Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLK:D4:D5
Extra
PDB:
ATOM 1 O3' C A 3 4.807 -4.090 -14.218 1.00 32.36 O
ATOM 2 P C A 4 5.755 -3.958 -15.509 1.00 34.96 P
ATOM 3 OP1 C A 4 4.850 -4.021 -16.680 1.00 39.65 O
ATOM 4 OP2 C A 4 6.867 -4.931 -15.412 1.00 30.83 O
ATOM 5 O5' C A 4 6.358 -2.498 -15.336 1.00 38.90 O
ATOM 6 C5' C A 4 5.553 -1.334 -15.445 1.00 37.66 C
ATOM 7 C4' C A 4 6.392 -0.085 -15.363 1.00 37.59 C
ATOM 8 O4' C A 4 6.988 0.024 -14.041 1.00 32.58 O
ATOM 9 C3' C A 4 7.586 0.005 -16.302 1.00 39.62 C
ATOM 10 O3' C A 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 11 C2' C A 4 8.434 1.072 -15.616 1.00 36.08 C
ATOM 12 O2' C A 4 7.943 2.375 -15.901 1.00 36.12 O
ATOM 13 C1' C A 4 8.182 0.775 -14.133 1.00 35.38 C
ATOM 14 N1 C A 4 9.326 0.104 -13.479 1.00 29.78 N
ATOM 15 C2 C A 4 10.431 0.892 -13.168 1.00 31.20 C
ATOM 16 O2 C A 4 10.404 2.103 -13.441 1.00 33.13 O
ATOM 17 N3 C A 4 11.502 0.323 -12.573 1.00 31.85 N
ATOM 18 C4 C A 4 11.494 -0.986 -12.292 1.00 29.01 C
ATOM 19 N4 C A 4 12.586 -1.492 -11.712 1.00 31.04 N
ATOM 20 C5 C A 4 10.383 -1.820 -12.603 1.00 20.66 C
ATOM 21 C6 C A 4 9.321 -1.238 -13.189 1.00 29.55 C
ATOM 22 P G A 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 23 OP1 G A 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 24 OP2 G A 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 25 O5' G A 5 9.441 0.167 -18.849 1.00 47.45 O
TER
ATOM 1 O3' C B 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 2 P G B 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G B 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G B 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G B 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G B 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G B 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G B 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G B 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G B 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G B 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G B 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G B 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G B 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G B 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G B 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G B 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G B 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G B 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G B 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G B 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G B 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G B 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G B 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U B 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U B 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U B 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U B 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
ATOM 2 P C A 4 5.755 -3.958 -15.509 1.00 34.96 P
ATOM 3 OP1 C A 4 4.850 -4.021 -16.680 1.00 39.65 O
ATOM 4 OP2 C A 4 6.867 -4.931 -15.412 1.00 30.83 O
ATOM 5 O5' C A 4 6.358 -2.498 -15.336 1.00 38.90 O
ATOM 6 C5' C A 4 5.553 -1.334 -15.445 1.00 37.66 C
ATOM 7 C4' C A 4 6.392 -0.085 -15.363 1.00 37.59 C
ATOM 8 O4' C A 4 6.988 0.024 -14.041 1.00 32.58 O
ATOM 9 C3' C A 4 7.586 0.005 -16.302 1.00 39.62 C
ATOM 10 O3' C A 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 11 C2' C A 4 8.434 1.072 -15.616 1.00 36.08 C
ATOM 12 O2' C A 4 7.943 2.375 -15.901 1.00 36.12 O
ATOM 13 C1' C A 4 8.182 0.775 -14.133 1.00 35.38 C
ATOM 14 N1 C A 4 9.326 0.104 -13.479 1.00 29.78 N
ATOM 15 C2 C A 4 10.431 0.892 -13.168 1.00 31.20 C
ATOM 16 O2 C A 4 10.404 2.103 -13.441 1.00 33.13 O
ATOM 17 N3 C A 4 11.502 0.323 -12.573 1.00 31.85 N
ATOM 18 C4 C A 4 11.494 -0.986 -12.292 1.00 29.01 C
ATOM 19 N4 C A 4 12.586 -1.492 -11.712 1.00 31.04 N
ATOM 20 C5 C A 4 10.383 -1.820 -12.603 1.00 20.66 C
ATOM 21 C6 C A 4 9.321 -1.238 -13.189 1.00 29.55 C
ATOM 22 P G A 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 23 OP1 G A 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 24 OP2 G A 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 25 O5' G A 5 9.441 0.167 -18.849 1.00 47.45 O
TER
ATOM 1 O3' C B 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 2 P G B 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G B 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G B 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G B 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G B 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G B 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G B 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G B 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G B 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G B 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G B 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G B 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G B 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G B 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G B 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G B 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G B 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G B 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G B 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G B 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G B 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G B 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G B 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U B 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U B 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U B 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U B 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
Atoms:
C2: (10.431,0.892,-13.168)
OP1: (4.850,-4.021,-16.680)
OP2: (6.867,-4.931,-15.412)
C4: (11.494,-0.986,-12.292)
O5': (6.358,-2.498,-15.336)
C3': (7.586,0.005,-16.302)
C1': (8.182,0.775,-14.133)
O4': (6.988,0.024,-14.041)
C5': (5.553,-1.334,-15.445)
P: (5.755,-3.958,-15.509)
O2: (10.404,2.103,-13.441)
C4': (6.392,-0.085,-15.363)
C2': (8.434,1.072,-15.616)
O2': (7.943,2.375,-15.901)
N1: (9.326,0.104,-13.479)
N3: (11.502,0.323,-12.573)
N4: (12.586,-1.492,-11.712)
C6: (9.321,-1.238,-13.189)
C5: (10.383,-1.820,-12.603)
O3': (7.236,0.320,-17.644)
OP1: (4.850,-4.021,-16.680)
OP2: (6.867,-4.931,-15.412)
C4: (11.494,-0.986,-12.292)
O5': (6.358,-2.498,-15.336)
C3': (7.586,0.005,-16.302)
C1': (8.182,0.775,-14.133)
O4': (6.988,0.024,-14.041)
C5': (5.553,-1.334,-15.445)
P: (5.755,-3.958,-15.509)
O2: (10.404,2.103,-13.441)
C4': (6.392,-0.085,-15.363)
C2': (8.434,1.072,-15.616)
O2': (7.943,2.375,-15.901)
N1: (9.326,0.104,-13.479)
N3: (11.502,0.323,-12.573)
N4: (12.586,-1.492,-11.712)
C6: (9.321,-1.238,-13.189)
C5: (10.383,-1.820,-12.603)
O3': (7.236,0.320,-17.644)
OP1: (7.283,0.230,-20.106)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
Image (generated by PyMOL):