Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0559:0560
Extra
PDB:
ATOM 1 O3' C A 558 -4.276 98.191 121.950 1.00 59.67 O
ATOM 2 P C A 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 3 OP1 C A 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 4 OP2 C A 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 5 O5' C A 559 -6.343 97.530 123.225 1.00 62.19 O
ATOM 6 C5' C A 559 -6.949 98.816 123.458 1.00 63.79 C
ATOM 7 C4' C A 559 -8.445 98.715 123.280 1.00 66.27 C
ATOM 8 O4' C A 559 -8.726 98.305 121.914 1.00 66.28 O
ATOM 9 C3' C A 559 -9.118 97.645 124.127 1.00 67.96 C
ATOM 10 O3' C A 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 11 C2' C A 559 -10.376 97.342 123.326 1.00 67.73 C
ATOM 12 O2' C A 559 -11.381 98.324 123.504 1.00 68.89 O
ATOM 13 C1' C A 559 -9.838 97.420 121.896 1.00 66.02 C
ATOM 14 N1 C A 559 -9.393 96.118 121.353 1.00 65.33 N
ATOM 15 C2 C A 559 -10.329 95.297 120.689 1.00 65.48 C
ATOM 16 O2 C A 559 -11.508 95.681 120.590 1.00 67.80 O
ATOM 17 N3 C A 559 -9.923 94.108 120.175 1.00 64.12 N
ATOM 18 C4 C A 559 -8.649 93.723 120.307 1.00 63.13 C
ATOM 19 N4 C A 559 -8.291 92.543 119.783 1.00 60.95 N
ATOM 20 C5 C A 559 -7.683 94.531 120.982 1.00 63.77 C
ATOM 21 C6 C A 559 -8.093 95.708 121.484 1.00 64.06 C
ATOM 22 P G A 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 23 OP1 G A 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 24 OP2 G A 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 25 O5' G A 560 -10.378 95.913 126.270 1.00 71.92 O
TER
ATOM 1 O3' C B 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 2 P G B 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 3 OP1 G B 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 4 OP2 G B 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 5 O5' G B 560 -10.378 95.913 126.270 1.00 71.92 O
ATOM 6 C5' G B 560 -11.796 96.199 126.349 1.00 73.01 C
ATOM 7 C4' G B 560 -12.613 95.003 125.910 1.00 72.57 C
ATOM 8 O4' G B 560 -12.361 94.734 124.505 1.00 71.94 O
ATOM 9 C3' G B 560 -12.295 93.684 126.598 1.00 72.88 C
ATOM 10 O3' G B 560 -12.914 93.552 127.874 1.00 73.77 O
ATOM 11 C2' G B 560 -12.807 92.666 125.589 1.00 71.64 C
ATOM 12 O2' G B 560 -14.211 92.509 125.639 1.00 72.35 O
ATOM 13 C1' G B 560 -12.398 93.332 124.272 1.00 70.37 C
ATOM 14 N9 G B 560 -11.068 92.907 123.843 1.00 67.88 N
ATOM 15 C8 G B 560 -9.876 93.570 124.041 1.00 66.51 C
ATOM 16 N7 G B 560 -8.845 92.923 123.567 1.00 65.32 N
ATOM 17 C5 G B 560 -9.388 91.768 123.015 1.00 65.62 C
ATOM 18 C6 G B 560 -8.757 90.677 122.350 1.00 65.85 C
ATOM 19 O6 G B 560 -7.554 90.509 122.114 1.00 66.14 O
ATOM 20 N1 G B 560 -9.683 89.717 121.950 1.00 63.92 N
ATOM 21 C2 G B 560 -11.034 89.786 122.166 1.00 63.51 C
ATOM 22 N2 G B 560 -11.749 88.746 121.723 1.00 61.57 N
ATOM 23 N3 G B 560 -11.637 90.797 122.776 1.00 64.35 N
ATOM 24 C4 G B 560 -10.759 91.745 123.172 1.00 65.77 C
ATOM 25 P A B 561 -12.283 92.541 128.959 1.00 76.34 P
ATOM 26 OP1 A B 561 -13.138 92.625 130.178 1.00 75.87 O
ATOM 27 OP2 A B 561 -10.820 92.808 129.073 1.00 74.84 O
ATOM 28 O5' A B 561 -12.472 91.102 128.295 1.00 72.51 O
TER
ATOM 2 P C A 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 3 OP1 C A 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 4 OP2 C A 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 5 O5' C A 559 -6.343 97.530 123.225 1.00 62.19 O
ATOM 6 C5' C A 559 -6.949 98.816 123.458 1.00 63.79 C
ATOM 7 C4' C A 559 -8.445 98.715 123.280 1.00 66.27 C
ATOM 8 O4' C A 559 -8.726 98.305 121.914 1.00 66.28 O
ATOM 9 C3' C A 559 -9.118 97.645 124.127 1.00 67.96 C
ATOM 10 O3' C A 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 11 C2' C A 559 -10.376 97.342 123.326 1.00 67.73 C
ATOM 12 O2' C A 559 -11.381 98.324 123.504 1.00 68.89 O
ATOM 13 C1' C A 559 -9.838 97.420 121.896 1.00 66.02 C
ATOM 14 N1 C A 559 -9.393 96.118 121.353 1.00 65.33 N
ATOM 15 C2 C A 559 -10.329 95.297 120.689 1.00 65.48 C
ATOM 16 O2 C A 559 -11.508 95.681 120.590 1.00 67.80 O
ATOM 17 N3 C A 559 -9.923 94.108 120.175 1.00 64.12 N
ATOM 18 C4 C A 559 -8.649 93.723 120.307 1.00 63.13 C
ATOM 19 N4 C A 559 -8.291 92.543 119.783 1.00 60.95 N
ATOM 20 C5 C A 559 -7.683 94.531 120.982 1.00 63.77 C
ATOM 21 C6 C A 559 -8.093 95.708 121.484 1.00 64.06 C
ATOM 22 P G A 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 23 OP1 G A 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 24 OP2 G A 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 25 O5' G A 560 -10.378 95.913 126.270 1.00 71.92 O
TER
ATOM 1 O3' C B 559 -9.389 98.083 125.456 1.00 69.27 O
ATOM 2 P G B 560 -9.304 97.027 126.668 1.00 71.98 P
ATOM 3 OP1 G B 560 -9.784 97.726 127.891 1.00 71.23 O
ATOM 4 OP2 G B 560 -7.953 96.404 126.668 1.00 70.85 O
ATOM 5 O5' G B 560 -10.378 95.913 126.270 1.00 71.92 O
ATOM 6 C5' G B 560 -11.796 96.199 126.349 1.00 73.01 C
ATOM 7 C4' G B 560 -12.613 95.003 125.910 1.00 72.57 C
ATOM 8 O4' G B 560 -12.361 94.734 124.505 1.00 71.94 O
ATOM 9 C3' G B 560 -12.295 93.684 126.598 1.00 72.88 C
ATOM 10 O3' G B 560 -12.914 93.552 127.874 1.00 73.77 O
ATOM 11 C2' G B 560 -12.807 92.666 125.589 1.00 71.64 C
ATOM 12 O2' G B 560 -14.211 92.509 125.639 1.00 72.35 O
ATOM 13 C1' G B 560 -12.398 93.332 124.272 1.00 70.37 C
ATOM 14 N9 G B 560 -11.068 92.907 123.843 1.00 67.88 N
ATOM 15 C8 G B 560 -9.876 93.570 124.041 1.00 66.51 C
ATOM 16 N7 G B 560 -8.845 92.923 123.567 1.00 65.32 N
ATOM 17 C5 G B 560 -9.388 91.768 123.015 1.00 65.62 C
ATOM 18 C6 G B 560 -8.757 90.677 122.350 1.00 65.85 C
ATOM 19 O6 G B 560 -7.554 90.509 122.114 1.00 66.14 O
ATOM 20 N1 G B 560 -9.683 89.717 121.950 1.00 63.92 N
ATOM 21 C2 G B 560 -11.034 89.786 122.166 1.00 63.51 C
ATOM 22 N2 G B 560 -11.749 88.746 121.723 1.00 61.57 N
ATOM 23 N3 G B 560 -11.637 90.797 122.776 1.00 64.35 N
ATOM 24 C4 G B 560 -10.759 91.745 123.172 1.00 65.77 C
ATOM 25 P A B 561 -12.283 92.541 128.959 1.00 76.34 P
ATOM 26 OP1 A B 561 -13.138 92.625 130.178 1.00 75.87 O
ATOM 27 OP2 A B 561 -10.820 92.808 129.073 1.00 74.84 O
ATOM 28 O5' A B 561 -12.472 91.102 128.295 1.00 72.51 O
TER
Atoms:
C2: (-10.329,95.297,120.689)
OP1: (-4.225,98.043,124.441)
OP2: (-4.448,95.904,123.006)
C4: (-8.649,93.723,120.307)
O5': (-6.343,97.530,123.225)
C3': (-9.118,97.645,124.127)
C1': (-9.838,97.420,121.896)
O4': (-8.726,98.305,121.914)
C5': (-6.949,98.816,123.458)
P: (-4.760,97.351,123.234)
O2: (-11.508,95.681,120.590)
C4': (-8.445,98.715,123.280)
C2': (-10.376,97.342,123.326)
O2': (-11.381,98.324,123.504)
N1: (-9.393,96.118,121.353)
N3: (-9.923,94.108,120.175)
N4: (-8.291,92.543,119.783)
C6: (-8.093,95.708,121.484)
C5: (-7.683,94.531,120.982)
O3': (-9.389,98.083,125.456)
OP1: (-4.225,98.043,124.441)
OP2: (-4.448,95.904,123.006)
C4: (-8.649,93.723,120.307)
O5': (-6.343,97.530,123.225)
C3': (-9.118,97.645,124.127)
C1': (-9.838,97.420,121.896)
O4': (-8.726,98.305,121.914)
C5': (-6.949,98.816,123.458)
P: (-4.760,97.351,123.234)
O2: (-11.508,95.681,120.590)
C4': (-8.445,98.715,123.280)
C2': (-10.376,97.342,123.326)
O2': (-11.381,98.324,123.504)
N1: (-9.393,96.118,121.353)
N3: (-9.923,94.108,120.175)
N4: (-8.291,92.543,119.783)
C6: (-8.093,95.708,121.484)
C5: (-7.683,94.531,120.982)
O3': (-9.389,98.083,125.456)
OP1: (-9.784,97.726,127.891)
OP2: (-7.953,96.404,126.668)
C3': (-12.295,93.684,126.598)
C1': (-12.398,93.332,124.272)
C5': (-11.796,96.199,126.349)
O6: (-7.554,90.509,122.114)
O4': (-12.361,94.734,124.505)
C8: (-9.876,93.570,124.041)
C2: (-11.034,89.786,122.166)
C6: (-8.757,90.677,122.350)
C5: (-9.388,91.768,123.015)
C4: (-10.759,91.745,123.172)
P: (-9.304,97.027,126.668)
C4': (-12.613,95.003,125.910)
C2': (-12.807,92.666,125.589)
O2': (-14.211,92.509,125.639)
N1: (-9.683,89.717,121.950)
N2: (-11.749,88.746,121.723)
N3: (-11.637,90.797,122.776)
N7: (-8.845,92.923,123.567)
N9: (-11.068,92.907,123.843)
O5': (-10.378,95.913,126.270)
O3': (-12.914,93.552,127.874)
OP2: (-7.953,96.404,126.668)
C3': (-12.295,93.684,126.598)
C1': (-12.398,93.332,124.272)
C5': (-11.796,96.199,126.349)
O6: (-7.554,90.509,122.114)
O4': (-12.361,94.734,124.505)
C8: (-9.876,93.570,124.041)
C2: (-11.034,89.786,122.166)
C6: (-8.757,90.677,122.350)
C5: (-9.388,91.768,123.015)
C4: (-10.759,91.745,123.172)
P: (-9.304,97.027,126.668)
C4': (-12.613,95.003,125.910)
C2': (-12.807,92.666,125.589)
O2': (-14.211,92.509,125.639)
N1: (-9.683,89.717,121.950)
N2: (-11.749,88.746,121.723)
N3: (-11.637,90.797,122.776)
N7: (-8.845,92.923,123.567)
N9: (-11.068,92.907,123.843)
O5': (-10.378,95.913,126.270)
O3': (-12.914,93.552,127.874)
Image (generated by PyMOL):