Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2851:A2852
Extra
PDB:
ATOM 1 O3' G A2850 -0.988 -27.299 -42.014 1.00 22.03 O
ATOM 2 P C A2851 0.576 -26.893 -41.889 1.00 2.25 P
ATOM 3 OP1 C A2851 0.688 -25.504 -42.465 1.00 2.25 O
ATOM 4 OP2 C A2851 1.365 -28.027 -42.508 1.00 2.25 O
ATOM 5 O5' C A2851 0.841 -26.862 -40.311 1.00 2.25 O
ATOM 6 C5' C A2851 1.182 -28.061 -39.619 1.00 2.25 C
ATOM 7 C4' C A2851 1.104 -27.887 -38.124 1.00 2.25 C
ATOM 8 O4' C A2851 0.845 -26.495 -37.825 1.00 2.25 O
ATOM 9 C3' C A2851 -0.007 -28.651 -37.419 1.00 2.25 C
ATOM 10 O3' C A2851 0.380 -29.957 -37.053 1.00 2.25 O
ATOM 11 C2' C A2851 -0.344 -27.764 -36.234 1.00 2.25 C
ATOM 12 O2' C A2851 0.576 -27.970 -35.183 1.00 2.25 O
ATOM 13 C1' C A2851 -0.110 -26.374 -36.811 1.00 2.25 C
ATOM 14 N1 C A2851 -1.313 -25.798 -37.417 1.00 2.08 N
ATOM 15 C2 C A2851 -2.272 -25.212 -36.626 1.00 2.08 C
ATOM 16 O2 C A2851 -2.100 -25.232 -35.399 1.00 2.08 O
ATOM 17 N3 C A2851 -3.363 -24.654 -37.203 1.00 2.08 N
ATOM 18 C4 C A2851 -3.483 -24.658 -38.529 1.00 2.08 C
ATOM 19 N4 C A2851 -4.578 -24.100 -39.064 1.00 2.08 N
ATOM 20 C5 C A2851 -2.489 -25.253 -39.358 1.00 2.08 C
ATOM 21 C6 C A2851 -1.429 -25.792 -38.766 1.00 2.08 C
ATOM 22 P G A2852 -0.152 -31.202 -37.907 1.00 4.07 P
ATOM 23 OP1 G A2852 0.812 -32.316 -37.731 1.00 4.07 O
ATOM 24 OP2 G A2852 -0.411 -30.694 -39.291 1.00 4.07 O
ATOM 25 O5' G A2852 -1.515 -31.557 -37.169 1.00 4.07 O
TER
ATOM 1 O3' C B2851 0.380 -29.957 -37.053 1.00 2.25 O
ATOM 2 P G B2852 -0.152 -31.202 -37.907 1.00 4.07 P
ATOM 3 OP1 G B2852 0.812 -32.316 -37.731 1.00 4.07 O
ATOM 4 OP2 G B2852 -0.411 -30.694 -39.291 1.00 4.07 O
ATOM 5 O5' G B2852 -1.515 -31.557 -37.169 1.00 4.07 O
ATOM 6 C5' G B2852 -1.555 -31.692 -35.745 1.00 4.07 C
ATOM 7 C4' G B2852 -2.716 -30.922 -35.121 1.00 4.07 C
ATOM 8 O4' G B2852 -2.798 -29.584 -35.691 1.00 4.07 O
ATOM 9 C3' G B2852 -4.097 -31.504 -35.350 1.00 4.07 C
ATOM 10 O3' G B2852 -4.400 -32.558 -34.443 1.00 4.07 O
ATOM 11 C2' G B2852 -5.015 -30.287 -35.225 1.00 4.07 C
ATOM 12 O2' G B2852 -5.302 -30.018 -33.865 1.00 4.07 O
ATOM 13 C1' G B2852 -4.137 -29.157 -35.745 1.00 4.07 C
ATOM 14 N9 G B2852 -4.452 -28.749 -37.125 1.00 3.85 N
ATOM 15 C8 G B2852 -3.786 -29.054 -38.277 1.00 3.85 C
ATOM 16 N7 G B2852 -4.293 -28.488 -39.355 1.00 3.85 N
ATOM 17 C5 G B2852 -5.339 -27.731 -38.890 1.00 3.85 C
ATOM 18 C6 G B2852 -6.236 -26.871 -39.578 1.00 3.85 C
ATOM 19 O6 G B2852 -6.336 -26.584 -40.780 1.00 3.85 O
ATOM 20 N1 G B2852 -7.114 -26.285 -38.703 1.00 3.85 N
ATOM 21 C2 G B2852 -7.116 -26.519 -37.359 1.00 3.85 C
ATOM 22 N2 G B2852 -8.048 -25.860 -36.686 1.00 3.85 N
ATOM 23 N3 G B2852 -6.294 -27.294 -36.686 1.00 3.85 N
ATOM 24 C4 G B2852 -5.425 -27.868 -37.518 1.00 3.85 C
ATOM 25 P A B2853 -5.118 -33.908 -34.973 1.00 7.56 P
ATOM 26 OP1 A B2853 -4.796 -34.986 -34.014 1.00 7.56 O
ATOM 27 OP2 A B2853 -4.724 -34.094 -36.406 1.00 7.56 O
ATOM 28 O5' A B2853 -6.665 -33.541 -34.874 1.00 7.56 O
TER
ATOM 2 P C A2851 0.576 -26.893 -41.889 1.00 2.25 P
ATOM 3 OP1 C A2851 0.688 -25.504 -42.465 1.00 2.25 O
ATOM 4 OP2 C A2851 1.365 -28.027 -42.508 1.00 2.25 O
ATOM 5 O5' C A2851 0.841 -26.862 -40.311 1.00 2.25 O
ATOM 6 C5' C A2851 1.182 -28.061 -39.619 1.00 2.25 C
ATOM 7 C4' C A2851 1.104 -27.887 -38.124 1.00 2.25 C
ATOM 8 O4' C A2851 0.845 -26.495 -37.825 1.00 2.25 O
ATOM 9 C3' C A2851 -0.007 -28.651 -37.419 1.00 2.25 C
ATOM 10 O3' C A2851 0.380 -29.957 -37.053 1.00 2.25 O
ATOM 11 C2' C A2851 -0.344 -27.764 -36.234 1.00 2.25 C
ATOM 12 O2' C A2851 0.576 -27.970 -35.183 1.00 2.25 O
ATOM 13 C1' C A2851 -0.110 -26.374 -36.811 1.00 2.25 C
ATOM 14 N1 C A2851 -1.313 -25.798 -37.417 1.00 2.08 N
ATOM 15 C2 C A2851 -2.272 -25.212 -36.626 1.00 2.08 C
ATOM 16 O2 C A2851 -2.100 -25.232 -35.399 1.00 2.08 O
ATOM 17 N3 C A2851 -3.363 -24.654 -37.203 1.00 2.08 N
ATOM 18 C4 C A2851 -3.483 -24.658 -38.529 1.00 2.08 C
ATOM 19 N4 C A2851 -4.578 -24.100 -39.064 1.00 2.08 N
ATOM 20 C5 C A2851 -2.489 -25.253 -39.358 1.00 2.08 C
ATOM 21 C6 C A2851 -1.429 -25.792 -38.766 1.00 2.08 C
ATOM 22 P G A2852 -0.152 -31.202 -37.907 1.00 4.07 P
ATOM 23 OP1 G A2852 0.812 -32.316 -37.731 1.00 4.07 O
ATOM 24 OP2 G A2852 -0.411 -30.694 -39.291 1.00 4.07 O
ATOM 25 O5' G A2852 -1.515 -31.557 -37.169 1.00 4.07 O
TER
ATOM 1 O3' C B2851 0.380 -29.957 -37.053 1.00 2.25 O
ATOM 2 P G B2852 -0.152 -31.202 -37.907 1.00 4.07 P
ATOM 3 OP1 G B2852 0.812 -32.316 -37.731 1.00 4.07 O
ATOM 4 OP2 G B2852 -0.411 -30.694 -39.291 1.00 4.07 O
ATOM 5 O5' G B2852 -1.515 -31.557 -37.169 1.00 4.07 O
ATOM 6 C5' G B2852 -1.555 -31.692 -35.745 1.00 4.07 C
ATOM 7 C4' G B2852 -2.716 -30.922 -35.121 1.00 4.07 C
ATOM 8 O4' G B2852 -2.798 -29.584 -35.691 1.00 4.07 O
ATOM 9 C3' G B2852 -4.097 -31.504 -35.350 1.00 4.07 C
ATOM 10 O3' G B2852 -4.400 -32.558 -34.443 1.00 4.07 O
ATOM 11 C2' G B2852 -5.015 -30.287 -35.225 1.00 4.07 C
ATOM 12 O2' G B2852 -5.302 -30.018 -33.865 1.00 4.07 O
ATOM 13 C1' G B2852 -4.137 -29.157 -35.745 1.00 4.07 C
ATOM 14 N9 G B2852 -4.452 -28.749 -37.125 1.00 3.85 N
ATOM 15 C8 G B2852 -3.786 -29.054 -38.277 1.00 3.85 C
ATOM 16 N7 G B2852 -4.293 -28.488 -39.355 1.00 3.85 N
ATOM 17 C5 G B2852 -5.339 -27.731 -38.890 1.00 3.85 C
ATOM 18 C6 G B2852 -6.236 -26.871 -39.578 1.00 3.85 C
ATOM 19 O6 G B2852 -6.336 -26.584 -40.780 1.00 3.85 O
ATOM 20 N1 G B2852 -7.114 -26.285 -38.703 1.00 3.85 N
ATOM 21 C2 G B2852 -7.116 -26.519 -37.359 1.00 3.85 C
ATOM 22 N2 G B2852 -8.048 -25.860 -36.686 1.00 3.85 N
ATOM 23 N3 G B2852 -6.294 -27.294 -36.686 1.00 3.85 N
ATOM 24 C4 G B2852 -5.425 -27.868 -37.518 1.00 3.85 C
ATOM 25 P A B2853 -5.118 -33.908 -34.973 1.00 7.56 P
ATOM 26 OP1 A B2853 -4.796 -34.986 -34.014 1.00 7.56 O
ATOM 27 OP2 A B2853 -4.724 -34.094 -36.406 1.00 7.56 O
ATOM 28 O5' A B2853 -6.665 -33.541 -34.874 1.00 7.56 O
TER
Atoms:
C2: (-2.272,-25.212,-36.626)
OP1: (0.688,-25.504,-42.465)
OP2: (1.365,-28.027,-42.508)
C4: (-3.483,-24.658,-38.529)
O5': (0.841,-26.862,-40.311)
C3': (-0.007,-28.651,-37.419)
C1': (-0.110,-26.374,-36.811)
O4': (0.845,-26.495,-37.825)
C5': (1.182,-28.061,-39.619)
P: (0.576,-26.893,-41.889)
O2: (-2.100,-25.232,-35.399)
C4': (1.104,-27.887,-38.124)
C2': (-0.344,-27.764,-36.234)
O2': (0.576,-27.970,-35.183)
N1: (-1.313,-25.798,-37.417)
N3: (-3.363,-24.654,-37.203)
N4: (-4.578,-24.100,-39.064)
C6: (-1.429,-25.792,-38.766)
C5: (-2.489,-25.253,-39.358)
O3': (0.380,-29.957,-37.053)
OP1: (0.688,-25.504,-42.465)
OP2: (1.365,-28.027,-42.508)
C4: (-3.483,-24.658,-38.529)
O5': (0.841,-26.862,-40.311)
C3': (-0.007,-28.651,-37.419)
C1': (-0.110,-26.374,-36.811)
O4': (0.845,-26.495,-37.825)
C5': (1.182,-28.061,-39.619)
P: (0.576,-26.893,-41.889)
O2: (-2.100,-25.232,-35.399)
C4': (1.104,-27.887,-38.124)
C2': (-0.344,-27.764,-36.234)
O2': (0.576,-27.970,-35.183)
N1: (-1.313,-25.798,-37.417)
N3: (-3.363,-24.654,-37.203)
N4: (-4.578,-24.100,-39.064)
C6: (-1.429,-25.792,-38.766)
C5: (-2.489,-25.253,-39.358)
O3': (0.380,-29.957,-37.053)
OP1: (0.812,-32.316,-37.731)
OP2: (-0.411,-30.694,-39.291)
C3': (-4.097,-31.504,-35.350)
C1': (-4.137,-29.157,-35.745)
C5': (-1.555,-31.692,-35.745)
O6: (-6.336,-26.584,-40.780)
O4': (-2.798,-29.584,-35.691)
C8: (-3.786,-29.054,-38.277)
C2: (-7.116,-26.519,-37.359)
C6: (-6.236,-26.871,-39.578)
C5: (-5.339,-27.731,-38.890)
C4: (-5.425,-27.868,-37.518)
P: (-0.152,-31.202,-37.907)
C4': (-2.716,-30.922,-35.121)
C2': (-5.015,-30.287,-35.225)
O2': (-5.302,-30.018,-33.865)
N1: (-7.114,-26.285,-38.703)
N2: (-8.048,-25.860,-36.686)
N3: (-6.294,-27.294,-36.686)
N7: (-4.293,-28.488,-39.355)
N9: (-4.452,-28.749,-37.125)
O5': (-1.515,-31.557,-37.169)
O3': (-4.400,-32.558,-34.443)
OP2: (-0.411,-30.694,-39.291)
C3': (-4.097,-31.504,-35.350)
C1': (-4.137,-29.157,-35.745)
C5': (-1.555,-31.692,-35.745)
O6: (-6.336,-26.584,-40.780)
O4': (-2.798,-29.584,-35.691)
C8: (-3.786,-29.054,-38.277)
C2: (-7.116,-26.519,-37.359)
C6: (-6.236,-26.871,-39.578)
C5: (-5.339,-27.731,-38.890)
C4: (-5.425,-27.868,-37.518)
P: (-0.152,-31.202,-37.907)
C4': (-2.716,-30.922,-35.121)
C2': (-5.015,-30.287,-35.225)
O2': (-5.302,-30.018,-33.865)
N1: (-7.114,-26.285,-38.703)
N2: (-8.048,-25.860,-36.686)
N3: (-6.294,-27.294,-36.686)
N7: (-4.293,-28.488,-39.355)
N9: (-4.452,-28.749,-37.125)
O5': (-1.515,-31.557,-37.169)
O3': (-4.400,-32.558,-34.443)
Image (generated by PyMOL):