)
O4': (36.376,-8.300,40.779)
C8: (35.393,-5.496,40.303)
C2: (38.457,-4.150,43.040)
C6: (37.447,-2.908,41.260)
C5: (36.726,-4.068,41.042)
C4: (36.932,-5.154,41.834)
P: (33.129,-10.976,38.281)
C4': (35.535,-9.466,40.636)
C2': (34.353,-7.845,41.817)
O2': (33.774,-7.396,43.005)
N1: (38.300,-3.037,42.305)
N2: (39.381,-3.977,43.986)
N3: (37.789,-5.278,42.868)
N7: (35.761,-4.279,40.095)
N9: (36.058,-6.084,41.328)
O5': (34.571,-10.759,38.888)
O3': (34.992,-9.818,42.969)
OP2: (32.743,-12.404,38.450)
C3': (34.471,-9.343,41.718)
C1': (35.823,-7.454,41.748)
C5': (35.012,-9.478,39.247)
O6: (37.368,-1.847,40.646)
O4': (36.376,-8.300,40.779)
C8: (35.393,-5.496,40.303)
C2: (38.457,-4.150,43.040)
C6: (37.447,-2.908,41.260)
C5: (36.726,-4.068,41.042)
C4: (36.932,-5.154,41.834)
P: (33.129,-10.976,38.281)
C4': (35.535,-9.466,40.636)
C2': (34.353,-7.845,41.817)
O2': (33.774,-7.396,43.005)
N1: (38.300,-3.037,42.305)
N2: (39.381,-3.977,43.986)
N3: (37.789,-5.278,42.868)
N7: (35.761,-4.279,40.095)
N9: (36.058,-6.084,41.328)
O5': (34.571,-10.759,38.888)
O3': (34.992,-9.818,42.969)
Image (generated by PyMOL):