Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1519:A1520
Extra
PDB:
ATOM 1 O3' A A1518 9.680 -45.445 13.444 1.00 0.88 O
ATOM 2 P C A1519 10.002 -46.668 12.441 1.00 0.66 P
ATOM 3 OP1 C A1519 9.697 -47.902 13.201 1.00 0.66 O
ATOM 4 OP2 C A1519 11.363 -46.494 11.902 1.00 0.66 O
ATOM 5 O5' C A1519 8.943 -46.445 11.290 1.00 0.66 O
ATOM 6 C5' C A1519 7.805 -45.647 11.549 1.00 0.66 C
ATOM 7 C4' C A1519 7.196 -45.100 10.293 1.00 0.66 C
ATOM 8 O4' C A1519 7.612 -43.735 10.089 1.00 0.66 O
ATOM 9 C3' C A1519 7.577 -45.792 9.012 1.00 0.66 C
ATOM 10 O3' C A1519 6.891 -47.010 8.831 1.00 0.66 O
ATOM 11 C2' C A1519 7.232 -44.731 7.991 1.00 0.66 C
ATOM 12 O2' C A1519 5.834 -44.646 7.817 1.00 0.66 O
ATOM 13 C1' C A1519 7.710 -43.477 8.717 1.00 0.66 C
ATOM 14 N1 C A1519 9.101 -43.212 8.413 1.00 0.60 N
ATOM 15 C2 C A1519 9.358 -42.692 7.168 1.00 0.60 C
ATOM 16 O2 C A1519 8.381 -42.445 6.454 1.00 0.60 O
ATOM 17 N3 C A1519 10.624 -42.488 6.807 1.00 0.60 N
ATOM 18 C4 C A1519 11.578 -42.799 7.667 1.00 0.60 C
ATOM 19 N4 C A1519 12.824 -42.570 7.282 1.00 0.60 N
ATOM 20 C5 C A1519 11.338 -43.353 8.948 1.00 0.60 C
ATOM 21 C6 C A1519 10.077 -43.561 9.278 1.00 0.60 C
ATOM 22 P G A1520 6.995 -47.808 7.447 1.00 6.80 P
ATOM 23 OP1 G A1520 5.736 -48.590 7.318 1.00 6.80 O
ATOM 24 OP2 G A1520 8.300 -48.544 7.444 1.00 6.80 O
ATOM 25 O5' G A1520 7.027 -46.648 6.371 1.00 6.80 O
TER
ATOM 1 O3' C B1519 6.891 -47.010 8.831 1.00 0.66 O
ATOM 2 P G B1520 6.995 -47.808 7.447 1.00 6.80 P
ATOM 3 OP1 G B1520 5.736 -48.590 7.318 1.00 6.80 O
ATOM 4 OP2 G B1520 8.300 -48.544 7.444 1.00 6.80 O
ATOM 5 O5' G B1520 7.027 -46.648 6.371 1.00 6.80 O
ATOM 6 C5' G B1520 6.670 -46.904 5.038 1.00 6.80 C
ATOM 7 C4' G B1520 7.321 -45.930 4.110 1.00 6.80 C
ATOM 8 O4' G B1520 8.090 -44.967 4.873 1.00 6.80 O
ATOM 9 C3' G B1520 8.348 -46.505 3.165 1.00 6.80 C
ATOM 10 O3' G B1520 7.775 -47.215 2.086 1.00 6.80 O
ATOM 11 C2' G B1520 9.134 -45.269 2.772 1.00 6.80 C
ATOM 12 O2' G B1520 8.372 -44.450 1.903 1.00 6.80 O
ATOM 13 C1' G B1520 9.228 -44.573 4.127 1.00 6.80 C
ATOM 14 N9 G B1520 10.427 -44.981 4.871 1.00 6.69 N
ATOM 15 C8 G B1520 10.472 -45.851 5.926 1.00 6.69 C
ATOM 16 N7 G B1520 11.672 -46.033 6.394 1.00 6.69 N
ATOM 17 C5 G B1520 12.466 -45.238 5.595 1.00 6.69 C
ATOM 18 C6 G B1520 13.858 -45.034 5.607 1.00 6.69 C
ATOM 19 O6 G B1520 14.717 -45.502 6.362 1.00 6.69 O
ATOM 20 N1 G B1520 14.229 -44.159 4.617 1.00 6.69 N
ATOM 21 C2 G B1520 13.396 -43.560 3.733 1.00 6.69 C
ATOM 22 N2 G B1520 13.964 -42.746 2.848 1.00 6.69 N
ATOM 23 N3 G B1520 12.106 -43.737 3.702 1.00 6.69 N
ATOM 24 C4 G B1520 11.711 -44.580 4.657 1.00 6.69 C
ATOM 25 P A B1521 7.345 -48.738 2.310 1.00 15.26 P
ATOM 26 OP1 A B1521 5.874 -48.769 2.322 1.00 15.26 O
ATOM 27 OP2 A B1521 8.075 -49.249 3.497 1.00 15.26 O
ATOM 28 O5' A B1521 7.879 -49.435 1.006 1.00 15.26 O
TER
ATOM 2 P C A1519 10.002 -46.668 12.441 1.00 0.66 P
ATOM 3 OP1 C A1519 9.697 -47.902 13.201 1.00 0.66 O
ATOM 4 OP2 C A1519 11.363 -46.494 11.902 1.00 0.66 O
ATOM 5 O5' C A1519 8.943 -46.445 11.290 1.00 0.66 O
ATOM 6 C5' C A1519 7.805 -45.647 11.549 1.00 0.66 C
ATOM 7 C4' C A1519 7.196 -45.100 10.293 1.00 0.66 C
ATOM 8 O4' C A1519 7.612 -43.735 10.089 1.00 0.66 O
ATOM 9 C3' C A1519 7.577 -45.792 9.012 1.00 0.66 C
ATOM 10 O3' C A1519 6.891 -47.010 8.831 1.00 0.66 O
ATOM 11 C2' C A1519 7.232 -44.731 7.991 1.00 0.66 C
ATOM 12 O2' C A1519 5.834 -44.646 7.817 1.00 0.66 O
ATOM 13 C1' C A1519 7.710 -43.477 8.717 1.00 0.66 C
ATOM 14 N1 C A1519 9.101 -43.212 8.413 1.00 0.60 N
ATOM 15 C2 C A1519 9.358 -42.692 7.168 1.00 0.60 C
ATOM 16 O2 C A1519 8.381 -42.445 6.454 1.00 0.60 O
ATOM 17 N3 C A1519 10.624 -42.488 6.807 1.00 0.60 N
ATOM 18 C4 C A1519 11.578 -42.799 7.667 1.00 0.60 C
ATOM 19 N4 C A1519 12.824 -42.570 7.282 1.00 0.60 N
ATOM 20 C5 C A1519 11.338 -43.353 8.948 1.00 0.60 C
ATOM 21 C6 C A1519 10.077 -43.561 9.278 1.00 0.60 C
ATOM 22 P G A1520 6.995 -47.808 7.447 1.00 6.80 P
ATOM 23 OP1 G A1520 5.736 -48.590 7.318 1.00 6.80 O
ATOM 24 OP2 G A1520 8.300 -48.544 7.444 1.00 6.80 O
ATOM 25 O5' G A1520 7.027 -46.648 6.371 1.00 6.80 O
TER
ATOM 1 O3' C B1519 6.891 -47.010 8.831 1.00 0.66 O
ATOM 2 P G B1520 6.995 -47.808 7.447 1.00 6.80 P
ATOM 3 OP1 G B1520 5.736 -48.590 7.318 1.00 6.80 O
ATOM 4 OP2 G B1520 8.300 -48.544 7.444 1.00 6.80 O
ATOM 5 O5' G B1520 7.027 -46.648 6.371 1.00 6.80 O
ATOM 6 C5' G B1520 6.670 -46.904 5.038 1.00 6.80 C
ATOM 7 C4' G B1520 7.321 -45.930 4.110 1.00 6.80 C
ATOM 8 O4' G B1520 8.090 -44.967 4.873 1.00 6.80 O
ATOM 9 C3' G B1520 8.348 -46.505 3.165 1.00 6.80 C
ATOM 10 O3' G B1520 7.775 -47.215 2.086 1.00 6.80 O
ATOM 11 C2' G B1520 9.134 -45.269 2.772 1.00 6.80 C
ATOM 12 O2' G B1520 8.372 -44.450 1.903 1.00 6.80 O
ATOM 13 C1' G B1520 9.228 -44.573 4.127 1.00 6.80 C
ATOM 14 N9 G B1520 10.427 -44.981 4.871 1.00 6.69 N
ATOM 15 C8 G B1520 10.472 -45.851 5.926 1.00 6.69 C
ATOM 16 N7 G B1520 11.672 -46.033 6.394 1.00 6.69 N
ATOM 17 C5 G B1520 12.466 -45.238 5.595 1.00 6.69 C
ATOM 18 C6 G B1520 13.858 -45.034 5.607 1.00 6.69 C
ATOM 19 O6 G B1520 14.717 -45.502 6.362 1.00 6.69 O
ATOM 20 N1 G B1520 14.229 -44.159 4.617 1.00 6.69 N
ATOM 21 C2 G B1520 13.396 -43.560 3.733 1.00 6.69 C
ATOM 22 N2 G B1520 13.964 -42.746 2.848 1.00 6.69 N
ATOM 23 N3 G B1520 12.106 -43.737 3.702 1.00 6.69 N
ATOM 24 C4 G B1520 11.711 -44.580 4.657 1.00 6.69 C
ATOM 25 P A B1521 7.345 -48.738 2.310 1.00 15.26 P
ATOM 26 OP1 A B1521 5.874 -48.769 2.322 1.00 15.26 O
ATOM 27 OP2 A B1521 8.075 -49.249 3.497 1.00 15.26 O
ATOM 28 O5' A B1521 7.879 -49.435 1.006 1.00 15.26 O
TER
Atoms:
C2: (9.358,-42.692,7.168)
OP1: (9.697,-47.902,13.201)
OP2: (11.363,-46.494,11.902)
C4: (11.578,-42.799,7.667)
O5': (8.943,-46.445,11.290)
C3': (7.577,-45.792,9.012)
C1': (7.710,-43.477,8.717)
O4': (7.612,-43.735,10.089)
C5': (7.805,-45.647,11.549)
P: (10.002,-46.668,12.441)
O2: (8.381,-42.445,6.454)
C4': (7.196,-45.100,10.293)
C2': (7.232,-44.731,7.991)
O2': (5.834,-44.646,7.817)
N1: (9.101,-43.212,8.413)
N3: (10.624,-42.488,6.807)
N4: (12.824,-42.570,7.282)
C6: (10.077,-43.561,9.278)
C5: (11.338,-43.353,8.948)
O3': (6.891,-47.010,8.831)
OP1: (9.697,-47.902,13.201)
OP2: (11.363,-46.494,11.902)
C4: (11.578,-42.799,7.667)
O5': (8.943,-46.445,11.290)
C3': (7.577,-45.792,9.012)
C1': (7.710,-43.477,8.717)
O4': (7.612,-43.735,10.089)
C5': (7.805,-45.647,11.549)
P: (10.002,-46.668,12.441)
O2: (8.381,-42.445,6.454)
C4': (7.196,-45.100,10.293)
C2': (7.232,-44.731,7.991)
O2': (5.834,-44.646,7.817)
N1: (9.101,-43.212,8.413)
N3: (10.624,-42.488,6.807)
N4: (12.824,-42.570,7.282)
C6: (10.077,-43.561,9.278)
C5: (11.338,-43.353,8.948)
O3': (6.891,-47.010,8.831)
OP1: (5.736,-48.590,7.318)
OP2: (8.300,-48.544,7.444)
C3': (8.348,-46.505,3.165)
C1': (9.228,-44.573,4.127)
C5': (6.670,-46.904,5.038)
O6: (14.717,-45.502,6.362)
O4': (8.090,-44.967,4.873)
C8: (10.472,-45.851,5.926)
C2: (13.396,-43.560,3.733)
C6: (13.858,-45.034,5.607)
C5: (12.466,-45.238,5.595)
C4: (11.711,-44.580,4.657)
P: (6.995,-47.808,7.447)
C4': (7.321,-45.930,4.110)
C2': (9.134,-45.269,2.772)
O2': (8.372,-44.450,1.903)
N1: (14.229,-44.159,4.617)
N2: (13.964,-42.746,2.848)
N3: (12.106,-43.737,3.702)
N7: (11.672,-46.033,6.394)
N9: (10.427,-44.981,4.871)
O5': (7.027,-46.648,6.371)
O3': (7.775,-47.215,2.086)
OP2: (8.300,-48.544,7.444)
C3': (8.348,-46.505,3.165)
C1': (9.228,-44.573,4.127)
C5': (6.670,-46.904,5.038)
O6: (14.717,-45.502,6.362)
O4': (8.090,-44.967,4.873)
C8: (10.472,-45.851,5.926)
C2: (13.396,-43.560,3.733)
C6: (13.858,-45.034,5.607)
C5: (12.466,-45.238,5.595)
C4: (11.711,-44.580,4.657)
P: (6.995,-47.808,7.447)
C4': (7.321,-45.930,4.110)
C2': (9.134,-45.269,2.772)
O2': (8.372,-44.450,1.903)
N1: (14.229,-44.159,4.617)
N2: (13.964,-42.746,2.848)
N3: (12.106,-43.737,3.702)
N7: (11.672,-46.033,6.394)
N9: (10.427,-44.981,4.871)
O5': (7.027,-46.648,6.371)
O3': (7.775,-47.215,2.086)
Image (generated by PyMOL):