Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A38:A11
Extra
PDB:
ATOM 1 O3' G A 37 -10.799 -3.778 -51.439 1.00 24.23 O
ATOM 2 P C A 38 -10.394 -3.806 -49.888 1.00 23.36 P
ATOM 3 OP1 C A 38 -9.882 -5.167 -49.601 1.00 25.09 O
ATOM 4 OP2 C A 38 -11.541 -3.293 -49.116 1.00 23.15 O
ATOM 5 O5' C A 38 -9.202 -2.736 -49.753 1.00 21.31 O
ATOM 6 C5' C A 38 -7.854 -3.049 -50.121 1.00 18.85 C
ATOM 7 C4' C A 38 -6.890 -1.886 -49.876 1.00 18.35 C
ATOM 8 O4' C A 38 -7.214 -0.783 -50.766 1.00 17.73 O
ATOM 9 C3' C A 38 -6.872 -1.258 -48.482 1.00 17.55 C
ATOM 10 O3' C A 38 -5.962 -1.909 -47.598 1.00 17.89 O
ATOM 11 C2' C A 38 -6.342 0.148 -48.788 1.00 15.41 C
ATOM 12 O2' C A 38 -4.934 0.179 -48.901 1.00 14.77 O
ATOM 13 C1' C A 38 -6.961 0.468 -50.140 1.00 14.47 C
ATOM 14 N1 C A 38 -8.238 1.270 -50.046 1.00 13.38 N
ATOM 15 C2 C A 38 -8.204 2.677 -49.901 1.00 12.23 C
ATOM 16 O2 C A 38 -7.118 3.285 -49.857 1.00 11.75 O
ATOM 17 N3 C A 38 -9.381 3.358 -49.816 1.00 12.07 N
ATOM 18 C4 C A 38 -10.544 2.705 -49.862 1.00 13.32 C
ATOM 19 N4 C A 38 -11.667 3.425 -49.775 1.00 12.72 N
ATOM 20 C5 C A 38 -10.607 1.280 -49.996 1.00 13.26 C
ATOM 21 C6 C A 38 -9.447 0.613 -50.085 1.00 13.15 C
ATOM 22 P C A 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 23 OP1 C A 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 24 OP2 C A 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 25 O5' C A 39 -5.750 -4.330 -47.798 1.00 20.62 O
TER
ATOM 1 O3' A B 10 -0.536 2.379 -47.614 1.00 17.04 O
ATOM 2 P G B 11 -1.186 0.951 -47.982 1.00 18.25 P
ATOM 3 OP1 G B 11 -0.400 -0.080 -47.266 1.00 18.26 O
ATOM 4 OP2 G B 11 -1.341 0.816 -49.445 1.00 18.03 O
ATOM 5 O5' G B 11 -2.655 1.050 -47.358 1.00 17.80 O
ATOM 6 C5' G B 11 -2.867 1.054 -45.952 1.00 18.15 C
ATOM 7 C4' G B 11 -3.850 2.155 -45.614 1.00 18.13 C
ATOM 8 O4' G B 11 -5.144 1.842 -46.170 1.00 17.98 O
ATOM 9 C3' G B 11 -4.087 2.434 -44.134 1.00 18.41 C
ATOM 10 O3' G B 11 -3.649 3.742 -43.880 1.00 19.31 O
ATOM 11 C2' G B 11 -5.607 2.367 -43.957 1.00 17.63 C
ATOM 12 O2' G B 11 -6.097 3.435 -43.157 1.00 16.52 O
ATOM 13 C1' G B 11 -6.094 2.528 -45.390 1.00 17.37 C
ATOM 14 N9 G B 11 -7.405 1.962 -45.668 1.00 17.47 N
ATOM 15 C8 G B 11 -7.748 0.630 -45.657 1.00 18.39 C
ATOM 16 N7 G B 11 -8.995 0.408 -45.958 1.00 19.18 N
ATOM 17 C5 G B 11 -9.515 1.671 -46.183 1.00 18.29 C
ATOM 18 C6 G B 11 -10.826 2.057 -46.543 1.00 19.61 C
ATOM 19 O6 G B 11 -11.806 1.328 -46.737 1.00 19.43 O
ATOM 20 N1 G B 11 -10.944 3.439 -46.681 1.00 18.59 N
ATOM 21 C2 G B 11 -9.915 4.336 -46.489 1.00 17.77 C
ATOM 22 N2 G B 11 -10.216 5.631 -46.663 1.00 17.53 N
ATOM 23 N3 G B 11 -8.677 3.985 -46.149 1.00 17.21 N
ATOM 24 C4 G B 11 -8.547 2.643 -46.016 1.00 17.47 C
ATOM 25 P G B 12 -2.333 4.054 -43.039 1.00 19.39 P
ATOM 26 OP1 G B 12 -1.207 3.303 -43.649 1.00 20.36 O
ATOM 27 OP2 G B 12 -2.636 3.911 -41.600 1.00 19.47 O
ATOM 28 O5' G B 12 -2.204 5.622 -43.339 1.00 17.73 O
TER
ATOM 2 P C A 38 -10.394 -3.806 -49.888 1.00 23.36 P
ATOM 3 OP1 C A 38 -9.882 -5.167 -49.601 1.00 25.09 O
ATOM 4 OP2 C A 38 -11.541 -3.293 -49.116 1.00 23.15 O
ATOM 5 O5' C A 38 -9.202 -2.736 -49.753 1.00 21.31 O
ATOM 6 C5' C A 38 -7.854 -3.049 -50.121 1.00 18.85 C
ATOM 7 C4' C A 38 -6.890 -1.886 -49.876 1.00 18.35 C
ATOM 8 O4' C A 38 -7.214 -0.783 -50.766 1.00 17.73 O
ATOM 9 C3' C A 38 -6.872 -1.258 -48.482 1.00 17.55 C
ATOM 10 O3' C A 38 -5.962 -1.909 -47.598 1.00 17.89 O
ATOM 11 C2' C A 38 -6.342 0.148 -48.788 1.00 15.41 C
ATOM 12 O2' C A 38 -4.934 0.179 -48.901 1.00 14.77 O
ATOM 13 C1' C A 38 -6.961 0.468 -50.140 1.00 14.47 C
ATOM 14 N1 C A 38 -8.238 1.270 -50.046 1.00 13.38 N
ATOM 15 C2 C A 38 -8.204 2.677 -49.901 1.00 12.23 C
ATOM 16 O2 C A 38 -7.118 3.285 -49.857 1.00 11.75 O
ATOM 17 N3 C A 38 -9.381 3.358 -49.816 1.00 12.07 N
ATOM 18 C4 C A 38 -10.544 2.705 -49.862 1.00 13.32 C
ATOM 19 N4 C A 38 -11.667 3.425 -49.775 1.00 12.72 N
ATOM 20 C5 C A 38 -10.607 1.280 -49.996 1.00 13.26 C
ATOM 21 C6 C A 38 -9.447 0.613 -50.085 1.00 13.15 C
ATOM 22 P C A 39 -6.312 -3.238 -46.784 1.00 20.89 P
ATOM 23 OP1 C A 39 -7.783 -3.350 -46.645 1.00 21.47 O
ATOM 24 OP2 C A 39 -5.441 -3.304 -45.589 1.00 21.03 O
ATOM 25 O5' C A 39 -5.750 -4.330 -47.798 1.00 20.62 O
TER
ATOM 1 O3' A B 10 -0.536 2.379 -47.614 1.00 17.04 O
ATOM 2 P G B 11 -1.186 0.951 -47.982 1.00 18.25 P
ATOM 3 OP1 G B 11 -0.400 -0.080 -47.266 1.00 18.26 O
ATOM 4 OP2 G B 11 -1.341 0.816 -49.445 1.00 18.03 O
ATOM 5 O5' G B 11 -2.655 1.050 -47.358 1.00 17.80 O
ATOM 6 C5' G B 11 -2.867 1.054 -45.952 1.00 18.15 C
ATOM 7 C4' G B 11 -3.850 2.155 -45.614 1.00 18.13 C
ATOM 8 O4' G B 11 -5.144 1.842 -46.170 1.00 17.98 O
ATOM 9 C3' G B 11 -4.087 2.434 -44.134 1.00 18.41 C
ATOM 10 O3' G B 11 -3.649 3.742 -43.880 1.00 19.31 O
ATOM 11 C2' G B 11 -5.607 2.367 -43.957 1.00 17.63 C
ATOM 12 O2' G B 11 -6.097 3.435 -43.157 1.00 16.52 O
ATOM 13 C1' G B 11 -6.094 2.528 -45.390 1.00 17.37 C
ATOM 14 N9 G B 11 -7.405 1.962 -45.668 1.00 17.47 N
ATOM 15 C8 G B 11 -7.748 0.630 -45.657 1.00 18.39 C
ATOM 16 N7 G B 11 -8.995 0.408 -45.958 1.00 19.18 N
ATOM 17 C5 G B 11 -9.515 1.671 -46.183 1.00 18.29 C
ATOM 18 C6 G B 11 -10.826 2.057 -46.543 1.00 19.61 C
ATOM 19 O6 G B 11 -11.806 1.328 -46.737 1.00 19.43 O
ATOM 20 N1 G B 11 -10.944 3.439 -46.681 1.00 18.59 N
ATOM 21 C2 G B 11 -9.915 4.336 -46.489 1.00 17.77 C
ATOM 22 N2 G B 11 -10.216 5.631 -46.663 1.00 17.53 N
ATOM 23 N3 G B 11 -8.677 3.985 -46.149 1.00 17.21 N
ATOM 24 C4 G B 11 -8.547 2.643 -46.016 1.00 17.47 C
ATOM 25 P G B 12 -2.333 4.054 -43.039 1.00 19.39 P
ATOM 26 OP1 G B 12 -1.207 3.303 -43.649 1.00 20.36 O
ATOM 27 OP2 G B 12 -2.636 3.911 -41.600 1.00 19.47 O
ATOM 28 O5' G B 12 -2.204 5.622 -43.339 1.00 17.73 O
TER
Atoms:
C2: (-8.204,2.677,-49.901)
OP1: (-9.882,-5.167,-49.601)
OP2: (-11.541,-3.293,-49.116)
C4: (-10.544,2.705,-49.862)
O5': (-9.202,-2.736,-49.753)
C3': (-6.872,-1.258,-48.482)
C1': (-6.961,0.468,-50.140)
O4': (-7.214,-0.783,-50.766)
C5': (-7.854,-3.049,-50.121)
P: (-10.394,-3.806,-49.888)
O2: (-7.118,3.285,-49.857)
C4': (-6.890,-1.886,-49.876)
C2': (-6.342,0.148,-48.788)
O2': (-4.934,0.179,-48.901)
N1: (-8.238,1.270,-50.046)
N3: (-9.381,3.358,-49.816)
N4: (-11.667,3.425,-49.775)
C6: (-9.447,0.613,-50.085)
C5: (-10.607,1.280,-49.996)
O3': (-5.962,-1.909,-47.598)
OP1: (-9.882,-5.167,-49.601)
OP2: (-11.541,-3.293,-49.116)
C4: (-10.544,2.705,-49.862)
O5': (-9.202,-2.736,-49.753)
C3': (-6.872,-1.258,-48.482)
C1': (-6.961,0.468,-50.140)
O4': (-7.214,-0.783,-50.766)
C5': (-7.854,-3.049,-50.121)
P: (-10.394,-3.806,-49.888)
O2: (-7.118,3.285,-49.857)
C4': (-6.890,-1.886,-49.876)
C2': (-6.342,0.148,-48.788)
O2': (-4.934,0.179,-48.901)
N1: (-8.238,1.270,-50.046)
N3: (-9.381,3.358,-49.816)
N4: (-11.667,3.425,-49.775)
C6: (-9.447,0.613,-50.085)
C5: (-10.607,1.280,-49.996)
O3': (-5.962,-1.909,-47.598)
OP1: (-0.400,-0.080,-47.266)
OP2: (-1.341,0.816,-49.445)
C3': (-4.087,2.434,-44.134)
C1': (-6.094,2.528,-45.390)
C5': (-2.867,1.054,-45.952)
O6: (-11.806,1.328,-46.737)
O4': (-5.144,1.842,-46.170)
C8: (-7.748,0.630,-45.657)
C2: (-9.915,4.336,-46.489)
C6: (-10.826,2.057,-46.543)
C5: (-9.515,1.671,-46.183)
C4: (-8.547,2.643,-46.016)
P: (-1.186,0.951,-47.982)
C4': (-3.850,2.155,-45.614)
C2': (-5.607,2.367,-43.957)
O2': (-6.097,3.435,-43.157)
N1: (-10.944,3.439,-46.681)
N2: (-10.216,5.631,-46.663)
N3: (-8.677,3.985,-46.149)
N7: (-8.995,0.408,-45.958)
N9: (-7.405,1.962,-45.668)
O5': (-2.655,1.050,-47.358)
O3': (-3.649,3.742,-43.880)
OP2: (-1.341,0.816,-49.445)
C3': (-4.087,2.434,-44.134)
C1': (-6.094,2.528,-45.390)
C5': (-2.867,1.054,-45.952)
O6: (-11.806,1.328,-46.737)
O4': (-5.144,1.842,-46.170)
C8: (-7.748,0.630,-45.657)
C2: (-9.915,4.336,-46.489)
C6: (-10.826,2.057,-46.543)
C5: (-9.515,1.671,-46.183)
C4: (-8.547,2.643,-46.016)
P: (-1.186,0.951,-47.982)
C4': (-3.850,2.155,-45.614)
C2': (-5.607,2.367,-43.957)
O2': (-6.097,3.435,-43.157)
N1: (-10.944,3.439,-46.681)
N2: (-10.216,5.631,-46.663)
N3: (-8.677,3.985,-46.149)
N7: (-8.995,0.408,-45.958)
N9: (-7.405,1.962,-45.668)
O5': (-2.655,1.050,-47.358)
O3': (-3.649,3.742,-43.880)
Image (generated by PyMOL):