ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A1216:A1217

Extra

PDB:
ATOM 1 O3' C A1215 9.698 100.462 116.881 1.00 43.49 O
ATOM 2 P C A1216 9.882 100.471 115.279 1.00 43.24 P
ATOM 3 OP1 C A1216 8.683 101.123 114.694 1.00 42.72 O
ATOM 4 OP2 C A1216 10.275 99.116 114.834 1.00 43.61 O
ATOM 5 O5' C A1216 11.150 101.399 115.039 1.00 44.39 O
ATOM 6 C5' C A1216 11.213 102.746 115.541 1.00 43.82 C
ATOM 7 C4' C A1216 12.649 103.236 115.521 1.00 43.89 C
ATOM 8 O4' C A1216 13.470 102.409 116.392 1.00 44.01 O
ATOM 9 C3' C A1216 13.381 103.169 114.183 1.00 43.37 C
ATOM 10 O3' C A1216 13.054 104.276 113.340 1.00 42.31 O
ATOM 11 C2' C A1216 14.839 103.209 114.624 1.00 43.54 C
ATOM 12 O2' C A1216 15.228 104.501 115.035 1.00 45.03 O
ATOM 13 C1' C A1216 14.797 102.358 115.890 1.00 43.12 C
ATOM 14 N1 C A1216 15.208 100.951 115.733 1.00 41.73 N
ATOM 15 C2 C A1216 16.551 100.648 115.411 1.00 40.96 C
ATOM 16 O2 C A1216 17.353 101.566 115.194 1.00 39.92 O
ATOM 17 N3 C A1216 16.928 99.354 115.341 1.00 41.14 N
ATOM 18 C4 C A1216 16.037 98.384 115.565 1.00 41.25 C
ATOM 19 N4 C A1216 16.465 97.127 115.521 1.00 41.06 N
ATOM 20 C5 C A1216 14.671 98.663 115.852 1.00 41.66 C
ATOM 21 C6 C A1216 14.305 99.944 115.924 1.00 41.24 C
ATOM 22 P G A1217 13.065 104.101 111.746 1.00 40.54 P
ATOM 23 OP1 G A1217 12.989 105.455 111.149 1.00 40.42 O
ATOM 24 OP2 G A1217 12.059 103.074 111.390 1.00 40.77 O
ATOM 25 O5' G A1217 14.535 103.599 111.448 1.00 38.89 O
TER

ATOM 1 O3' C B1216 13.054 104.276 113.340 1.00 42.31 O
ATOM 2 P G B1217 13.065 104.101 111.746 1.00 40.54 P
ATOM 3 OP1 G B1217 12.989 105.455 111.149 1.00 40.42 O
ATOM 4 OP2 G B1217 12.059 103.074 111.390 1.00 40.77 O
ATOM 5 O5' G B1217 14.535 103.599 111.448 1.00 38.89 O
ATOM 6 C5' G B1217 15.629 104.518 111.515 1.00 38.41 C
ATOM 7 C4' G B1217 16.920 103.778 111.333 1.00 38.89 C
ATOM 8 O4' G B1217 16.978 102.700 112.302 1.00 39.85 O
ATOM 9 C3' G B1217 16.988 103.089 109.992 1.00 38.31 C
ATOM 10 O3' G B1217 17.460 104.004 109.029 1.00 36.45 O
ATOM 11 C2' G B1217 17.901 101.900 110.250 1.00 40.49 C
ATOM 12 O2' G B1217 19.264 102.262 110.150 1.00 41.48 O
ATOM 13 C1' G B1217 17.522 101.534 111.697 1.00 40.46 C
ATOM 14 N9 G B1217 16.568 100.438 111.888 1.00 40.80 N
ATOM 15 C8 G B1217 15.193 100.544 111.971 1.00 41.78 C
ATOM 16 N7 G B1217 14.600 99.398 112.164 1.00 42.55 N
ATOM 17 C5 G B1217 15.640 98.478 112.209 1.00 41.20 C
ATOM 18 C6 G B1217 15.610 97.076 112.393 1.00 41.57 C
ATOM 19 O6 G B1217 14.630 96.340 112.550 1.00 42.75 O
ATOM 20 N1 G B1217 16.888 96.537 112.385 1.00 40.61 N
ATOM 21 C2 G B1217 18.046 97.250 112.224 1.00 39.81 C
ATOM 22 N2 G B1217 19.187 96.541 112.284 1.00 40.55 N
ATOM 23 N3 G B1217 18.089 98.556 112.031 1.00 39.79 N
ATOM 24 C4 G B1217 16.860 99.103 112.039 1.00 40.21 C
ATOM 25 P A B1218 16.823 103.991 107.569 1.00 37.34 P
ATOM 26 OP1 A B1218 17.015 105.303 106.916 1.00 38.83 O
ATOM 27 OP2 A B1218 15.475 103.391 107.622 1.00 37.92 O
ATOM 28 O5' A B1218 17.736 102.951 106.814 1.00 37.09 O
TER

Atoms:
C2: (16.551,100.648,115.411)
OP1: (8.683,101.123,114.694)
OP2: (10.275,99.116,114.834)
C4: (16.037,98.384,115.565)
O5': (11.150,101.399,115.039)
C3': (13.381,103.169,114.183)
C1': (14.797,102.358,115.890)
O4': (13.470,102.409,116.392)
C5': (11.213,102.746,115.541)
P: (9.882,100.471,115.279)
O2: (17.353,101.566,115.194)
C4': (12.649,103.236,115.521)
C2': (14.839,103.209,114.624)
O2': (15.228,104.501,115.035)
N1: (15.208,100.951,115.733)
N3: (16.928,99.354,115.341)
N4: (16.465,97.127,115.521)
C6: (14.305,99.944,115.924)
C5: (14.671,98.663,115.852)
O3': (13.054,104.276,113.340)
OP1: (12.989,105.455,111.149)
OP2: (12.059,103.074,111.390)
C3': (16.988,103.089,109.992)
C1': (17.522,101.534,111.697)
C5': (15.629,104.518,111.515)
O6: (14.630,96.340,112.550)
O4': (16.978,102.700,112.302)
C8: (15.193,100.544,111.971)
C2: (18.046,97.250,112.224)
C6: (15.610,97.076,112.393)
C5: (15.640,98.478,112.209)
C4: (16.860,99.103,112.039)
P: (13.065,104.101,111.746)
C4': (16.920,103.778,111.333)
C2': (17.901,101.900,110.250)
O2': (19.264,102.262,110.150)
N1: (16.888,96.537,112.385)
N2: (19.187,96.541,112.284)
N3: (18.089,98.556,112.031)
N7: (14.600,99.398,112.164)
N9: (16.568,100.438,111.888)
O5': (14.535,103.599,111.448)
O3': (17.460,104.004,109.029)
Image (generated by PyMOL):
PyMOL image
show in jmol