Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:169:171
Extra
PDB:
ATOM 1 O3' A A 68 58.372 -64.776 107.254 1.00 53.10 O
ATOM 2 P C A 69 59.383 -65.520 106.266 1.00 52.67 P
ATOM 3 OP1 C A 69 59.225 -64.920 104.896 1.00 52.10 O
ATOM 4 OP2 C A 69 59.171 -66.967 106.449 1.00 53.20 O
ATOM 5 O5' C A 69 60.788 -65.094 106.854 1.00 52.85 O
ATOM 6 C5' C A 69 61.815 -64.620 106.013 1.00 52.62 C
ATOM 7 C4' C A 69 63.006 -64.225 106.823 1.00 52.85 C
ATOM 8 O4' C A 69 62.698 -63.018 107.561 1.00 52.59 O
ATOM 9 C3' C A 69 63.439 -65.239 107.872 1.00 53.54 C
ATOM 10 O3' C A 69 64.345 -66.183 107.348 1.00 53.87 O
ATOM 11 C2' C A 69 64.035 -64.393 108.983 1.00 53.63 C
ATOM 12 O2' C A 69 65.415 -64.163 108.731 1.00 53.70 O
ATOM 13 C1' C A 69 63.274 -63.063 108.841 1.00 53.03 C
ATOM 14 N1 C A 69 62.187 -62.920 109.806 1.00 53.09 N
ATOM 15 C2 C A 69 61.763 -61.593 109.983 1.00 52.65 C
ATOM 16 O2 C A 69 62.387 -60.746 109.351 1.00 52.29 O
ATOM 17 N3 C A 69 60.719 -61.284 110.807 1.00 52.64 N
ATOM 18 C4 C A 69 60.122 -62.314 111.442 1.00 53.07 C
ATOM 19 N4 C A 69 59.115 -62.054 112.273 1.00 53.09 N
ATOM 20 C5 C A 69 60.531 -63.677 111.254 1.00 53.52 C
ATOM 21 C6 C A 69 61.555 -63.956 110.428 1.00 53.53 C
ATOM 22 P C A 70 64.393 -67.668 107.929 1.00 57.09 P
ATOM 23 OP1 C A 70 65.317 -68.441 107.062 1.00 57.28 O
ATOM 24 OP2 C A 70 62.994 -68.126 108.076 1.00 57.08 O
ATOM 25 O5' C A 70 65.032 -67.445 109.355 1.00 57.49 O
TER
ATOM 1 O3' C B 70 66.849 -66.637 113.055 1.00 58.55 O
ATOM 2 P G B 71 65.930 -66.878 114.340 1.00 55.57 P
ATOM 3 OP1 G B 71 66.797 -66.661 115.561 1.00 56.01 O
ATOM 4 OP2 G B 71 65.250 -68.204 114.149 1.00 55.88 O
ATOM 5 O5' G B 71 64.873 -65.702 114.245 1.00 54.95 O
ATOM 6 C5' G B 71 65.164 -64.447 114.819 1.00 54.74 C
ATOM 7 C4' G B 71 65.474 -63.453 113.757 1.00 54.13 C
ATOM 8 O4' G B 71 64.339 -63.361 112.860 1.00 53.65 O
ATOM 9 C3' G B 71 65.715 -62.033 114.232 1.00 53.85 C
ATOM 10 O3' G B 71 67.059 -61.828 114.622 1.00 54.12 O
ATOM 11 C2' G B 71 65.276 -61.216 113.024 1.00 53.14 C
ATOM 12 O2' G B 71 66.243 -61.296 111.976 1.00 53.01 O
ATOM 13 C1' G B 71 64.035 -62.022 112.606 1.00 53.09 C
ATOM 14 N9 G B 71 62.842 -61.684 113.428 1.00 53.05 N
ATOM 15 C8 G B 71 62.200 -62.510 114.307 1.00 53.49 C
ATOM 16 N7 G B 71 61.187 -61.951 114.916 1.00 53.35 N
ATOM 17 C5 G B 71 61.131 -60.672 114.409 1.00 52.78 C
ATOM 18 C6 G B 71 60.252 -59.606 114.681 1.00 52.41 C
ATOM 19 O6 G B 71 59.312 -59.551 115.457 1.00 52.50 O
ATOM 20 N1 G B 71 60.537 -58.497 113.931 1.00 51.88 N
ATOM 21 C2 G B 71 61.568 -58.428 113.031 1.00 51.73 C
ATOM 22 N2 G B 71 61.770 -57.277 112.384 1.00 51.22 N
ATOM 23 N3 G B 71 62.402 -59.404 112.756 1.00 52.06 N
ATOM 24 C4 G B 71 62.131 -60.502 113.487 1.00 52.58 C
ATOM 25 P G B 72 67.466 -60.748 115.743 1.00 60.44 P
ATOM 26 OP1 G B 72 68.935 -60.724 115.775 1.00 60.70 O
ATOM 27 OP2 G B 72 66.737 -61.072 116.969 1.00 60.82 O
ATOM 28 O5' G B 72 66.902 -59.394 115.146 1.00 59.73 O
TER
ATOM 2 P C A 69 59.383 -65.520 106.266 1.00 52.67 P
ATOM 3 OP1 C A 69 59.225 -64.920 104.896 1.00 52.10 O
ATOM 4 OP2 C A 69 59.171 -66.967 106.449 1.00 53.20 O
ATOM 5 O5' C A 69 60.788 -65.094 106.854 1.00 52.85 O
ATOM 6 C5' C A 69 61.815 -64.620 106.013 1.00 52.62 C
ATOM 7 C4' C A 69 63.006 -64.225 106.823 1.00 52.85 C
ATOM 8 O4' C A 69 62.698 -63.018 107.561 1.00 52.59 O
ATOM 9 C3' C A 69 63.439 -65.239 107.872 1.00 53.54 C
ATOM 10 O3' C A 69 64.345 -66.183 107.348 1.00 53.87 O
ATOM 11 C2' C A 69 64.035 -64.393 108.983 1.00 53.63 C
ATOM 12 O2' C A 69 65.415 -64.163 108.731 1.00 53.70 O
ATOM 13 C1' C A 69 63.274 -63.063 108.841 1.00 53.03 C
ATOM 14 N1 C A 69 62.187 -62.920 109.806 1.00 53.09 N
ATOM 15 C2 C A 69 61.763 -61.593 109.983 1.00 52.65 C
ATOM 16 O2 C A 69 62.387 -60.746 109.351 1.00 52.29 O
ATOM 17 N3 C A 69 60.719 -61.284 110.807 1.00 52.64 N
ATOM 18 C4 C A 69 60.122 -62.314 111.442 1.00 53.07 C
ATOM 19 N4 C A 69 59.115 -62.054 112.273 1.00 53.09 N
ATOM 20 C5 C A 69 60.531 -63.677 111.254 1.00 53.52 C
ATOM 21 C6 C A 69 61.555 -63.956 110.428 1.00 53.53 C
ATOM 22 P C A 70 64.393 -67.668 107.929 1.00 57.09 P
ATOM 23 OP1 C A 70 65.317 -68.441 107.062 1.00 57.28 O
ATOM 24 OP2 C A 70 62.994 -68.126 108.076 1.00 57.08 O
ATOM 25 O5' C A 70 65.032 -67.445 109.355 1.00 57.49 O
TER
ATOM 1 O3' C B 70 66.849 -66.637 113.055 1.00 58.55 O
ATOM 2 P G B 71 65.930 -66.878 114.340 1.00 55.57 P
ATOM 3 OP1 G B 71 66.797 -66.661 115.561 1.00 56.01 O
ATOM 4 OP2 G B 71 65.250 -68.204 114.149 1.00 55.88 O
ATOM 5 O5' G B 71 64.873 -65.702 114.245 1.00 54.95 O
ATOM 6 C5' G B 71 65.164 -64.447 114.819 1.00 54.74 C
ATOM 7 C4' G B 71 65.474 -63.453 113.757 1.00 54.13 C
ATOM 8 O4' G B 71 64.339 -63.361 112.860 1.00 53.65 O
ATOM 9 C3' G B 71 65.715 -62.033 114.232 1.00 53.85 C
ATOM 10 O3' G B 71 67.059 -61.828 114.622 1.00 54.12 O
ATOM 11 C2' G B 71 65.276 -61.216 113.024 1.00 53.14 C
ATOM 12 O2' G B 71 66.243 -61.296 111.976 1.00 53.01 O
ATOM 13 C1' G B 71 64.035 -62.022 112.606 1.00 53.09 C
ATOM 14 N9 G B 71 62.842 -61.684 113.428 1.00 53.05 N
ATOM 15 C8 G B 71 62.200 -62.510 114.307 1.00 53.49 C
ATOM 16 N7 G B 71 61.187 -61.951 114.916 1.00 53.35 N
ATOM 17 C5 G B 71 61.131 -60.672 114.409 1.00 52.78 C
ATOM 18 C6 G B 71 60.252 -59.606 114.681 1.00 52.41 C
ATOM 19 O6 G B 71 59.312 -59.551 115.457 1.00 52.50 O
ATOM 20 N1 G B 71 60.537 -58.497 113.931 1.00 51.88 N
ATOM 21 C2 G B 71 61.568 -58.428 113.031 1.00 51.73 C
ATOM 22 N2 G B 71 61.770 -57.277 112.384 1.00 51.22 N
ATOM 23 N3 G B 71 62.402 -59.404 112.756 1.00 52.06 N
ATOM 24 C4 G B 71 62.131 -60.502 113.487 1.00 52.58 C
ATOM 25 P G B 72 67.466 -60.748 115.743 1.00 60.44 P
ATOM 26 OP1 G B 72 68.935 -60.724 115.775 1.00 60.70 O
ATOM 27 OP2 G B 72 66.737 -61.072 116.969 1.00 60.82 O
ATOM 28 O5' G B 72 66.902 -59.394 115.146 1.00 59.73 O
TER
Atoms:
C2: (61.763,-61.593,109.983)
OP1: (59.225,-64.920,104.896)
OP2: (59.171,-66.967,106.449)
C4: (60.122,-62.314,111.442)
O5': (60.788,-65.094,106.854)
C3': (63.439,-65.239,107.872)
C1': (63.274,-63.063,108.841)
O4': (62.698,-63.018,107.561)
C5': (61.815,-64.620,106.013)
P: (59.383,-65.520,106.266)
O2: (62.387,-60.746,109.351)
C4': (63.006,-64.225,106.823)
C2': (64.035,-64.393,108.983)
O2': (65.415,-64.163,108.731)
N1: (62.187,-62.920,109.806)
N3: (60.719,-61.284,110.807)
N4: (59.115,-62.054,112.273)
C6: (61.555,-63.956,110.428)
C5: (60.531,-63.677,111.254)
O3': (64.345,-66.183,107.348)
OP1: (59.225,-64.920,104.896)
OP2: (59.171,-66.967,106.449)
C4: (60.122,-62.314,111.442)
O5': (60.788,-65.094,106.854)
C3': (63.439,-65.239,107.872)
C1': (63.274,-63.063,108.841)
O4': (62.698,-63.018,107.561)
C5': (61.815,-64.620,106.013)
P: (59.383,-65.520,106.266)
O2: (62.387,-60.746,109.351)
C4': (63.006,-64.225,106.823)
C2': (64.035,-64.393,108.983)
O2': (65.415,-64.163,108.731)
N1: (62.187,-62.920,109.806)
N3: (60.719,-61.284,110.807)
N4: (59.115,-62.054,112.273)
C6: (61.555,-63.956,110.428)
C5: (60.531,-63.677,111.254)
O3': (64.345,-66.183,107.348)
OP1: (66.797,-66.661,115.561)
OP2: (65.250,-68.204,114.149)
C3': (65.715,-62.033,114.232)
C1': (64.035,-62.022,112.606)
C5': (65.164,-64.447,114.819)
O6: (59.312,-59.551,115.457)
O4': (64.339,-63.361,112.860)
C8: (62.200,-62.510,114.307)
C2: (61.568,-58.428,113.031)
C6: (60.252,-59.606,114.681)
C5: (61.131,-60.672,114.409)
C4: (62.131,-60.502,113.487)
P: (65.930,-66.878,114.340)
C4': (65.474,-63.453,113.757)
C2': (65.276,-61.216,113.024)
O2': (66.243,-61.296,111.976)
N1: (60.537,-58.497,113.931)
N2: (61.770,-57.277,112.384)
N3: (62.402,-59.404,112.756)
N7: (61.187,-61.951,114.916)
N9: (62.842,-61.684,113.428)
O5': (64.873,-65.702,114.245)
O3': (67.059,-61.828,114.622)
OP2: (65.250,-68.204,114.149)
C3': (65.715,-62.033,114.232)
C1': (64.035,-62.022,112.606)
C5': (65.164,-64.447,114.819)
O6: (59.312,-59.551,115.457)
O4': (64.339,-63.361,112.860)
C8: (62.200,-62.510,114.307)
C2: (61.568,-58.428,113.031)
C6: (60.252,-59.606,114.681)
C5: (61.131,-60.672,114.409)
C4: (62.131,-60.502,113.487)
P: (65.930,-66.878,114.340)
C4': (65.474,-63.453,113.757)
C2': (65.276,-61.216,113.024)
O2': (66.243,-61.296,111.976)
N1: (60.537,-58.497,113.931)
N2: (61.770,-57.277,112.384)
N3: (62.402,-59.404,112.756)
N7: (61.187,-61.951,114.916)
N9: (62.842,-61.684,113.428)
O5': (64.873,-65.702,114.245)
O3': (67.059,-61.828,114.622)
Image (generated by PyMOL):