Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CMA:0559:0560
Extra
PDB:
ATOM 1 O3' C A 558 -4.536 97.661 121.591 1.00 61.25 O
ATOM 2 P C A 559 -4.888 96.774 122.882 1.00 63.12 P
ATOM 3 OP1 C A 559 -4.301 97.462 124.060 1.00 62.84 O
ATOM 4 OP2 C A 559 -4.533 95.353 122.599 1.00 60.45 O
ATOM 5 O5' C A 559 -6.472 96.880 122.988 1.00 64.72 O
ATOM 6 C5' C A 559 -7.125 98.153 123.167 1.00 67.35 C
ATOM 7 C4' C A 559 -8.617 97.987 123.011 1.00 69.37 C
ATOM 8 O4' C A 559 -8.917 97.571 121.650 1.00 70.02 O
ATOM 9 C3' C A 559 -9.206 96.879 123.863 1.00 70.55 C
ATOM 10 O3' C A 559 -9.441 97.297 125.197 1.00 72.25 O
ATOM 11 C2' C A 559 -10.469 96.512 123.099 1.00 69.99 C
ATOM 12 O2' C A 559 -11.516 97.438 123.297 1.00 70.69 O
ATOM 13 C1' C A 559 -9.976 96.625 121.658 1.00 68.43 C
ATOM 14 N1 C A 559 -9.475 95.353 121.101 1.00 67.06 N
ATOM 15 C2 C A 559 -10.383 94.480 120.487 1.00 68.11 C
ATOM 16 O2 C A 559 -11.590 94.781 120.468 1.00 70.67 O
ATOM 17 N3 C A 559 -9.928 93.326 119.935 1.00 66.96 N
ATOM 18 C4 C A 559 -8.629 93.027 119.993 1.00 65.03 C
ATOM 19 N4 C A 559 -8.221 91.888 119.423 1.00 62.71 N
ATOM 20 C5 C A 559 -7.687 93.886 120.633 1.00 65.78 C
ATOM 21 C6 C A 559 -8.148 95.027 121.168 1.00 66.00 C
ATOM 22 P G A 560 -9.264 96.242 126.390 1.00 72.97 P
ATOM 23 OP1 G A 560 -9.633 96.937 127.650 1.00 72.14 O
ATOM 24 OP2 G A 560 -7.923 95.624 126.264 1.00 73.59 O
ATOM 25 O5' G A 560 -10.356 95.130 126.057 1.00 73.54 O
TER
ATOM 1 O3' C B 559 -9.441 97.297 125.197 1.00 72.25 O
ATOM 2 P G B 560 -9.264 96.242 126.390 1.00 72.97 P
ATOM 3 OP1 G B 560 -9.633 96.937 127.650 1.00 72.14 O
ATOM 4 OP2 G B 560 -7.923 95.624 126.264 1.00 73.59 O
ATOM 5 O5' G B 560 -10.356 95.130 126.057 1.00 73.54 O
ATOM 6 C5' G B 560 -11.763 95.445 126.123 1.00 76.13 C
ATOM 7 C4' G B 560 -12.596 94.272 125.662 1.00 76.65 C
ATOM 8 O4' G B 560 -12.346 94.028 124.254 1.00 76.01 O
ATOM 9 C3' G B 560 -12.294 92.935 126.317 1.00 78.05 C
ATOM 10 O3' G B 560 -12.881 92.790 127.606 1.00 80.22 O
ATOM 11 C2' G B 560 -12.847 91.955 125.293 1.00 76.61 C
ATOM 12 O2' G B 560 -14.255 91.842 125.341 1.00 76.33 O
ATOM 13 C1' G B 560 -12.425 92.636 123.990 1.00 74.79 C
ATOM 14 N9 G B 560 -11.110 92.180 123.554 1.00 72.20 N
ATOM 15 C8 G B 560 -9.903 92.817 123.730 1.00 71.25 C
ATOM 16 N7 G B 560 -8.894 92.139 123.257 1.00 70.74 N
ATOM 17 C5 G B 560 -9.469 90.989 122.728 1.00 70.11 C
ATOM 18 C6 G B 560 -8.875 89.874 122.081 1.00 69.24 C
ATOM 19 O6 G B 560 -7.684 89.672 121.828 1.00 69.27 O
ATOM 20 N1 G B 560 -9.825 88.930 121.716 1.00 67.99 N
ATOM 21 C2 G B 560 -11.170 89.038 121.941 1.00 68.05 C
ATOM 22 N2 G B 560 -11.918 88.009 121.530 1.00 68.11 N
ATOM 23 N3 G B 560 -11.739 90.074 122.531 1.00 68.86 N
ATOM 24 C4 G B 560 -10.835 91.003 122.899 1.00 70.46 C
ATOM 25 P A B 561 -12.172 91.839 128.694 1.00 81.57 P
ATOM 26 OP1 A B 561 -12.922 91.990 129.968 1.00 81.98 O
ATOM 27 OP2 A B 561 -10.709 92.100 128.672 1.00 81.07 O
ATOM 28 O5' A B 561 -12.410 90.369 128.128 1.00 79.62 O
TER
ATOM 2 P C A 559 -4.888 96.774 122.882 1.00 63.12 P
ATOM 3 OP1 C A 559 -4.301 97.462 124.060 1.00 62.84 O
ATOM 4 OP2 C A 559 -4.533 95.353 122.599 1.00 60.45 O
ATOM 5 O5' C A 559 -6.472 96.880 122.988 1.00 64.72 O
ATOM 6 C5' C A 559 -7.125 98.153 123.167 1.00 67.35 C
ATOM 7 C4' C A 559 -8.617 97.987 123.011 1.00 69.37 C
ATOM 8 O4' C A 559 -8.917 97.571 121.650 1.00 70.02 O
ATOM 9 C3' C A 559 -9.206 96.879 123.863 1.00 70.55 C
ATOM 10 O3' C A 559 -9.441 97.297 125.197 1.00 72.25 O
ATOM 11 C2' C A 559 -10.469 96.512 123.099 1.00 69.99 C
ATOM 12 O2' C A 559 -11.516 97.438 123.297 1.00 70.69 O
ATOM 13 C1' C A 559 -9.976 96.625 121.658 1.00 68.43 C
ATOM 14 N1 C A 559 -9.475 95.353 121.101 1.00 67.06 N
ATOM 15 C2 C A 559 -10.383 94.480 120.487 1.00 68.11 C
ATOM 16 O2 C A 559 -11.590 94.781 120.468 1.00 70.67 O
ATOM 17 N3 C A 559 -9.928 93.326 119.935 1.00 66.96 N
ATOM 18 C4 C A 559 -8.629 93.027 119.993 1.00 65.03 C
ATOM 19 N4 C A 559 -8.221 91.888 119.423 1.00 62.71 N
ATOM 20 C5 C A 559 -7.687 93.886 120.633 1.00 65.78 C
ATOM 21 C6 C A 559 -8.148 95.027 121.168 1.00 66.00 C
ATOM 22 P G A 560 -9.264 96.242 126.390 1.00 72.97 P
ATOM 23 OP1 G A 560 -9.633 96.937 127.650 1.00 72.14 O
ATOM 24 OP2 G A 560 -7.923 95.624 126.264 1.00 73.59 O
ATOM 25 O5' G A 560 -10.356 95.130 126.057 1.00 73.54 O
TER
ATOM 1 O3' C B 559 -9.441 97.297 125.197 1.00 72.25 O
ATOM 2 P G B 560 -9.264 96.242 126.390 1.00 72.97 P
ATOM 3 OP1 G B 560 -9.633 96.937 127.650 1.00 72.14 O
ATOM 4 OP2 G B 560 -7.923 95.624 126.264 1.00 73.59 O
ATOM 5 O5' G B 560 -10.356 95.130 126.057 1.00 73.54 O
ATOM 6 C5' G B 560 -11.763 95.445 126.123 1.00 76.13 C
ATOM 7 C4' G B 560 -12.596 94.272 125.662 1.00 76.65 C
ATOM 8 O4' G B 560 -12.346 94.028 124.254 1.00 76.01 O
ATOM 9 C3' G B 560 -12.294 92.935 126.317 1.00 78.05 C
ATOM 10 O3' G B 560 -12.881 92.790 127.606 1.00 80.22 O
ATOM 11 C2' G B 560 -12.847 91.955 125.293 1.00 76.61 C
ATOM 12 O2' G B 560 -14.255 91.842 125.341 1.00 76.33 O
ATOM 13 C1' G B 560 -12.425 92.636 123.990 1.00 74.79 C
ATOM 14 N9 G B 560 -11.110 92.180 123.554 1.00 72.20 N
ATOM 15 C8 G B 560 -9.903 92.817 123.730 1.00 71.25 C
ATOM 16 N7 G B 560 -8.894 92.139 123.257 1.00 70.74 N
ATOM 17 C5 G B 560 -9.469 90.989 122.728 1.00 70.11 C
ATOM 18 C6 G B 560 -8.875 89.874 122.081 1.00 69.24 C
ATOM 19 O6 G B 560 -7.684 89.672 121.828 1.00 69.27 O
ATOM 20 N1 G B 560 -9.825 88.930 121.716 1.00 67.99 N
ATOM 21 C2 G B 560 -11.170 89.038 121.941 1.00 68.05 C
ATOM 22 N2 G B 560 -11.918 88.009 121.530 1.00 68.11 N
ATOM 23 N3 G B 560 -11.739 90.074 122.531 1.00 68.86 N
ATOM 24 C4 G B 560 -10.835 91.003 122.899 1.00 70.46 C
ATOM 25 P A B 561 -12.172 91.839 128.694 1.00 81.57 P
ATOM 26 OP1 A B 561 -12.922 91.990 129.968 1.00 81.98 O
ATOM 27 OP2 A B 561 -10.709 92.100 128.672 1.00 81.07 O
ATOM 28 O5' A B 561 -12.410 90.369 128.128 1.00 79.62 O
TER
Atoms:
C2: (-10.383,94.480,120.487)
OP1: (-4.301,97.462,124.060)
OP2: (-4.533,95.353,122.599)
C4: (-8.629,93.027,119.993)
O5': (-6.472,96.880,122.988)
C3': (-9.206,96.879,123.863)
C1': (-9.976,96.625,121.658)
O4': (-8.917,97.571,121.650)
C5': (-7.125,98.153,123.167)
P: (-4.888,96.774,122.882)
O2: (-11.590,94.781,120.468)
C4': (-8.617,97.987,123.011)
C2': (-10.469,96.512,123.099)
O2': (-11.516,97.438,123.297)
N1: (-9.475,95.353,121.101)
N3: (-9.928,93.326,119.935)
N4: (-8.221,91.888,119.423)
C6: (-8.148,95.027,121.168)
C5: (-7.687,93.886,120.633)
O3': (-9.441,97.297,125.197)
OP1: (-4.301,97.462,124.060)
OP2: (-4.533,95.353,122.599)
C4: (-8.629,93.027,119.993)
O5': (-6.472,96.880,122.988)
C3': (-9.206,96.879,123.863)
C1': (-9.976,96.625,121.658)
O4': (-8.917,97.571,121.650)
C5': (-7.125,98.153,123.167)
P: (-4.888,96.774,122.882)
O2: (-11.590,94.781,120.468)
C4': (-8.617,97.987,123.011)
C2': (-10.469,96.512,123.099)
O2': (-11.516,97.438,123.297)
N1: (-9.475,95.353,121.101)
N3: (-9.928,93.326,119.935)
N4: (-8.221,91.888,119.423)
C6: (-8.148,95.027,121.168)
C5: (-7.687,93.886,120.633)
O3': (-9.441,97.297,125.197)
OP1: (-9.633,96.937,127.650)
OP2: (-7.923,95.624,126.264)
C3': (-12.294,92.935,126.317)
C1': (-12.425,92.636,123.990)
C5': (-11.763,95.445,126.123)
O6: (-7.684,89.672,121.828)
O4': (-12.346,94.028,124.254)
C8: (-9.903,92.817,123.730)
C2: (-11.170,89.038,121.941)
C6: (-8.875,89.874,122.081)
C5: (-9.469,90.989,122.728)
C4: (-10.835,91.003,122.899)
P: (-9.264,96.242,126.390)
C4': (-12.596,94.272,125.662)
C2': (-12.847,91.955,125.293)
O2': (-14.255,91.842,125.341)
N1: (-9.825,88.930,121.716)
N2: (-11.918,88.009,121.530)
N3: (-11.739,90.074,122.531)
N7: (-8.894,92.139,123.257)
N9: (-11.110,92.180,123.554)
O5': (-10.356,95.130,126.057)
O3': (-12.881,92.790,127.606)
OP2: (-7.923,95.624,126.264)
C3': (-12.294,92.935,126.317)
C1': (-12.425,92.636,123.990)
C5': (-11.763,95.445,126.123)
O6: (-7.684,89.672,121.828)
O4': (-12.346,94.028,124.254)
C8: (-9.903,92.817,123.730)
C2: (-11.170,89.038,121.941)
C6: (-8.875,89.874,122.081)
C5: (-9.469,90.989,122.728)
C4: (-10.835,91.003,122.899)
P: (-9.264,96.242,126.390)
C4': (-12.596,94.272,125.662)
C2': (-12.847,91.955,125.293)
O2': (-14.255,91.842,125.341)
N1: (-9.825,88.930,121.716)
N2: (-11.918,88.009,121.530)
N3: (-11.739,90.074,122.531)
N7: (-8.894,92.139,123.257)
N9: (-11.110,92.180,123.554)
O5': (-10.356,95.130,126.057)
O3': (-12.881,92.790,127.606)
Image (generated by PyMOL):