Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2499:A2500
Extra
PDB:
ATOM 1 O3' U A2498 90.257 -23.289 -10.826 1.00 44.64 O
ATOM 2 P C A2499 90.349 -22.707 -12.323 1.00 54.72 P
ATOM 3 OP1 C A2499 91.587 -21.876 -12.401 1.00 52.75 O
ATOM 4 OP2 C A2499 89.033 -22.080 -12.648 1.00 58.45 O
ATOM 5 O5' C A2499 90.522 -24.018 -13.227 1.00 39.77 O
ATOM 6 C5' C A2499 91.753 -24.746 -13.233 1.00 44.82 C
ATOM 7 C4' C A2499 91.695 -25.896 -14.209 1.00 41.88 C
ATOM 8 O4' C A2499 90.708 -26.871 -13.778 1.00 42.20 O
ATOM 9 C3' C A2499 91.256 -25.531 -15.614 1.00 42.21 C
ATOM 10 O3' C A2499 92.301 -25.032 -16.411 1.00 37.24 O
ATOM 11 C2' C A2499 90.716 -26.843 -16.155 1.00 41.36 C
ATOM 12 O2' C A2499 91.763 -27.670 -16.606 1.00 44.80 O
ATOM 13 C1' C A2499 90.055 -27.434 -14.911 1.00 41.29 C
ATOM 14 N1 C A2499 88.615 -27.092 -14.840 1.00 42.00 N
ATOM 15 C2 C A2499 87.682 -27.969 -15.362 1.00 44.72 C
ATOM 16 O2 C A2499 88.065 -29.022 -15.834 1.00 46.06 O
ATOM 17 N3 C A2499 86.378 -27.649 -15.335 1.00 46.43 N
ATOM 18 C4 C A2499 85.990 -26.498 -14.795 1.00 45.86 C
ATOM 19 N4 C A2499 84.689 -26.213 -14.793 1.00 43.27 N
ATOM 20 C5 C A2499 86.916 -25.585 -14.236 1.00 50.14 C
ATOM 21 C6 C A2499 88.207 -25.918 -14.278 1.00 47.92 C
ATOM 22 P G A2500 91.937 -24.099 -17.662 1.00 46.33 P
ATOM 23 OP1 G A2500 93.216 -23.661 -18.293 1.00 39.51 O
ATOM 24 OP2 G A2500 90.973 -23.083 -17.168 1.00 50.86 O
ATOM 25 O5' G A2500 91.149 -25.063 -18.663 1.00 41.31 O
TER
ATOM 1 O3' C B2499 92.301 -25.032 -16.411 1.00 37.24 O
ATOM 2 P G B2500 91.937 -24.099 -17.662 1.00 46.33 P
ATOM 3 OP1 G B2500 93.216 -23.661 -18.293 1.00 39.51 O
ATOM 4 OP2 G B2500 90.973 -23.083 -17.168 1.00 50.86 O
ATOM 5 O5' G B2500 91.149 -25.063 -18.663 1.00 41.31 O
ATOM 6 C5' G B2500 91.775 -26.219 -19.227 1.00 47.50 C
ATOM 7 C4' G B2500 90.788 -27.014 -20.073 1.00 46.77 C
ATOM 8 O4' G B2500 89.860 -27.734 -19.214 1.00 46.10 O
ATOM 9 C3' G B2500 89.892 -26.230 -21.023 1.00 42.19 C
ATOM 10 O3' G B2500 90.482 -25.890 -22.264 1.00 39.40 O
ATOM 11 C2' G B2500 88.721 -27.176 -21.212 1.00 42.77 C
ATOM 12 O2' G B2500 89.072 -28.184 -22.137 1.00 34.71 O
ATOM 13 C1' G B2500 88.561 -27.741 -19.798 1.00 45.48 C
ATOM 14 N9 G B2500 87.735 -26.837 -19.006 1.00 45.53 N
ATOM 15 C8 G B2500 88.199 -25.860 -18.150 1.00 52.24 C
ATOM 16 N7 G B2500 87.253 -25.114 -17.654 1.00 48.89 N
ATOM 17 C5 G B2500 86.094 -25.634 -18.194 1.00 46.79 C
ATOM 18 C6 G B2500 84.778 -25.220 -18.035 1.00 46.13 C
ATOM 19 O6 G B2500 84.367 -24.237 -17.414 1.00 46.28 O
ATOM 20 N1 G B2500 83.893 -26.054 -18.702 1.00 41.68 N
ATOM 21 C2 G B2500 84.249 -27.144 -19.452 1.00 41.34 C
ATOM 22 N2 G B2500 83.238 -27.857 -19.957 1.00 38.29 N
ATOM 23 N3 G B2500 85.501 -27.514 -19.667 1.00 41.85 N
ATOM 24 C4 G B2500 86.365 -26.724 -19.003 1.00 43.14 C
ATOM 25 P U B2501 90.319 -24.385 -22.812 1.00 44.14 P
ATOM 26 OP1 U B2501 91.087 -24.231 -24.086 1.00 40.25 O
ATOM 27 OP2 U B2501 90.628 -23.499 -21.635 1.00 35.95 O
ATOM 28 O5' U B2501 88.763 -24.236 -23.168 1.00 41.65 O
TER
ATOM 2 P C A2499 90.349 -22.707 -12.323 1.00 54.72 P
ATOM 3 OP1 C A2499 91.587 -21.876 -12.401 1.00 52.75 O
ATOM 4 OP2 C A2499 89.033 -22.080 -12.648 1.00 58.45 O
ATOM 5 O5' C A2499 90.522 -24.018 -13.227 1.00 39.77 O
ATOM 6 C5' C A2499 91.753 -24.746 -13.233 1.00 44.82 C
ATOM 7 C4' C A2499 91.695 -25.896 -14.209 1.00 41.88 C
ATOM 8 O4' C A2499 90.708 -26.871 -13.778 1.00 42.20 O
ATOM 9 C3' C A2499 91.256 -25.531 -15.614 1.00 42.21 C
ATOM 10 O3' C A2499 92.301 -25.032 -16.411 1.00 37.24 O
ATOM 11 C2' C A2499 90.716 -26.843 -16.155 1.00 41.36 C
ATOM 12 O2' C A2499 91.763 -27.670 -16.606 1.00 44.80 O
ATOM 13 C1' C A2499 90.055 -27.434 -14.911 1.00 41.29 C
ATOM 14 N1 C A2499 88.615 -27.092 -14.840 1.00 42.00 N
ATOM 15 C2 C A2499 87.682 -27.969 -15.362 1.00 44.72 C
ATOM 16 O2 C A2499 88.065 -29.022 -15.834 1.00 46.06 O
ATOM 17 N3 C A2499 86.378 -27.649 -15.335 1.00 46.43 N
ATOM 18 C4 C A2499 85.990 -26.498 -14.795 1.00 45.86 C
ATOM 19 N4 C A2499 84.689 -26.213 -14.793 1.00 43.27 N
ATOM 20 C5 C A2499 86.916 -25.585 -14.236 1.00 50.14 C
ATOM 21 C6 C A2499 88.207 -25.918 -14.278 1.00 47.92 C
ATOM 22 P G A2500 91.937 -24.099 -17.662 1.00 46.33 P
ATOM 23 OP1 G A2500 93.216 -23.661 -18.293 1.00 39.51 O
ATOM 24 OP2 G A2500 90.973 -23.083 -17.168 1.00 50.86 O
ATOM 25 O5' G A2500 91.149 -25.063 -18.663 1.00 41.31 O
TER
ATOM 1 O3' C B2499 92.301 -25.032 -16.411 1.00 37.24 O
ATOM 2 P G B2500 91.937 -24.099 -17.662 1.00 46.33 P
ATOM 3 OP1 G B2500 93.216 -23.661 -18.293 1.00 39.51 O
ATOM 4 OP2 G B2500 90.973 -23.083 -17.168 1.00 50.86 O
ATOM 5 O5' G B2500 91.149 -25.063 -18.663 1.00 41.31 O
ATOM 6 C5' G B2500 91.775 -26.219 -19.227 1.00 47.50 C
ATOM 7 C4' G B2500 90.788 -27.014 -20.073 1.00 46.77 C
ATOM 8 O4' G B2500 89.860 -27.734 -19.214 1.00 46.10 O
ATOM 9 C3' G B2500 89.892 -26.230 -21.023 1.00 42.19 C
ATOM 10 O3' G B2500 90.482 -25.890 -22.264 1.00 39.40 O
ATOM 11 C2' G B2500 88.721 -27.176 -21.212 1.00 42.77 C
ATOM 12 O2' G B2500 89.072 -28.184 -22.137 1.00 34.71 O
ATOM 13 C1' G B2500 88.561 -27.741 -19.798 1.00 45.48 C
ATOM 14 N9 G B2500 87.735 -26.837 -19.006 1.00 45.53 N
ATOM 15 C8 G B2500 88.199 -25.860 -18.150 1.00 52.24 C
ATOM 16 N7 G B2500 87.253 -25.114 -17.654 1.00 48.89 N
ATOM 17 C5 G B2500 86.094 -25.634 -18.194 1.00 46.79 C
ATOM 18 C6 G B2500 84.778 -25.220 -18.035 1.00 46.13 C
ATOM 19 O6 G B2500 84.367 -24.237 -17.414 1.00 46.28 O
ATOM 20 N1 G B2500 83.893 -26.054 -18.702 1.00 41.68 N
ATOM 21 C2 G B2500 84.249 -27.144 -19.452 1.00 41.34 C
ATOM 22 N2 G B2500 83.238 -27.857 -19.957 1.00 38.29 N
ATOM 23 N3 G B2500 85.501 -27.514 -19.667 1.00 41.85 N
ATOM 24 C4 G B2500 86.365 -26.724 -19.003 1.00 43.14 C
ATOM 25 P U B2501 90.319 -24.385 -22.812 1.00 44.14 P
ATOM 26 OP1 U B2501 91.087 -24.231 -24.086 1.00 40.25 O
ATOM 27 OP2 U B2501 90.628 -23.499 -21.635 1.00 35.95 O
ATOM 28 O5' U B2501 88.763 -24.236 -23.168 1.00 41.65 O
TER
Atoms:
C2: (87.682,-27.969,-15.362)
OP1: (91.587,-21.876,-12.401)
OP2: (89.033,-22.080,-12.648)
C4: (85.990,-26.498,-14.795)
O5': (90.522,-24.018,-13.227)
C3': (91.256,-25.531,-15.614)
C1': (90.055,-27.434,-14.911)
O4': (90.708,-26.871,-13.778)
C5': (91.753,-24.746,-13.233)
P: (90.349,-22.707,-12.323)
O2: (88.065,-29.022,-15.834)
C4': (91.695,-25.896,-14.209)
C2': (90.716,-26.843,-16.155)
O2': (91.763,-27.670,-16.606)
N1: (88.615,-27.092,-14.840)
N3: (86.378,-27.649,-15.335)
N4: (84.689,-26.213,-14.793)
C6: (88.207,-25.918,-14.278)
C5: (86.916,-25.585,-14.236)
O3': (92.301,-25.032,-16.411)
OP1: (91.587,-21.876,-12.401)
OP2: (89.033,-22.080,-12.648)
C4: (85.990,-26.498,-14.795)
O5': (90.522,-24.018,-13.227)
C3': (91.256,-25.531,-15.614)
C1': (90.055,-27.434,-14.911)
O4': (90.708,-26.871,-13.778)
C5': (91.753,-24.746,-13.233)
P: (90.349,-22.707,-12.323)
O2: (88.065,-29.022,-15.834)
C4': (91.695,-25.896,-14.209)
C2': (90.716,-26.843,-16.155)
O2': (91.763,-27.670,-16.606)
N1: (88.615,-27.092,-14.840)
N3: (86.378,-27.649,-15.335)
N4: (84.689,-26.213,-14.793)
C6: (88.207,-25.918,-14.278)
C5: (86.916,-25.585,-14.236)
O3': (92.301,-25.032,-16.411)
OP1: (93.216,-23.661,-18.293)
OP2: (90.973,-23.083,-17.168)
C3': (89.892,-26.230,-21.023)
C1': (88.561,-27.741,-19.798)
C5': (91.775,-26.219,-19.227)
O6: (84.367,-24.237,-17.414)
O4': (89.860,-27.734,-19.214)
C8: (88.199,-25.860,-18.150)
C2: (84.249,-27.144,-19.452)
C6: (84.778,-25.220,-18.035)
C5: (86.094,-25.634,-18.194)
C4: (86.365,-26.724,-19.003)
P: (91.937,-24.099,-17.662)
C4': (90.788,-27.014,-20.073)
C2': (88.721,-27.176,-21.212)
O2': (89.072,-28.184,-22.137)
N1: (83.893,-26.054,-18.702)
N2: (83.238,-27.857,-19.957)
N3: (85.501,-27.514,-19.667)
N7: (87.253,-25.114,-17.654)
N9: (87.735,-26.837,-19.006)
O5': (91.149,-25.063,-18.663)
O3': (90.482,-25.890,-22.264)
OP2: (90.973,-23.083,-17.168)
C3': (89.892,-26.230,-21.023)
C1': (88.561,-27.741,-19.798)
C5': (91.775,-26.219,-19.227)
O6: (84.367,-24.237,-17.414)
O4': (89.860,-27.734,-19.214)
C8: (88.199,-25.860,-18.150)
C2: (84.249,-27.144,-19.452)
C6: (84.778,-25.220,-18.035)
C5: (86.094,-25.634,-18.194)
C4: (86.365,-26.724,-19.003)
P: (91.937,-24.099,-17.662)
C4': (90.788,-27.014,-20.073)
C2': (88.721,-27.176,-21.212)
O2': (89.072,-28.184,-22.137)
N1: (83.893,-26.054,-18.702)
N2: (83.238,-27.857,-19.957)
N3: (85.501,-27.514,-19.667)
N7: (87.253,-25.114,-17.654)
N9: (87.735,-26.837,-19.006)
O5': (91.149,-25.063,-18.663)
O3': (90.482,-25.890,-22.264)
Image (generated by PyMOL):