Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2440:A2411
Extra
PDB:
ATOM 1 O3' U A2439 66.293 -51.130 -2.549 1.00 32.97 O
ATOM 2 P C A2440 66.635 -51.686 -1.086 1.00 26.51 P
ATOM 3 OP1 C A2440 65.495 -52.515 -0.658 1.00 28.02 O
ATOM 4 OP2 C A2440 67.011 -50.537 -0.241 1.00 27.38 O
ATOM 5 O5' C A2440 67.893 -52.589 -1.352 1.00 33.73 O
ATOM 6 C5' C A2440 67.737 -53.920 -1.783 1.00 32.98 C
ATOM 7 C4' C A2440 68.430 -54.868 -0.860 1.00 24.07 C
ATOM 8 O4' C A2440 69.817 -54.521 -0.856 1.00 19.49 O
ATOM 9 C3' C A2440 67.964 -54.817 0.596 1.00 35.82 C
ATOM 10 O3' C A2440 67.279 -56.030 1.010 1.00 48.15 O
ATOM 11 C2' C A2440 69.240 -54.625 1.424 1.00 28.87 C
ATOM 12 O2' C A2440 69.402 -55.581 2.460 1.00 32.74 O
ATOM 13 C1' C A2440 70.370 -54.735 0.406 1.00 27.84 C
ATOM 14 N1 C A2440 71.439 -53.735 0.619 1.00 36.18 N
ATOM 15 C2 C A2440 72.807 -54.058 0.676 1.00 31.56 C
ATOM 16 O2 C A2440 73.180 -55.234 0.501 1.00 31.45 O
ATOM 17 N3 C A2440 73.675 -53.065 0.919 1.00 20.67 N
ATOM 18 C4 C A2440 73.250 -51.827 1.114 1.00 25.94 C
ATOM 19 N4 C A2440 74.146 -50.871 1.344 1.00 29.57 N
ATOM 20 C5 C A2440 71.876 -51.488 1.072 1.00 35.39 C
ATOM 21 C6 C A2440 71.012 -52.471 0.830 1.00 33.09 C
ATOM 22 P U A2441 67.438 -57.446 0.244 1.00 21.81 P
ATOM 23 OP1 U A2441 67.716 -58.467 1.279 1.00 37.27 O
ATOM 24 OP2 U A2441 68.390 -57.278 -0.835 1.00 37.49 O
ATOM 25 O5' U A2441 66.005 -57.669 -0.371 1.00 42.04 O
TER
ATOM 1 O3' U B2410 69.373 -50.069 8.101 1.00 38.52 O
ATOM 2 P G B2411 68.803 -49.335 6.799 1.00 26.85 P
ATOM 3 OP1 G B2411 67.954 -48.220 7.272 1.00 27.34 O
ATOM 4 OP2 G B2411 68.205 -50.370 5.919 1.00 36.05 O
ATOM 5 O5' G B2411 70.114 -48.759 6.142 1.00 31.09 O
ATOM 6 C5' G B2411 70.874 -47.789 6.825 1.00 29.11 C
ATOM 7 C4' G B2411 72.203 -47.601 6.190 1.00 25.32 C
ATOM 8 O4' G B2411 72.927 -48.863 6.242 1.00 32.84 O
ATOM 9 C3' G B2411 72.151 -47.190 4.724 1.00 22.14 C
ATOM 10 O3' G B2411 73.068 -46.155 4.488 1.00 29.41 O
ATOM 11 C2' G B2411 72.617 -48.440 3.980 1.00 29.13 C
ATOM 12 O2' G B2411 73.299 -48.182 2.774 1.00 27.75 O
ATOM 13 C1' G B2411 73.533 -49.083 4.996 1.00 31.80 C
ATOM 14 N9 G B2411 73.730 -50.511 4.770 1.00 33.40 N
ATOM 15 C8 G B2411 74.960 -51.096 4.641 1.00 36.06 C
ATOM 16 N7 G B2411 74.898 -52.356 4.352 1.00 40.11 N
ATOM 17 C5 G B2411 73.543 -52.614 4.252 1.00 33.07 C
ATOM 18 C6 G B2411 72.892 -53.828 3.949 1.00 32.80 C
ATOM 19 O6 G B2411 73.354 -54.962 3.709 1.00 36.00 O
ATOM 20 N1 G B2411 71.532 -53.649 3.951 1.00 29.55 N
ATOM 21 C2 G B2411 70.872 -52.491 4.199 1.00 33.10 C
ATOM 22 N2 G B2411 69.533 -52.608 4.133 1.00 36.19 N
ATOM 23 N3 G B2411 71.477 -51.343 4.483 1.00 36.00 N
ATOM 24 C4 G B2411 72.808 -51.482 4.486 1.00 33.38 C
ATOM 25 P G B2412 72.554 -44.665 4.288 1.00 42.08 P
ATOM 26 OP1 G B2412 71.107 -44.733 3.948 1.00 29.61 O
ATOM 27 OP2 G B2412 73.496 -44.008 3.315 1.00 44.20 O
ATOM 28 O5' G B2412 72.752 -44.059 5.762 1.00 37.27 O
TER
ATOM 2 P C A2440 66.635 -51.686 -1.086 1.00 26.51 P
ATOM 3 OP1 C A2440 65.495 -52.515 -0.658 1.00 28.02 O
ATOM 4 OP2 C A2440 67.011 -50.537 -0.241 1.00 27.38 O
ATOM 5 O5' C A2440 67.893 -52.589 -1.352 1.00 33.73 O
ATOM 6 C5' C A2440 67.737 -53.920 -1.783 1.00 32.98 C
ATOM 7 C4' C A2440 68.430 -54.868 -0.860 1.00 24.07 C
ATOM 8 O4' C A2440 69.817 -54.521 -0.856 1.00 19.49 O
ATOM 9 C3' C A2440 67.964 -54.817 0.596 1.00 35.82 C
ATOM 10 O3' C A2440 67.279 -56.030 1.010 1.00 48.15 O
ATOM 11 C2' C A2440 69.240 -54.625 1.424 1.00 28.87 C
ATOM 12 O2' C A2440 69.402 -55.581 2.460 1.00 32.74 O
ATOM 13 C1' C A2440 70.370 -54.735 0.406 1.00 27.84 C
ATOM 14 N1 C A2440 71.439 -53.735 0.619 1.00 36.18 N
ATOM 15 C2 C A2440 72.807 -54.058 0.676 1.00 31.56 C
ATOM 16 O2 C A2440 73.180 -55.234 0.501 1.00 31.45 O
ATOM 17 N3 C A2440 73.675 -53.065 0.919 1.00 20.67 N
ATOM 18 C4 C A2440 73.250 -51.827 1.114 1.00 25.94 C
ATOM 19 N4 C A2440 74.146 -50.871 1.344 1.00 29.57 N
ATOM 20 C5 C A2440 71.876 -51.488 1.072 1.00 35.39 C
ATOM 21 C6 C A2440 71.012 -52.471 0.830 1.00 33.09 C
ATOM 22 P U A2441 67.438 -57.446 0.244 1.00 21.81 P
ATOM 23 OP1 U A2441 67.716 -58.467 1.279 1.00 37.27 O
ATOM 24 OP2 U A2441 68.390 -57.278 -0.835 1.00 37.49 O
ATOM 25 O5' U A2441 66.005 -57.669 -0.371 1.00 42.04 O
TER
ATOM 1 O3' U B2410 69.373 -50.069 8.101 1.00 38.52 O
ATOM 2 P G B2411 68.803 -49.335 6.799 1.00 26.85 P
ATOM 3 OP1 G B2411 67.954 -48.220 7.272 1.00 27.34 O
ATOM 4 OP2 G B2411 68.205 -50.370 5.919 1.00 36.05 O
ATOM 5 O5' G B2411 70.114 -48.759 6.142 1.00 31.09 O
ATOM 6 C5' G B2411 70.874 -47.789 6.825 1.00 29.11 C
ATOM 7 C4' G B2411 72.203 -47.601 6.190 1.00 25.32 C
ATOM 8 O4' G B2411 72.927 -48.863 6.242 1.00 32.84 O
ATOM 9 C3' G B2411 72.151 -47.190 4.724 1.00 22.14 C
ATOM 10 O3' G B2411 73.068 -46.155 4.488 1.00 29.41 O
ATOM 11 C2' G B2411 72.617 -48.440 3.980 1.00 29.13 C
ATOM 12 O2' G B2411 73.299 -48.182 2.774 1.00 27.75 O
ATOM 13 C1' G B2411 73.533 -49.083 4.996 1.00 31.80 C
ATOM 14 N9 G B2411 73.730 -50.511 4.770 1.00 33.40 N
ATOM 15 C8 G B2411 74.960 -51.096 4.641 1.00 36.06 C
ATOM 16 N7 G B2411 74.898 -52.356 4.352 1.00 40.11 N
ATOM 17 C5 G B2411 73.543 -52.614 4.252 1.00 33.07 C
ATOM 18 C6 G B2411 72.892 -53.828 3.949 1.00 32.80 C
ATOM 19 O6 G B2411 73.354 -54.962 3.709 1.00 36.00 O
ATOM 20 N1 G B2411 71.532 -53.649 3.951 1.00 29.55 N
ATOM 21 C2 G B2411 70.872 -52.491 4.199 1.00 33.10 C
ATOM 22 N2 G B2411 69.533 -52.608 4.133 1.00 36.19 N
ATOM 23 N3 G B2411 71.477 -51.343 4.483 1.00 36.00 N
ATOM 24 C4 G B2411 72.808 -51.482 4.486 1.00 33.38 C
ATOM 25 P G B2412 72.554 -44.665 4.288 1.00 42.08 P
ATOM 26 OP1 G B2412 71.107 -44.733 3.948 1.00 29.61 O
ATOM 27 OP2 G B2412 73.496 -44.008 3.315 1.00 44.20 O
ATOM 28 O5' G B2412 72.752 -44.059 5.762 1.00 37.27 O
TER
Atoms:
C2: (72.807,-54.058,0.676)
OP1: (65.495,-52.515,-0.658)
OP2: (67.011,-50.537,-0.241)
C4: (73.250,-51.827,1.114)
O5': (67.893,-52.589,-1.352)
C3': (67.964,-54.817,0.596)
C1': (70.370,-54.735,0.406)
O4': (69.817,-54.521,-0.856)
C5': (67.737,-53.920,-1.783)
P: (66.635,-51.686,-1.086)
O2: (73.180,-55.234,0.501)
C4': (68.430,-54.868,-0.860)
C2': (69.240,-54.625,1.424)
O2': (69.402,-55.581,2.460)
N1: (71.439,-53.735,0.619)
N3: (73.675,-53.065,0.919)
N4: (74.146,-50.871,1.344)
C6: (71.012,-52.471,0.830)
C5: (71.876,-51.488,1.072)
O3': (67.279,-56.030,1.010)
OP1: (65.495,-52.515,-0.658)
OP2: (67.011,-50.537,-0.241)
C4: (73.250,-51.827,1.114)
O5': (67.893,-52.589,-1.352)
C3': (67.964,-54.817,0.596)
C1': (70.370,-54.735,0.406)
O4': (69.817,-54.521,-0.856)
C5': (67.737,-53.920,-1.783)
P: (66.635,-51.686,-1.086)
O2: (73.180,-55.234,0.501)
C4': (68.430,-54.868,-0.860)
C2': (69.240,-54.625,1.424)
O2': (69.402,-55.581,2.460)
N1: (71.439,-53.735,0.619)
N3: (73.675,-53.065,0.919)
N4: (74.146,-50.871,1.344)
C6: (71.012,-52.471,0.830)
C5: (71.876,-51.488,1.072)
O3': (67.279,-56.030,1.010)
OP1: (67.954,-48.220,7.272)
OP2: (68.205,-50.370,5.919)
C3': (72.151,-47.190,4.724)
C1': (73.533,-49.083,4.996)
C5': (70.874,-47.789,6.825)
O6: (73.354,-54.962,3.709)
O4': (72.927,-48.863,6.242)
C8: (74.960,-51.096,4.641)
C2: (70.872,-52.491,4.199)
C6: (72.892,-53.828,3.949)
C5: (73.543,-52.614,4.252)
C4: (72.808,-51.482,4.486)
P: (68.803,-49.335,6.799)
C4': (72.203,-47.601,6.190)
C2': (72.617,-48.440,3.980)
O2': (73.299,-48.182,2.774)
N1: (71.532,-53.649,3.951)
N2: (69.533,-52.608,4.133)
N3: (71.477,-51.343,4.483)
N7: (74.898,-52.356,4.352)
N9: (73.730,-50.511,4.770)
O5': (70.114,-48.759,6.142)
O3': (73.068,-46.155,4.488)
OP2: (68.205,-50.370,5.919)
C3': (72.151,-47.190,4.724)
C1': (73.533,-49.083,4.996)
C5': (70.874,-47.789,6.825)
O6: (73.354,-54.962,3.709)
O4': (72.927,-48.863,6.242)
C8: (74.960,-51.096,4.641)
C2: (70.872,-52.491,4.199)
C6: (72.892,-53.828,3.949)
C5: (73.543,-52.614,4.252)
C4: (72.808,-51.482,4.486)
P: (68.803,-49.335,6.799)
C4': (72.203,-47.601,6.190)
C2': (72.617,-48.440,3.980)
O2': (73.299,-48.182,2.774)
N1: (71.532,-53.649,3.951)
N2: (69.533,-52.608,4.133)
N3: (71.477,-51.343,4.483)
N7: (74.898,-52.356,4.352)
N9: (73.730,-50.511,4.770)
O5': (70.114,-48.759,6.142)
O3': (73.068,-46.155,4.488)
Image (generated by PyMOL):