Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11957:11958
Extra
PDB:
ATOM 1 O3' A A1956 -7.139 8.356 106.552 1.00 41.38 O
ATOM 2 P G A1957 -7.697 6.938 107.074 1.00 44.11 P
ATOM 3 OP1 G A1957 -8.361 7.164 108.365 1.00 44.58 O
ATOM 4 OP2 G A1957 -6.612 5.976 107.022 1.00 43.75 O
ATOM 5 O5' G A1957 -8.779 6.566 105.972 1.00 44.03 O
ATOM 6 C5' G A1957 -9.773 7.499 105.547 1.00 44.27 C
ATOM 7 C4' G A1957 -10.425 7.033 104.265 1.00 44.08 C
ATOM 8 O4' G A1957 -9.562 7.310 103.132 1.00 43.69 O
ATOM 9 C3' G A1957 -10.682 5.544 104.147 1.00 43.92 C
ATOM 10 O3' G A1957 -11.806 5.140 104.859 1.00 44.27 O
ATOM 11 C2' G A1957 -10.833 5.383 102.656 1.00 43.63 C
ATOM 12 O2' G A1957 -12.079 5.901 102.228 1.00 43.88 O
ATOM 13 C1' G A1957 -9.718 6.298 102.155 1.00 43.39 C
ATOM 14 N9 G A1957 -8.450 5.541 102.038 1.00 43.01 N
ATOM 15 C8 G A1957 -7.572 5.304 103.061 1.00 43.00 C
ATOM 16 N7 G A1957 -6.578 4.523 102.733 1.00 42.64 N
ATOM 17 C5 G A1957 -6.834 4.179 101.427 1.00 42.39 C
ATOM 18 C6 G A1957 -6.084 3.334 100.566 1.00 41.98 C
ATOM 19 O6 G A1957 -5.015 2.710 100.753 1.00 41.74 O
ATOM 20 N1 G A1957 -6.707 3.265 99.321 1.00 41.87 N
ATOM 21 C2 G A1957 -7.860 3.902 98.944 1.00 42.11 C
ATOM 22 N2 G A1957 -8.222 3.684 97.667 1.00 41.94 N
ATOM 23 N3 G A1957 -8.537 4.695 99.767 1.00 42.49 N
ATOM 24 C4 G A1957 -7.981 4.793 100.980 1.00 42.61 C
ATOM 25 P C A1958 -12.031 3.602 105.254 1.00 47.89 P
ATOM 26 OP1 C A1958 -13.439 3.498 105.731 1.00 48.31 O
ATOM 27 OP2 C A1958 -10.933 3.191 106.177 1.00 47.81 O
ATOM 28 O5' C A1958 -11.882 2.836 103.867 1.00 47.49 O
TER
ATOM 1 O3' G B1957 -11.806 5.140 104.859 1.00 44.27 O
ATOM 2 P C B1958 -12.031 3.602 105.254 1.00 47.89 P
ATOM 3 OP1 C B1958 -13.439 3.498 105.731 1.00 48.31 O
ATOM 4 OP2 C B1958 -10.933 3.191 106.177 1.00 47.81 O
ATOM 5 O5' C B1958 -11.882 2.836 103.867 1.00 47.49 O
ATOM 6 C5' C B1958 -12.970 2.797 102.957 1.00 47.54 C
ATOM 7 C4' C B1958 -12.765 1.767 101.906 1.00 47.19 C
ATOM 8 O4' C B1958 -11.582 2.074 101.125 1.00 46.80 O
ATOM 9 C3' C B1958 -12.507 0.393 102.420 1.00 47.10 C
ATOM 10 O3' C B1958 -13.673 -0.223 102.844 1.00 47.40 O
ATOM 11 C2' C B1958 -11.819 -0.274 101.232 1.00 46.66 C
ATOM 12 O2' C B1958 -12.750 -0.590 100.208 1.00 46.65 O
ATOM 13 C1' C B1958 -10.930 0.879 100.756 1.00 46.47 C
ATOM 14 N1 C B1958 -9.617 0.850 101.439 1.00 46.31 N
ATOM 15 C2 C B1958 -8.683 -0.020 100.974 1.00 45.94 C
ATOM 16 O2 C B1958 -9.042 -0.647 99.972 1.00 45.78 O
ATOM 17 N3 C B1958 -7.472 -0.130 101.577 1.00 45.80 N
ATOM 18 C4 C B1958 -7.203 0.624 102.610 1.00 46.01 C
ATOM 19 N4 C B1958 -6.042 0.513 103.197 1.00 45.89 N
ATOM 20 C5 C B1958 -8.139 1.521 103.121 1.00 46.39 C
ATOM 21 C6 C B1958 -9.330 1.594 102.529 1.00 46.53 C
ATOM 22 P A B1959 -13.623 -1.420 103.884 1.00 44.79 P
ATOM 23 OP1 A B1959 -15.032 -1.925 104.014 1.00 45.10 O
ATOM 24 OP2 A B1959 -12.920 -0.957 105.083 1.00 44.91 O
ATOM 25 O5' A B1959 -12.735 -2.480 103.118 1.00 44.35 O
TER
ATOM 2 P G A1957 -7.697 6.938 107.074 1.00 44.11 P
ATOM 3 OP1 G A1957 -8.361 7.164 108.365 1.00 44.58 O
ATOM 4 OP2 G A1957 -6.612 5.976 107.022 1.00 43.75 O
ATOM 5 O5' G A1957 -8.779 6.566 105.972 1.00 44.03 O
ATOM 6 C5' G A1957 -9.773 7.499 105.547 1.00 44.27 C
ATOM 7 C4' G A1957 -10.425 7.033 104.265 1.00 44.08 C
ATOM 8 O4' G A1957 -9.562 7.310 103.132 1.00 43.69 O
ATOM 9 C3' G A1957 -10.682 5.544 104.147 1.00 43.92 C
ATOM 10 O3' G A1957 -11.806 5.140 104.859 1.00 44.27 O
ATOM 11 C2' G A1957 -10.833 5.383 102.656 1.00 43.63 C
ATOM 12 O2' G A1957 -12.079 5.901 102.228 1.00 43.88 O
ATOM 13 C1' G A1957 -9.718 6.298 102.155 1.00 43.39 C
ATOM 14 N9 G A1957 -8.450 5.541 102.038 1.00 43.01 N
ATOM 15 C8 G A1957 -7.572 5.304 103.061 1.00 43.00 C
ATOM 16 N7 G A1957 -6.578 4.523 102.733 1.00 42.64 N
ATOM 17 C5 G A1957 -6.834 4.179 101.427 1.00 42.39 C
ATOM 18 C6 G A1957 -6.084 3.334 100.566 1.00 41.98 C
ATOM 19 O6 G A1957 -5.015 2.710 100.753 1.00 41.74 O
ATOM 20 N1 G A1957 -6.707 3.265 99.321 1.00 41.87 N
ATOM 21 C2 G A1957 -7.860 3.902 98.944 1.00 42.11 C
ATOM 22 N2 G A1957 -8.222 3.684 97.667 1.00 41.94 N
ATOM 23 N3 G A1957 -8.537 4.695 99.767 1.00 42.49 N
ATOM 24 C4 G A1957 -7.981 4.793 100.980 1.00 42.61 C
ATOM 25 P C A1958 -12.031 3.602 105.254 1.00 47.89 P
ATOM 26 OP1 C A1958 -13.439 3.498 105.731 1.00 48.31 O
ATOM 27 OP2 C A1958 -10.933 3.191 106.177 1.00 47.81 O
ATOM 28 O5' C A1958 -11.882 2.836 103.867 1.00 47.49 O
TER
ATOM 1 O3' G B1957 -11.806 5.140 104.859 1.00 44.27 O
ATOM 2 P C B1958 -12.031 3.602 105.254 1.00 47.89 P
ATOM 3 OP1 C B1958 -13.439 3.498 105.731 1.00 48.31 O
ATOM 4 OP2 C B1958 -10.933 3.191 106.177 1.00 47.81 O
ATOM 5 O5' C B1958 -11.882 2.836 103.867 1.00 47.49 O
ATOM 6 C5' C B1958 -12.970 2.797 102.957 1.00 47.54 C
ATOM 7 C4' C B1958 -12.765 1.767 101.906 1.00 47.19 C
ATOM 8 O4' C B1958 -11.582 2.074 101.125 1.00 46.80 O
ATOM 9 C3' C B1958 -12.507 0.393 102.420 1.00 47.10 C
ATOM 10 O3' C B1958 -13.673 -0.223 102.844 1.00 47.40 O
ATOM 11 C2' C B1958 -11.819 -0.274 101.232 1.00 46.66 C
ATOM 12 O2' C B1958 -12.750 -0.590 100.208 1.00 46.65 O
ATOM 13 C1' C B1958 -10.930 0.879 100.756 1.00 46.47 C
ATOM 14 N1 C B1958 -9.617 0.850 101.439 1.00 46.31 N
ATOM 15 C2 C B1958 -8.683 -0.020 100.974 1.00 45.94 C
ATOM 16 O2 C B1958 -9.042 -0.647 99.972 1.00 45.78 O
ATOM 17 N3 C B1958 -7.472 -0.130 101.577 1.00 45.80 N
ATOM 18 C4 C B1958 -7.203 0.624 102.610 1.00 46.01 C
ATOM 19 N4 C B1958 -6.042 0.513 103.197 1.00 45.89 N
ATOM 20 C5 C B1958 -8.139 1.521 103.121 1.00 46.39 C
ATOM 21 C6 C B1958 -9.330 1.594 102.529 1.00 46.53 C
ATOM 22 P A B1959 -13.623 -1.420 103.884 1.00 44.79 P
ATOM 23 OP1 A B1959 -15.032 -1.925 104.014 1.00 45.10 O
ATOM 24 OP2 A B1959 -12.920 -0.957 105.083 1.00 44.91 O
ATOM 25 O5' A B1959 -12.735 -2.480 103.118 1.00 44.35 O
TER
Atoms:
OP1: (-8.361,7.164,108.365)
OP2: (-6.612,5.976,107.022)
C3': (-10.682,5.544,104.147)
C1': (-9.718,6.298,102.155)
C5': (-9.773,7.499,105.547)
O6: (-5.015,2.710,100.753)
O4': (-9.562,7.310,103.132)
C8: (-7.572,5.304,103.061)
C2: (-7.860,3.902,98.944)
C6: (-6.084,3.334,100.566)
C5: (-6.834,4.179,101.427)
C4: (-7.981,4.793,100.980)
P: (-7.697,6.938,107.074)
C4': (-10.425,7.033,104.265)
C2': (-10.833,5.383,102.656)
O2': (-12.079,5.901,102.228)
N1: (-6.707,3.265,99.321)
N2: (-8.222,3.684,97.667)
N3: (-8.537,4.695,99.767)
N7: (-6.578,4.523,102.733)
N9: (-8.450,5.541,102.038)
O5': (-8.779,6.566,105.972)
O3': (-11.806,5.140,104.859)
OP2: (-6.612,5.976,107.022)
C3': (-10.682,5.544,104.147)
C1': (-9.718,6.298,102.155)
C5': (-9.773,7.499,105.547)
O6: (-5.015,2.710,100.753)
O4': (-9.562,7.310,103.132)
C8: (-7.572,5.304,103.061)
C2: (-7.860,3.902,98.944)
C6: (-6.084,3.334,100.566)
C5: (-6.834,4.179,101.427)
C4: (-7.981,4.793,100.980)
P: (-7.697,6.938,107.074)
C4': (-10.425,7.033,104.265)
C2': (-10.833,5.383,102.656)
O2': (-12.079,5.901,102.228)
N1: (-6.707,3.265,99.321)
N2: (-8.222,3.684,97.667)
N3: (-8.537,4.695,99.767)
N7: (-6.578,4.523,102.733)
N9: (-8.450,5.541,102.038)
O5': (-8.779,6.566,105.972)
O3': (-11.806,5.140,104.859)
C2: (-8.683,-0.020,100.974)
OP1: (-13.439,3.498,105.731)
OP2: (-10.933,3.191,106.177)
C4: (-7.203,0.624,102.610)
O5': (-11.882,2.836,103.867)
C3': (-12.507,0.393,102.420)
C1': (-10.930,0.879,100.756)
O4': (-11.582,2.074,101.125)
C5': (-12.970,2.797,102.957)
P: (-12.031,3.602,105.254)
O2: (-9.042,-0.647,99.972)
C4': (-12.765,1.767,101.906)
C2': (-11.819,-0.274,101.232)
O2': (-12.750,-0.590,100.208)
N1: (-9.617,0.850,101.439)
N3: (-7.472,-0.130,101.577)
N4: (-6.042,0.513,103.197)
C6: (-9.330,1.594,102.529)
C5: (-8.139,1.521,103.121)
O3': (-13.673,-0.223,102.844)
OP1: (-13.439,3.498,105.731)
OP2: (-10.933,3.191,106.177)
C4: (-7.203,0.624,102.610)
O5': (-11.882,2.836,103.867)
C3': (-12.507,0.393,102.420)
C1': (-10.930,0.879,100.756)
O4': (-11.582,2.074,101.125)
C5': (-12.970,2.797,102.957)
P: (-12.031,3.602,105.254)
O2: (-9.042,-0.647,99.972)
C4': (-12.765,1.767,101.906)
C2': (-11.819,-0.274,101.232)
O2': (-12.750,-0.590,100.208)
N1: (-9.617,0.850,101.439)
N3: (-7.472,-0.130,101.577)
N4: (-6.042,0.513,103.197)
C6: (-9.330,1.594,102.529)
C5: (-8.139,1.521,103.121)
O3': (-13.673,-0.223,102.844)
Image (generated by PyMOL):