Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:C9:C10
Extra
PDB:
ATOM 1 O3' A A 8 10.122 -16.358 7.808 1.00 53.98 O
ATOM 2 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 3 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 4 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 5 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
ATOM 6 C5' C A 9 12.821 -15.738 6.538 1.00 63.79 C
ATOM 7 C4' C A 9 14.274 -15.391 6.699 1.00 55.79 C
ATOM 8 O4' C A 9 14.484 -14.807 8.012 1.00 67.19 O
ATOM 9 C3' C A 9 15.192 -16.600 6.658 1.00 47.57 C
ATOM 10 O3' C A 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 11 C2' C A 9 16.358 -16.207 7.562 1.00 51.04 C
ATOM 12 O2' C A 9 17.296 -15.383 6.881 1.00 45.11 O
ATOM 13 C1' C A 9 15.656 -15.336 8.604 1.00 59.87 C
ATOM 14 N1 C A 9 15.336 -15.977 9.919 1.00 56.10 N
ATOM 15 C2 C A 9 16.310 -15.885 10.912 1.00 54.76 C
ATOM 16 O2 C A 9 17.366 -15.321 10.634 1.00 59.28 O
ATOM 17 N3 C A 9 16.101 -16.413 12.136 1.00 52.73 N
ATOM 18 C4 C A 9 14.945 -17.019 12.410 1.00 49.71 C
ATOM 19 N4 C A 9 14.817 -17.510 13.650 1.00 41.04 N
ATOM 20 C5 C A 9 13.907 -17.132 11.424 1.00 45.30 C
ATOM 21 C6 C A 9 14.144 -16.602 10.212 1.00 48.07 C
ATOM 22 P G A 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 23 OP1 G A 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 24 OP2 G A 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 25 O5' G A 10 16.991 -18.882 5.970 1.00 41.80 O
TER
ATOM 1 O3' C B 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 2 P G B 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 3 OP1 G B 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 4 OP2 G B 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 5 O5' G B 10 16.991 -18.882 5.970 1.00 41.80 O
ATOM 6 C5' G B 10 18.290 -18.330 5.833 1.00 56.39 C
ATOM 7 C4' G B 10 19.200 -18.835 6.918 1.00 61.68 C
ATOM 8 O4' G B 10 18.761 -18.305 8.190 1.00 66.93 O
ATOM 9 C3' G B 10 19.173 -20.340 7.113 1.00 59.03 C
ATOM 10 O3' G B 10 20.029 -21.016 6.213 1.00 59.23 O
ATOM 11 C2' G B 10 19.553 -20.515 8.574 1.00 60.30 C
ATOM 12 O2' G B 10 20.954 -20.380 8.738 1.00 65.31 O
ATOM 13 C1' G B 10 18.899 -19.287 9.194 1.00 63.82 C
ATOM 14 N9 G B 10 17.576 -19.548 9.795 1.00 65.91 N
ATOM 15 C8 G B 10 16.315 -19.397 9.248 1.00 70.25 C
ATOM 16 N7 G B 10 15.357 -19.692 10.093 1.00 70.11 N
ATOM 17 C5 G B 10 16.029 -20.046 11.273 1.00 68.08 C
ATOM 18 C6 G B 10 15.554 -20.459 12.562 1.00 66.79 C
ATOM 19 O6 G B 10 14.378 -20.614 12.964 1.00 63.87 O
ATOM 20 N1 G B 10 16.621 -20.695 13.432 1.00 58.00 N
ATOM 21 C2 G B 10 17.954 -20.558 13.122 1.00 49.23 C
ATOM 22 N2 G B 10 18.855 -20.832 14.077 1.00 39.72 N
ATOM 23 N3 G B 10 18.393 -20.182 11.945 1.00 50.43 N
ATOM 24 C4 G B 10 17.392 -19.946 11.088 1.00 58.30 C
ATOM 25 P C B 11 19.767 -22.554 5.841 1.00 86.87 P
ATOM 26 OP1 C B 11 20.506 -22.721 4.568 1.00 88.29 O
ATOM 27 OP2 C B 11 18.298 -22.821 5.910 1.00 77.64 O
ATOM 28 O5' C B 11 20.539 -23.311 7.007 1.00 64.84 O
TER
ATOM 2 P C A 9 11.079 -17.590 7.401 1.00 85.04 P
ATOM 3 OP1 C A 9 10.631 -18.073 6.073 1.00 84.69 O
ATOM 4 OP2 C A 9 11.080 -18.540 8.543 1.00 84.32 O
ATOM 5 O5' C A 9 12.516 -16.906 7.291 1.00 75.65 O
ATOM 6 C5' C A 9 12.821 -15.738 6.538 1.00 63.79 C
ATOM 7 C4' C A 9 14.274 -15.391 6.699 1.00 55.79 C
ATOM 8 O4' C A 9 14.484 -14.807 8.012 1.00 67.19 O
ATOM 9 C3' C A 9 15.192 -16.600 6.658 1.00 47.57 C
ATOM 10 O3' C A 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 11 C2' C A 9 16.358 -16.207 7.562 1.00 51.04 C
ATOM 12 O2' C A 9 17.296 -15.383 6.881 1.00 45.11 O
ATOM 13 C1' C A 9 15.656 -15.336 8.604 1.00 59.87 C
ATOM 14 N1 C A 9 15.336 -15.977 9.919 1.00 56.10 N
ATOM 15 C2 C A 9 16.310 -15.885 10.912 1.00 54.76 C
ATOM 16 O2 C A 9 17.366 -15.321 10.634 1.00 59.28 O
ATOM 17 N3 C A 9 16.101 -16.413 12.136 1.00 52.73 N
ATOM 18 C4 C A 9 14.945 -17.019 12.410 1.00 49.71 C
ATOM 19 N4 C A 9 14.817 -17.510 13.650 1.00 41.04 N
ATOM 20 C5 C A 9 13.907 -17.132 11.424 1.00 45.30 C
ATOM 21 C6 C A 9 14.144 -16.602 10.212 1.00 48.07 C
ATOM 22 P G A 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 23 OP1 G A 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 24 OP2 G A 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 25 O5' G A 10 16.991 -18.882 5.970 1.00 41.80 O
TER
ATOM 1 O3' C B 9 15.555 -16.934 5.333 1.00 48.71 O
ATOM 2 P G B 10 15.902 -18.441 4.911 1.00 84.58 P
ATOM 3 OP1 G B 10 16.564 -18.308 3.584 1.00 66.15 O
ATOM 4 OP2 G B 10 14.662 -19.241 5.101 1.00 85.00 O
ATOM 5 O5' G B 10 16.991 -18.882 5.970 1.00 41.80 O
ATOM 6 C5' G B 10 18.290 -18.330 5.833 1.00 56.39 C
ATOM 7 C4' G B 10 19.200 -18.835 6.918 1.00 61.68 C
ATOM 8 O4' G B 10 18.761 -18.305 8.190 1.00 66.93 O
ATOM 9 C3' G B 10 19.173 -20.340 7.113 1.00 59.03 C
ATOM 10 O3' G B 10 20.029 -21.016 6.213 1.00 59.23 O
ATOM 11 C2' G B 10 19.553 -20.515 8.574 1.00 60.30 C
ATOM 12 O2' G B 10 20.954 -20.380 8.738 1.00 65.31 O
ATOM 13 C1' G B 10 18.899 -19.287 9.194 1.00 63.82 C
ATOM 14 N9 G B 10 17.576 -19.548 9.795 1.00 65.91 N
ATOM 15 C8 G B 10 16.315 -19.397 9.248 1.00 70.25 C
ATOM 16 N7 G B 10 15.357 -19.692 10.093 1.00 70.11 N
ATOM 17 C5 G B 10 16.029 -20.046 11.273 1.00 68.08 C
ATOM 18 C6 G B 10 15.554 -20.459 12.562 1.00 66.79 C
ATOM 19 O6 G B 10 14.378 -20.614 12.964 1.00 63.87 O
ATOM 20 N1 G B 10 16.621 -20.695 13.432 1.00 58.00 N
ATOM 21 C2 G B 10 17.954 -20.558 13.122 1.00 49.23 C
ATOM 22 N2 G B 10 18.855 -20.832 14.077 1.00 39.72 N
ATOM 23 N3 G B 10 18.393 -20.182 11.945 1.00 50.43 N
ATOM 24 C4 G B 10 17.392 -19.946 11.088 1.00 58.30 C
ATOM 25 P C B 11 19.767 -22.554 5.841 1.00 86.87 P
ATOM 26 OP1 C B 11 20.506 -22.721 4.568 1.00 88.29 O
ATOM 27 OP2 C B 11 18.298 -22.821 5.910 1.00 77.64 O
ATOM 28 O5' C B 11 20.539 -23.311 7.007 1.00 64.84 O
TER
Atoms:
C2: (16.310,-15.885,10.912)
OP1: (10.631,-18.073,6.073)
OP2: (11.080,-18.540,8.543)
C4: (14.945,-17.019,12.410)
O5': (12.516,-16.906,7.291)
C3': (15.192,-16.600,6.658)
C1': (15.656,-15.336,8.604)
O4': (14.484,-14.807,8.012)
C5': (12.821,-15.738,6.538)
P: (11.079,-17.590,7.401)
O2: (17.366,-15.321,10.634)
C4': (14.274,-15.391,6.699)
C2': (16.358,-16.207,7.562)
O2': (17.296,-15.383,6.881)
N1: (15.336,-15.977,9.919)
N3: (16.101,-16.413,12.136)
N4: (14.817,-17.510,13.650)
C6: (14.144,-16.602,10.212)
C5: (13.907,-17.132,11.424)
O3': (15.555,-16.934,5.333)
OP1: (10.631,-18.073,6.073)
OP2: (11.080,-18.540,8.543)
C4: (14.945,-17.019,12.410)
O5': (12.516,-16.906,7.291)
C3': (15.192,-16.600,6.658)
C1': (15.656,-15.336,8.604)
O4': (14.484,-14.807,8.012)
C5': (12.821,-15.738,6.538)
P: (11.079,-17.590,7.401)
O2: (17.366,-15.321,10.634)
C4': (14.274,-15.391,6.699)
C2': (16.358,-16.207,7.562)
O2': (17.296,-15.383,6.881)
N1: (15.336,-15.977,9.919)
N3: (16.101,-16.413,12.136)
N4: (14.817,-17.510,13.650)
C6: (14.144,-16.602,10.212)
C5: (13.907,-17.132,11.424)
O3': (15.555,-16.934,5.333)
OP1: (16.564,-18.308,3.584)
OP2: (14.662,-19.241,5.101)
C3': (19.173,-20.340,7.113)
C1': (18.899,-19.287,9.194)
C5': (18.290,-18.330,5.833)
O6: (14.378,-20.614,12.964)
O4': (18.761,-18.305,8.190)
C8: (16.315,-19.397,9.248)
C2: (17.954,-20.558,13.122)
C6: (15.554,-20.459,12.562)
C5: (16.029,-20.046,11.273)
C4: (17.392,-19.946,11.088)
P: (15.902,-18.441,4.911)
C4': (19.200,-18.835,6.918)
C2': (19.553,-20.515,8.574)
O2': (20.954,-20.380,8.738)
N1: (16.621,-20.695,13.432)
N2: (18.855,-20.832,14.077)
N3: (18.393,-20.182,11.945)
N7: (15.357,-19.692,10.093)
N9: (17.576,-19.548,9.795)
O5': (16.991,-18.882,5.970)
O3': (20.029,-21.016,6.213)
OP2: (14.662,-19.241,5.101)
C3': (19.173,-20.340,7.113)
C1': (18.899,-19.287,9.194)
C5': (18.290,-18.330,5.833)
O6: (14.378,-20.614,12.964)
O4': (18.761,-18.305,8.190)
C8: (16.315,-19.397,9.248)
C2: (17.954,-20.558,13.122)
C6: (15.554,-20.459,12.562)
C5: (16.029,-20.046,11.273)
C4: (17.392,-19.946,11.088)
P: (15.902,-18.441,4.911)
C4': (19.200,-18.835,6.918)
C2': (19.553,-20.515,8.574)
O2': (20.954,-20.380,8.738)
N1: (16.621,-20.695,13.432)
N2: (18.855,-20.832,14.077)
N3: (18.393,-20.182,11.945)
N7: (15.357,-19.692,10.093)
N9: (17.576,-19.548,9.795)
O5': (16.991,-18.882,5.970)
O3': (20.029,-21.016,6.213)
Image (generated by PyMOL):