Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2881:A2882
Extra
PDB:
ATOM 1 O3' C A2880 -20.868 101.594 220.611 1.00 11.18 O
ATOM 2 P C A2881 -21.779 101.720 221.909 1.00 10.02 P
ATOM 3 OP1 C A2881 -21.373 102.981 222.607 1.00 10.02 O
ATOM 4 OP2 C A2881 -21.671 100.427 222.631 1.00 10.02 O
ATOM 5 O5' C A2881 -23.252 101.876 221.317 1.00 10.02 O
ATOM 6 C5' C A2881 -23.477 102.319 219.992 1.00 10.02 C
ATOM 7 C4' C A2881 -24.357 101.357 219.240 1.00 10.02 C
ATOM 8 O4' C A2881 -23.618 100.158 218.920 1.00 10.02 O
ATOM 9 C3' C A2881 -25.568 100.844 219.986 1.00 10.02 C
ATOM 10 O3' C A2881 -26.638 101.772 219.971 1.00 10.02 O
ATOM 11 C2' C A2881 -25.888 99.536 219.265 1.00 10.02 C
ATOM 12 O2' C A2881 -26.711 99.773 218.141 1.00 10.02 O
ATOM 13 C1' C A2881 -24.511 99.081 218.775 1.00 10.02 C
ATOM 14 N1 C A2881 -23.996 97.931 219.523 1.00 9.93 N
ATOM 15 C2 C A2881 -24.736 96.738 219.472 1.00 9.93 C
ATOM 16 O2 C A2881 -25.801 96.705 218.836 1.00 9.93 O
ATOM 17 N3 C A2881 -24.261 95.658 220.139 1.00 9.93 N
ATOM 18 C4 C A2881 -23.116 95.734 220.832 1.00 9.93 C
ATOM 19 N4 C A2881 -22.687 94.641 221.485 1.00 9.93 N
ATOM 20 C5 C A2881 -22.348 96.951 220.871 1.00 9.93 C
ATOM 21 C6 C A2881 -22.808 98.021 220.204 1.00 9.93 C
ATOM 22 P G A2882 -27.675 101.845 221.198 1.00 14.10 P
ATOM 23 OP1 G A2882 -28.711 102.834 220.824 1.00 14.10 O
ATOM 24 OP2 G A2882 -26.874 102.070 222.442 1.00 14.10 O
ATOM 25 O5' G A2882 -28.312 100.381 221.212 1.00 14.10 O
TER
ATOM 1 O3' C B2881 -26.638 101.772 219.971 1.00 10.02 O
ATOM 2 P G B2882 -27.675 101.845 221.198 1.00 14.10 P
ATOM 3 OP1 G B2882 -28.711 102.834 220.824 1.00 14.10 O
ATOM 4 OP2 G B2882 -26.874 102.070 222.442 1.00 14.10 O
ATOM 5 O5' G B2882 -28.312 100.381 221.212 1.00 14.10 O
ATOM 6 C5' G B2882 -29.241 99.979 220.216 1.00 14.10 C
ATOM 7 C4' G B2882 -29.729 98.577 220.465 1.00 14.10 C
ATOM 8 O4' G B2882 -28.644 97.641 220.283 1.00 14.10 O
ATOM 9 C3' G B2882 -30.243 98.299 221.864 1.00 14.10 C
ATOM 10 O3' G B2882 -31.604 98.656 222.016 1.00 14.10 O
ATOM 11 C2' G B2882 -29.999 96.812 222.044 1.00 14.10 C
ATOM 12 O2' G B2882 -31.069 96.061 221.502 1.00 14.10 O
ATOM 13 C1' G B2882 -28.755 96.580 221.196 1.00 14.10 C
ATOM 14 N9 G B2882 -27.527 96.558 221.993 1.00 13.66 N
ATOM 15 C8 G B2882 -26.823 97.684 222.259 1.00 13.66 C
ATOM 16 N7 G B2882 -25.743 97.425 222.941 1.00 13.66 N
ATOM 17 C5 G B2882 -25.707 96.065 223.120 1.00 13.66 C
ATOM 18 C6 G B2882 -24.748 95.260 223.776 1.00 13.66 C
ATOM 19 O6 G B2882 -23.706 95.567 224.355 1.00 13.66 O
ATOM 20 N1 G B2882 -25.089 93.932 223.736 1.00 13.66 N
ATOM 21 C2 G B2882 -26.200 93.441 223.121 1.00 13.66 C
ATOM 22 N2 G B2882 -26.318 92.115 223.204 1.00 13.66 N
ATOM 23 N3 G B2882 -27.105 94.178 222.485 1.00 13.66 N
ATOM 24 C4 G B2882 -26.805 95.496 222.526 1.00 13.66 C
ATOM 25 P U B2883 -32.088 99.473 223.311 1.00 19.84 P
ATOM 26 OP1 U B2883 -33.584 99.440 223.309 1.00 19.84 O
ATOM 27 OP2 U B2883 -31.399 100.778 223.277 1.00 19.84 O
ATOM 28 O5' U B2883 -31.519 98.596 224.514 1.00 19.84 O
TER
ATOM 2 P C A2881 -21.779 101.720 221.909 1.00 10.02 P
ATOM 3 OP1 C A2881 -21.373 102.981 222.607 1.00 10.02 O
ATOM 4 OP2 C A2881 -21.671 100.427 222.631 1.00 10.02 O
ATOM 5 O5' C A2881 -23.252 101.876 221.317 1.00 10.02 O
ATOM 6 C5' C A2881 -23.477 102.319 219.992 1.00 10.02 C
ATOM 7 C4' C A2881 -24.357 101.357 219.240 1.00 10.02 C
ATOM 8 O4' C A2881 -23.618 100.158 218.920 1.00 10.02 O
ATOM 9 C3' C A2881 -25.568 100.844 219.986 1.00 10.02 C
ATOM 10 O3' C A2881 -26.638 101.772 219.971 1.00 10.02 O
ATOM 11 C2' C A2881 -25.888 99.536 219.265 1.00 10.02 C
ATOM 12 O2' C A2881 -26.711 99.773 218.141 1.00 10.02 O
ATOM 13 C1' C A2881 -24.511 99.081 218.775 1.00 10.02 C
ATOM 14 N1 C A2881 -23.996 97.931 219.523 1.00 9.93 N
ATOM 15 C2 C A2881 -24.736 96.738 219.472 1.00 9.93 C
ATOM 16 O2 C A2881 -25.801 96.705 218.836 1.00 9.93 O
ATOM 17 N3 C A2881 -24.261 95.658 220.139 1.00 9.93 N
ATOM 18 C4 C A2881 -23.116 95.734 220.832 1.00 9.93 C
ATOM 19 N4 C A2881 -22.687 94.641 221.485 1.00 9.93 N
ATOM 20 C5 C A2881 -22.348 96.951 220.871 1.00 9.93 C
ATOM 21 C6 C A2881 -22.808 98.021 220.204 1.00 9.93 C
ATOM 22 P G A2882 -27.675 101.845 221.198 1.00 14.10 P
ATOM 23 OP1 G A2882 -28.711 102.834 220.824 1.00 14.10 O
ATOM 24 OP2 G A2882 -26.874 102.070 222.442 1.00 14.10 O
ATOM 25 O5' G A2882 -28.312 100.381 221.212 1.00 14.10 O
TER
ATOM 1 O3' C B2881 -26.638 101.772 219.971 1.00 10.02 O
ATOM 2 P G B2882 -27.675 101.845 221.198 1.00 14.10 P
ATOM 3 OP1 G B2882 -28.711 102.834 220.824 1.00 14.10 O
ATOM 4 OP2 G B2882 -26.874 102.070 222.442 1.00 14.10 O
ATOM 5 O5' G B2882 -28.312 100.381 221.212 1.00 14.10 O
ATOM 6 C5' G B2882 -29.241 99.979 220.216 1.00 14.10 C
ATOM 7 C4' G B2882 -29.729 98.577 220.465 1.00 14.10 C
ATOM 8 O4' G B2882 -28.644 97.641 220.283 1.00 14.10 O
ATOM 9 C3' G B2882 -30.243 98.299 221.864 1.00 14.10 C
ATOM 10 O3' G B2882 -31.604 98.656 222.016 1.00 14.10 O
ATOM 11 C2' G B2882 -29.999 96.812 222.044 1.00 14.10 C
ATOM 12 O2' G B2882 -31.069 96.061 221.502 1.00 14.10 O
ATOM 13 C1' G B2882 -28.755 96.580 221.196 1.00 14.10 C
ATOM 14 N9 G B2882 -27.527 96.558 221.993 1.00 13.66 N
ATOM 15 C8 G B2882 -26.823 97.684 222.259 1.00 13.66 C
ATOM 16 N7 G B2882 -25.743 97.425 222.941 1.00 13.66 N
ATOM 17 C5 G B2882 -25.707 96.065 223.120 1.00 13.66 C
ATOM 18 C6 G B2882 -24.748 95.260 223.776 1.00 13.66 C
ATOM 19 O6 G B2882 -23.706 95.567 224.355 1.00 13.66 O
ATOM 20 N1 G B2882 -25.089 93.932 223.736 1.00 13.66 N
ATOM 21 C2 G B2882 -26.200 93.441 223.121 1.00 13.66 C
ATOM 22 N2 G B2882 -26.318 92.115 223.204 1.00 13.66 N
ATOM 23 N3 G B2882 -27.105 94.178 222.485 1.00 13.66 N
ATOM 24 C4 G B2882 -26.805 95.496 222.526 1.00 13.66 C
ATOM 25 P U B2883 -32.088 99.473 223.311 1.00 19.84 P
ATOM 26 OP1 U B2883 -33.584 99.440 223.309 1.00 19.84 O
ATOM 27 OP2 U B2883 -31.399 100.778 223.277 1.00 19.84 O
ATOM 28 O5' U B2883 -31.519 98.596 224.514 1.00 19.84 O
TER
Atoms:
C2: (-24.736,96.738,219.472)
OP1: (-21.373,102.981,222.607)
OP2: (-21.671,100.427,222.631)
C4: (-23.116,95.734,220.832)
O5': (-23.252,101.876,221.317)
C3': (-25.568,100.844,219.986)
C1': (-24.511,99.081,218.775)
O4': (-23.618,100.158,218.920)
C5': (-23.477,102.319,219.992)
P: (-21.779,101.720,221.909)
O2: (-25.801,96.705,218.836)
C4': (-24.357,101.357,219.240)
C2': (-25.888,99.536,219.265)
O2': (-26.711,99.773,218.141)
N1: (-23.996,97.931,219.523)
N3: (-24.261,95.658,220.139)
N4: (-22.687,94.641,221.485)
C6: (-22.808,98.021,220.204)
C5: (-22.348,96.951,220.871)
O3': (-26.638,101.772,219.971)
OP1: (-21.373,102.981,222.607)
OP2: (-21.671,100.427,222.631)
C4: (-23.116,95.734,220.832)
O5': (-23.252,101.876,221.317)
C3': (-25.568,100.844,219.986)
C1': (-24.511,99.081,218.775)
O4': (-23.618,100.158,218.920)
C5': (-23.477,102.319,219.992)
P: (-21.779,101.720,221.909)
O2: (-25.801,96.705,218.836)
C4': (-24.357,101.357,219.240)
C2': (-25.888,99.536,219.265)
O2': (-26.711,99.773,218.141)
N1: (-23.996,97.931,219.523)
N3: (-24.261,95.658,220.139)
N4: (-22.687,94.641,221.485)
C6: (-22.808,98.021,220.204)
C5: (-22.348,96.951,220.871)
O3': (-26.638,101.772,219.971)
OP1: (-28.711,102.834,220.824)
OP2: (-26.874,102.070,222.442)
C3': (-30.243,98.299,221.864)
C1': (-28.755,96.580,221.196)
C5': (-29.241,99.979,220.216)
O6: (-23.706,95.567,224.355)
O4': (-28.644,97.641,220.283)
C8: (-26.823,97.684,222.259)
C2: (-26.200,93.441,223.121)
C6: (-24.748,95.260,223.776)
C5: (-25.707,96.065,223.120)
C4: (-26.805,95.496,222.526)
P: (-27.675,101.845,221.198)
C4': (-29.729,98.577,220.465)
C2': (-29.999,96.812,222.044)
O2': (-31.069,96.061,221.502)
N1: (-25.089,93.932,223.736)
N2: (-26.318,92.115,223.204)
N3: (-27.105,94.178,222.485)
N7: (-25.743,97.425,222.941)
N9: (-27.527,96.558,221.993)
O5': (-28.312,100.381,221.212)
O3': (-31.604,98.656,222.016)
OP2: (-26.874,102.070,222.442)
C3': (-30.243,98.299,221.864)
C1': (-28.755,96.580,221.196)
C5': (-29.241,99.979,220.216)
O6: (-23.706,95.567,224.355)
O4': (-28.644,97.641,220.283)
C8: (-26.823,97.684,222.259)
C2: (-26.200,93.441,223.121)
C6: (-24.748,95.260,223.776)
C5: (-25.707,96.065,223.120)
C4: (-26.805,95.496,222.526)
P: (-27.675,101.845,221.198)
C4': (-29.729,98.577,220.465)
C2': (-29.999,96.812,222.044)
O2': (-31.069,96.061,221.502)
N1: (-25.089,93.932,223.736)
N2: (-26.318,92.115,223.204)
N3: (-27.105,94.178,222.485)
N7: (-25.743,97.425,222.941)
N9: (-27.527,96.558,221.993)
O5': (-28.312,100.381,221.212)
O3': (-31.604,98.656,222.016)
Image (generated by PyMOL):