Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1276:A1277
Extra
PDB:
ATOM 1 O3' U A1275 40.669 -80.481 -4.944 1.00 35.64 O
ATOM 2 P C A1276 39.830 -81.052 -6.179 1.00 28.26 P
ATOM 3 OP1 C A1276 40.389 -82.388 -6.514 1.00 25.71 O
ATOM 4 OP2 C A1276 39.799 -79.985 -7.227 1.00 28.12 O
ATOM 5 O5' C A1276 38.393 -81.231 -5.542 1.00 35.90 O
ATOM 6 C5' C A1276 38.196 -82.119 -4.464 1.00 33.62 C
ATOM 7 C4' C A1276 36.854 -81.921 -3.834 1.00 31.42 C
ATOM 8 O4' C A1276 36.794 -80.627 -3.203 1.00 37.14 O
ATOM 9 C3' C A1276 35.678 -81.934 -4.775 1.00 27.06 C
ATOM 10 O3' C A1276 35.285 -83.249 -5.105 1.00 31.27 O
ATOM 11 C2' C A1276 34.625 -81.166 -3.992 1.00 35.43 C
ATOM 12 O2' C A1276 34.011 -82.013 -3.033 1.00 43.22 O
ATOM 13 C1' C A1276 35.478 -80.143 -3.238 1.00 35.29 C
ATOM 14 N1 C A1276 35.487 -78.807 -3.874 1.00 36.02 N
ATOM 15 C2 C A1276 34.428 -77.977 -3.631 1.00 35.02 C
ATOM 16 O2 C A1276 33.539 -78.462 -2.930 1.00 35.94 O
ATOM 17 N3 C A1276 34.407 -76.739 -4.159 1.00 31.59 N
ATOM 18 C4 C A1276 35.417 -76.304 -4.902 1.00 30.87 C
ATOM 19 N4 C A1276 35.402 -75.071 -5.435 1.00 35.36 N
ATOM 20 C5 C A1276 36.529 -77.135 -5.142 1.00 35.10 C
ATOM 21 C6 C A1276 36.536 -78.359 -4.608 1.00 38.78 C
ATOM 22 P G A1277 35.040 -83.659 -6.633 1.00 29.77 P
ATOM 23 OP1 G A1277 34.997 -85.122 -6.683 1.00 38.06 O
ATOM 24 OP2 G A1277 36.049 -82.955 -7.449 1.00 36.76 O
ATOM 25 O5' G A1277 33.587 -83.053 -6.917 1.00 32.15 O
TER
ATOM 1 O3' C B1276 35.285 -83.249 -5.105 1.00 31.27 O
ATOM 2 P G B1277 35.040 -83.659 -6.633 1.00 29.77 P
ATOM 3 OP1 G B1277 34.997 -85.122 -6.683 1.00 38.06 O
ATOM 4 OP2 G B1277 36.049 -82.955 -7.449 1.00 36.76 O
ATOM 5 O5' G B1277 33.587 -83.053 -6.917 1.00 32.15 O
ATOM 6 C5' G B1277 32.505 -83.287 -6.027 1.00 27.54 C
ATOM 7 C4' G B1277 31.443 -82.232 -6.155 1.00 29.17 C
ATOM 8 O4' G B1277 31.962 -80.976 -5.711 1.00 32.72 O
ATOM 9 C3' G B1277 30.925 -81.962 -7.563 1.00 31.51 C
ATOM 10 O3' G B1277 29.886 -82.852 -7.910 1.00 33.28 O
ATOM 11 C2' G B1277 30.462 -80.514 -7.493 1.00 33.86 C
ATOM 12 O2' G B1277 29.151 -80.435 -6.953 1.00 37.48 O
ATOM 13 C1' G B1277 31.424 -79.917 -6.473 1.00 36.92 C
ATOM 14 N9 G B1277 32.541 -79.198 -7.095 1.00 30.99 N
ATOM 15 C8 G B1277 33.621 -79.881 -7.564 1.00 38.39 C
ATOM 16 N7 G B1277 34.551 -79.105 -8.030 1.00 50.80 N
ATOM 17 C5 G B1277 34.062 -77.812 -7.838 1.00 44.05 C
ATOM 18 C6 G B1277 34.691 -76.568 -8.175 1.00 43.24 C
ATOM 19 O6 G B1277 35.818 -76.417 -8.710 1.00 50.39 O
ATOM 20 N1 G B1277 33.899 -75.470 -7.828 1.00 33.74 N
ATOM 21 C2 G B1277 32.673 -75.597 -7.227 1.00 41.45 C
ATOM 22 N2 G B1277 32.084 -74.423 -6.972 1.00 39.72 N
ATOM 23 N3 G B1277 32.073 -76.764 -6.900 1.00 42.38 N
ATOM 24 C4 G B1277 32.821 -77.846 -7.231 1.00 32.45 C
ATOM 25 P U B1278 29.576 -83.203 -9.434 1.00 33.85 P
ATOM 26 OP1 U B1278 30.208 -84.498 -9.732 1.00 35.50 O
ATOM 27 OP2 U B1278 29.948 -82.021 -10.242 1.00 30.58 O
ATOM 28 O5' U B1278 28.012 -83.384 -9.416 1.00 39.86 O
TER
ATOM 2 P C A1276 39.830 -81.052 -6.179 1.00 28.26 P
ATOM 3 OP1 C A1276 40.389 -82.388 -6.514 1.00 25.71 O
ATOM 4 OP2 C A1276 39.799 -79.985 -7.227 1.00 28.12 O
ATOM 5 O5' C A1276 38.393 -81.231 -5.542 1.00 35.90 O
ATOM 6 C5' C A1276 38.196 -82.119 -4.464 1.00 33.62 C
ATOM 7 C4' C A1276 36.854 -81.921 -3.834 1.00 31.42 C
ATOM 8 O4' C A1276 36.794 -80.627 -3.203 1.00 37.14 O
ATOM 9 C3' C A1276 35.678 -81.934 -4.775 1.00 27.06 C
ATOM 10 O3' C A1276 35.285 -83.249 -5.105 1.00 31.27 O
ATOM 11 C2' C A1276 34.625 -81.166 -3.992 1.00 35.43 C
ATOM 12 O2' C A1276 34.011 -82.013 -3.033 1.00 43.22 O
ATOM 13 C1' C A1276 35.478 -80.143 -3.238 1.00 35.29 C
ATOM 14 N1 C A1276 35.487 -78.807 -3.874 1.00 36.02 N
ATOM 15 C2 C A1276 34.428 -77.977 -3.631 1.00 35.02 C
ATOM 16 O2 C A1276 33.539 -78.462 -2.930 1.00 35.94 O
ATOM 17 N3 C A1276 34.407 -76.739 -4.159 1.00 31.59 N
ATOM 18 C4 C A1276 35.417 -76.304 -4.902 1.00 30.87 C
ATOM 19 N4 C A1276 35.402 -75.071 -5.435 1.00 35.36 N
ATOM 20 C5 C A1276 36.529 -77.135 -5.142 1.00 35.10 C
ATOM 21 C6 C A1276 36.536 -78.359 -4.608 1.00 38.78 C
ATOM 22 P G A1277 35.040 -83.659 -6.633 1.00 29.77 P
ATOM 23 OP1 G A1277 34.997 -85.122 -6.683 1.00 38.06 O
ATOM 24 OP2 G A1277 36.049 -82.955 -7.449 1.00 36.76 O
ATOM 25 O5' G A1277 33.587 -83.053 -6.917 1.00 32.15 O
TER
ATOM 1 O3' C B1276 35.285 -83.249 -5.105 1.00 31.27 O
ATOM 2 P G B1277 35.040 -83.659 -6.633 1.00 29.77 P
ATOM 3 OP1 G B1277 34.997 -85.122 -6.683 1.00 38.06 O
ATOM 4 OP2 G B1277 36.049 -82.955 -7.449 1.00 36.76 O
ATOM 5 O5' G B1277 33.587 -83.053 -6.917 1.00 32.15 O
ATOM 6 C5' G B1277 32.505 -83.287 -6.027 1.00 27.54 C
ATOM 7 C4' G B1277 31.443 -82.232 -6.155 1.00 29.17 C
ATOM 8 O4' G B1277 31.962 -80.976 -5.711 1.00 32.72 O
ATOM 9 C3' G B1277 30.925 -81.962 -7.563 1.00 31.51 C
ATOM 10 O3' G B1277 29.886 -82.852 -7.910 1.00 33.28 O
ATOM 11 C2' G B1277 30.462 -80.514 -7.493 1.00 33.86 C
ATOM 12 O2' G B1277 29.151 -80.435 -6.953 1.00 37.48 O
ATOM 13 C1' G B1277 31.424 -79.917 -6.473 1.00 36.92 C
ATOM 14 N9 G B1277 32.541 -79.198 -7.095 1.00 30.99 N
ATOM 15 C8 G B1277 33.621 -79.881 -7.564 1.00 38.39 C
ATOM 16 N7 G B1277 34.551 -79.105 -8.030 1.00 50.80 N
ATOM 17 C5 G B1277 34.062 -77.812 -7.838 1.00 44.05 C
ATOM 18 C6 G B1277 34.691 -76.568 -8.175 1.00 43.24 C
ATOM 19 O6 G B1277 35.818 -76.417 -8.710 1.00 50.39 O
ATOM 20 N1 G B1277 33.899 -75.470 -7.828 1.00 33.74 N
ATOM 21 C2 G B1277 32.673 -75.597 -7.227 1.00 41.45 C
ATOM 22 N2 G B1277 32.084 -74.423 -6.972 1.00 39.72 N
ATOM 23 N3 G B1277 32.073 -76.764 -6.900 1.00 42.38 N
ATOM 24 C4 G B1277 32.821 -77.846 -7.231 1.00 32.45 C
ATOM 25 P U B1278 29.576 -83.203 -9.434 1.00 33.85 P
ATOM 26 OP1 U B1278 30.208 -84.498 -9.732 1.00 35.50 O
ATOM 27 OP2 U B1278 29.948 -82.021 -10.242 1.00 30.58 O
ATOM 28 O5' U B1278 28.012 -83.384 -9.416 1.00 39.86 O
TER
Atoms:
C2: (34.428,-77.977,-3.631)
OP1: (40.389,-82.388,-6.514)
OP2: (39.799,-79.985,-7.227)
C4: (35.417,-76.304,-4.902)
O5': (38.393,-81.231,-5.542)
C3': (35.678,-81.934,-4.775)
C1': (35.478,-80.143,-3.238)
O4': (36.794,-80.627,-3.203)
C5': (38.196,-82.119,-4.464)
P: (39.830,-81.052,-6.179)
O2: (33.539,-78.462,-2.930)
C4': (36.854,-81.921,-3.834)
C2': (34.625,-81.166,-3.992)
O2': (34.011,-82.013,-3.033)
N1: (35.487,-78.807,-3.874)
N3: (34.407,-76.739,-4.159)
N4: (35.402,-75.071,-5.435)
C6: (36.536,-78.359,-4.608)
C5: (36.529,-77.135,-5.142)
O3': (35.285,-83.249,-5.105)
OP1: (40.389,-82.388,-6.514)
OP2: (39.799,-79.985,-7.227)
C4: (35.417,-76.304,-4.902)
O5': (38.393,-81.231,-5.542)
C3': (35.678,-81.934,-4.775)
C1': (35.478,-80.143,-3.238)
O4': (36.794,-80.627,-3.203)
C5': (38.196,-82.119,-4.464)
P: (39.830,-81.052,-6.179)
O2: (33.539,-78.462,-2.930)
C4': (36.854,-81.921,-3.834)
C2': (34.625,-81.166,-3.992)
O2': (34.011,-82.013,-3.033)
N1: (35.487,-78.807,-3.874)
N3: (34.407,-76.739,-4.159)
N4: (35.402,-75.071,-5.435)
C6: (36.536,-78.359,-4.608)
C5: (36.529,-77.135,-5.142)
O3': (35.285,-83.249,-5.105)
OP1: (34.997,-85.122,-6.683)
OP2: (36.049,-82.955,-7.449)
C3': (30.925,-81.962,-7.563)
C1': (31.424,-79.917,-6.473)
C5': (32.505,-83.287,-6.027)
O6: (35.818,-76.417,-8.710)
O4': (31.962,-80.976,-5.711)
C8: (33.621,-79.881,-7.564)
C2: (32.673,-75.597,-7.227)
C6: (34.691,-76.568,-8.175)
C5: (34.062,-77.812,-7.838)
C4: (32.821,-77.846,-7.231)
P: (35.040,-83.659,-6.633)
C4': (31.443,-82.232,-6.155)
C2': (30.462,-80.514,-7.493)
O2': (29.151,-80.435,-6.953)
N1: (33.899,-75.470,-7.828)
N2: (32.084,-74.423,-6.972)
N3: (32.073,-76.764,-6.900)
N7: (34.551,-79.105,-8.030)
N9: (32.541,-79.198,-7.095)
O5': (33.587,-83.053,-6.917)
O3': (29.886,-82.852,-7.910)
OP2: (36.049,-82.955,-7.449)
C3': (30.925,-81.962,-7.563)
C1': (31.424,-79.917,-6.473)
C5': (32.505,-83.287,-6.027)
O6: (35.818,-76.417,-8.710)
O4': (31.962,-80.976,-5.711)
C8: (33.621,-79.881,-7.564)
C2: (32.673,-75.597,-7.227)
C6: (34.691,-76.568,-8.175)
C5: (34.062,-77.812,-7.838)
C4: (32.821,-77.846,-7.231)
P: (35.040,-83.659,-6.633)
C4': (31.443,-82.232,-6.155)
C2': (30.462,-80.514,-7.493)
O2': (29.151,-80.435,-6.953)
N1: (33.899,-75.470,-7.828)
N2: (32.084,-74.423,-6.972)
N3: (32.073,-76.764,-6.900)
N7: (34.551,-79.105,-8.030)
N9: (32.541,-79.198,-7.095)
O5': (33.587,-83.053,-6.917)
O3': (29.886,-82.852,-7.910)
Image (generated by PyMOL):