Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:139:138
Extra
PDB:
ATOM 1 O3' G A 38 34.956 -24.013 82.400 1.00 36.06 O
ATOM 2 P C A 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 3 OP1 C A 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 4 OP2 C A 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 5 O5' C A 39 34.558 -24.502 84.858 1.00 39.77 O
ATOM 6 C5' C A 39 33.170 -24.431 84.534 1.00 39.75 C
ATOM 7 C4' C A 39 32.392 -25.559 85.159 1.00 39.94 C
ATOM 8 O4' C A 39 32.386 -26.675 84.251 1.00 39.96 O
ATOM 9 C3' C A 39 32.950 -26.129 86.448 1.00 40.13 C
ATOM 10 O3' C A 39 32.573 -25.382 87.581 1.00 40.21 O
ATOM 11 C2' C A 39 32.433 -27.565 86.449 1.00 40.30 C
ATOM 12 O2' C A 39 31.089 -27.641 86.934 1.00 40.40 O
ATOM 13 C1' C A 39 32.437 -27.890 84.953 1.00 40.16 C
ATOM 14 N1 C A 39 33.669 -28.614 84.527 1.00 40.17 N
ATOM 15 C2 C A 39 33.800 -29.946 84.880 1.00 40.36 C
ATOM 16 O2 C A 39 32.917 -30.437 85.545 1.00 40.51 O
ATOM 17 N3 C A 39 34.887 -30.644 84.527 1.00 40.39 N
ATOM 18 C4 C A 39 35.841 -30.035 83.809 1.00 40.23 C
ATOM 19 N4 C A 39 36.875 -30.798 83.479 1.00 40.29 N
ATOM 20 C5 C A 39 35.778 -28.657 83.402 1.00 40.02 C
ATOM 21 C6 C A 39 34.673 -27.986 83.784 1.00 40.00 C
ATOM 22 P A A 40 33.348 -25.547 88.982 1.00 41.54 P
ATOM 23 OP1 A A 40 33.149 -24.295 89.771 1.00 41.54 O
ATOM 24 OP2 A A 40 34.719 -25.996 88.686 1.00 41.52 O
ATOM 25 O5' A A 40 32.558 -26.725 89.640 1.00 41.76 O
TER
ATOM 1 O3' A B 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 2 P G B 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 3 OP1 G B 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 4 OP2 G B 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 5 O5' G B 38 37.369 -26.458 80.365 1.00 36.08 O
ATOM 6 C5' G B 38 37.077 -25.093 80.081 1.00 35.93 C
ATOM 7 C4' G B 38 35.606 -24.787 80.137 1.00 35.92 C
ATOM 8 O4' G B 38 34.917 -25.622 79.171 1.00 35.94 O
ATOM 9 C3' G B 38 34.892 -25.074 81.458 1.00 36.07 C
ATOM 10 O3' G B 38 34.956 -24.013 82.400 1.00 36.06 O
ATOM 11 C2' G B 38 33.480 -25.347 81.004 1.00 36.09 C
ATOM 12 O2' G B 38 32.824 -24.128 80.692 1.00 35.97 O
ATOM 13 C1' G B 38 33.733 -26.120 79.717 1.00 36.05 C
ATOM 14 N9 G B 38 33.912 -27.549 79.991 1.00 36.22 N
ATOM 15 C8 G B 38 34.962 -28.377 79.792 1.00 36.28 C
ATOM 16 N7 G B 38 34.778 -29.598 80.205 1.00 36.46 N
ATOM 17 C5 G B 38 33.516 -29.542 80.708 1.00 36.52 C
ATOM 18 C6 G B 38 32.766 -30.545 81.293 1.00 36.71 C
ATOM 19 O6 G B 38 33.056 -31.706 81.462 1.00 36.87 O
ATOM 20 N1 G B 38 31.509 -30.106 81.669 1.00 36.73 N
ATOM 21 C2 G B 38 31.012 -28.835 81.512 1.00 36.57 C
ATOM 22 N2 G B 38 29.757 -28.664 81.969 1.00 36.64 N
ATOM 23 N3 G B 38 31.715 -27.843 80.971 1.00 36.39 N
ATOM 24 C4 G B 38 32.956 -28.292 80.598 1.00 36.38 C
ATOM 25 P C B 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 26 OP1 C B 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 27 OP2 C B 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 28 O5' C B 39 34.558 -24.502 84.858 1.00 39.77 O
TER
ATOM 2 P C A 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 3 OP1 C A 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 4 OP2 C A 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 5 O5' C A 39 34.558 -24.502 84.858 1.00 39.77 O
ATOM 6 C5' C A 39 33.170 -24.431 84.534 1.00 39.75 C
ATOM 7 C4' C A 39 32.392 -25.559 85.159 1.00 39.94 C
ATOM 8 O4' C A 39 32.386 -26.675 84.251 1.00 39.96 O
ATOM 9 C3' C A 39 32.950 -26.129 86.448 1.00 40.13 C
ATOM 10 O3' C A 39 32.573 -25.382 87.581 1.00 40.21 O
ATOM 11 C2' C A 39 32.433 -27.565 86.449 1.00 40.30 C
ATOM 12 O2' C A 39 31.089 -27.641 86.934 1.00 40.40 O
ATOM 13 C1' C A 39 32.437 -27.890 84.953 1.00 40.16 C
ATOM 14 N1 C A 39 33.669 -28.614 84.527 1.00 40.17 N
ATOM 15 C2 C A 39 33.800 -29.946 84.880 1.00 40.36 C
ATOM 16 O2 C A 39 32.917 -30.437 85.545 1.00 40.51 O
ATOM 17 N3 C A 39 34.887 -30.644 84.527 1.00 40.39 N
ATOM 18 C4 C A 39 35.841 -30.035 83.809 1.00 40.23 C
ATOM 19 N4 C A 39 36.875 -30.798 83.479 1.00 40.29 N
ATOM 20 C5 C A 39 35.778 -28.657 83.402 1.00 40.02 C
ATOM 21 C6 C A 39 34.673 -27.986 83.784 1.00 40.00 C
ATOM 22 P A A 40 33.348 -25.547 88.982 1.00 41.54 P
ATOM 23 OP1 A A 40 33.149 -24.295 89.771 1.00 41.54 O
ATOM 24 OP2 A A 40 34.719 -25.996 88.686 1.00 41.52 O
ATOM 25 O5' A A 40 32.558 -26.725 89.640 1.00 41.76 O
TER
ATOM 1 O3' A B 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 2 P G B 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 3 OP1 G B 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 4 OP2 G B 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 5 O5' G B 38 37.369 -26.458 80.365 1.00 36.08 O
ATOM 6 C5' G B 38 37.077 -25.093 80.081 1.00 35.93 C
ATOM 7 C4' G B 38 35.606 -24.787 80.137 1.00 35.92 C
ATOM 8 O4' G B 38 34.917 -25.622 79.171 1.00 35.94 O
ATOM 9 C3' G B 38 34.892 -25.074 81.458 1.00 36.07 C
ATOM 10 O3' G B 38 34.956 -24.013 82.400 1.00 36.06 O
ATOM 11 C2' G B 38 33.480 -25.347 81.004 1.00 36.09 C
ATOM 12 O2' G B 38 32.824 -24.128 80.692 1.00 35.97 O
ATOM 13 C1' G B 38 33.733 -26.120 79.717 1.00 36.05 C
ATOM 14 N9 G B 38 33.912 -27.549 79.991 1.00 36.22 N
ATOM 15 C8 G B 38 34.962 -28.377 79.792 1.00 36.28 C
ATOM 16 N7 G B 38 34.778 -29.598 80.205 1.00 36.46 N
ATOM 17 C5 G B 38 33.516 -29.542 80.708 1.00 36.52 C
ATOM 18 C6 G B 38 32.766 -30.545 81.293 1.00 36.71 C
ATOM 19 O6 G B 38 33.056 -31.706 81.462 1.00 36.87 O
ATOM 20 N1 G B 38 31.509 -30.106 81.669 1.00 36.73 N
ATOM 21 C2 G B 38 31.012 -28.835 81.512 1.00 36.57 C
ATOM 22 N2 G B 38 29.757 -28.664 81.969 1.00 36.64 N
ATOM 23 N3 G B 38 31.715 -27.843 80.971 1.00 36.39 N
ATOM 24 C4 G B 38 32.956 -28.292 80.598 1.00 36.38 C
ATOM 25 P C B 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 26 OP1 C B 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 27 OP2 C B 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 28 O5' C B 39 34.558 -24.502 84.858 1.00 39.77 O
TER
Atoms:
C2: (33.800,-29.946,84.880)
OP1: (36.436,-23.048,84.098)
OP2: (36.461,-25.447,83.620)
C4: (35.841,-30.035,83.809)
O5': (34.558,-24.502,84.858)
C3': (32.950,-26.129,86.448)
C1': (32.437,-27.890,84.953)
O4': (32.386,-26.675,84.251)
C5': (33.170,-24.431,84.534)
P: (35.707,-24.249,83.788)
O2: (32.917,-30.437,85.545)
C4': (32.392,-25.559,85.159)
C2': (32.433,-27.565,86.449)
O2': (31.089,-27.641,86.934)
N1: (33.669,-28.614,84.527)
N3: (34.887,-30.644,84.527)
N4: (36.875,-30.798,83.479)
C6: (34.673,-27.986,83.784)
C5: (35.778,-28.657,83.402)
O3': (32.573,-25.382,87.581)
OP1: (36.436,-23.048,84.098)
OP2: (36.461,-25.447,83.620)
C4: (35.841,-30.035,83.809)
O5': (34.558,-24.502,84.858)
C3': (32.950,-26.129,86.448)
C1': (32.437,-27.890,84.953)
O4': (32.386,-26.675,84.251)
C5': (33.170,-24.431,84.534)
P: (35.707,-24.249,83.788)
O2: (32.917,-30.437,85.545)
C4': (32.392,-25.559,85.159)
C2': (32.433,-27.565,86.449)
O2': (31.089,-27.641,86.934)
N1: (33.669,-28.614,84.527)
N3: (34.887,-30.644,84.527)
N4: (36.875,-30.798,83.479)
C6: (34.673,-27.986,83.784)
C5: (35.778,-28.657,83.402)
O3': (32.573,-25.382,87.581)
OP1: (38.934,-25.784,82.187)
OP2: (38.632,-28.223,81.692)
C3': (34.892,-25.074,81.458)
C1': (33.733,-26.120,79.717)
C5': (37.077,-25.093,80.081)
O6: (33.056,-31.706,81.462)
O4': (34.917,-25.622,79.171)
C8: (34.962,-28.377,79.792)
C2: (31.012,-28.835,81.512)
C6: (32.766,-30.545,81.293)
C5: (33.516,-29.542,80.708)
C4: (32.956,-28.292,80.598)
P: (38.678,-26.830,81.216)
C4': (35.606,-24.787,80.137)
C2': (33.480,-25.347,81.004)
O2': (32.824,-24.128,80.692)
N1: (31.509,-30.106,81.669)
N2: (29.757,-28.664,81.969)
N3: (31.715,-27.843,80.971)
N7: (34.778,-29.598,80.205)
N9: (33.912,-27.549,79.991)
O5': (37.369,-26.458,80.365)
O3': (34.956,-24.013,82.400)
OP2: (38.632,-28.223,81.692)
C3': (34.892,-25.074,81.458)
C1': (33.733,-26.120,79.717)
C5': (37.077,-25.093,80.081)
O6: (33.056,-31.706,81.462)
O4': (34.917,-25.622,79.171)
C8: (34.962,-28.377,79.792)
C2: (31.012,-28.835,81.512)
C6: (32.766,-30.545,81.293)
C5: (33.516,-29.542,80.708)
C4: (32.956,-28.292,80.598)
P: (38.678,-26.830,81.216)
C4': (35.606,-24.787,80.137)
C2': (33.480,-25.347,81.004)
O2': (32.824,-24.128,80.692)
N1: (31.509,-30.106,81.669)
N2: (29.757,-28.664,81.969)
N3: (31.715,-27.843,80.971)
N7: (34.778,-29.598,80.205)
N9: (33.912,-27.549,79.991)
O5': (37.369,-26.458,80.365)
O3': (34.956,-24.013,82.400)
Image (generated by PyMOL):