Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0259:0366
Extra
PDB:
ATOM 1 O3' U A 258 77.629 102.476 6.142 1.00 61.65 O
ATOM 2 P C A 259 76.231 101.914 6.709 1.00 66.11 P
ATOM 3 OP1 C A 259 75.137 102.874 6.403 1.00 63.64 O
ATOM 4 OP2 C A 259 76.480 101.509 8.114 1.00 67.28 O
ATOM 5 O5' C A 259 75.970 100.592 5.863 1.00 70.21 O
ATOM 6 C5' C A 259 76.968 99.560 5.773 1.00 76.89 C
ATOM 7 C4' C A 259 76.323 98.199 5.906 1.00 81.88 C
ATOM 8 O4' C A 259 77.291 97.175 5.556 1.00 82.92 O
ATOM 9 C3' C A 259 75.812 97.841 7.301 1.00 84.09 C
ATOM 10 O3' C A 259 74.712 96.933 7.186 1.00 87.17 O
ATOM 11 C2' C A 259 77.005 97.087 7.884 1.00 84.64 C
ATOM 12 O2' C A 259 76.649 96.216 8.941 1.00 85.10 O
ATOM 13 C1' C A 259 77.478 96.308 6.653 1.00 84.04 C
ATOM 14 N1 C A 259 78.882 95.860 6.640 1.00 84.70 N
ATOM 15 C2 C A 259 79.155 94.517 6.320 1.00 85.77 C
ATOM 16 O2 C A 259 78.208 93.740 6.097 1.00 86.13 O
ATOM 17 N3 C A 259 80.442 94.100 6.262 1.00 86.12 N
ATOM 18 C4 C A 259 81.433 94.958 6.512 1.00 86.26 C
ATOM 19 N4 C A 259 82.684 94.503 6.426 1.00 86.15 N
ATOM 20 C5 C A 259 81.185 96.323 6.856 1.00 85.92 C
ATOM 21 C6 C A 259 79.907 96.726 6.910 1.00 85.02 C
ATOM 22 P A A 260 73.219 97.484 6.921 1.00 89.37 P
ATOM 23 OP1 A A 260 73.287 98.733 6.121 1.00 90.35 O
ATOM 24 OP2 A A 260 72.479 97.481 8.212 1.00 89.26 O
ATOM 25 O5' A A 260 72.598 96.358 5.983 1.00 89.17 O
TER
ATOM 1 O3' C B 365 92.357 101.622 5.608 1.00 44.69 O
ATOM 2 P A B 366 92.522 101.072 7.110 1.00 45.75 P
ATOM 3 OP1 A B 366 93.280 102.133 7.821 1.00 44.84 O
ATOM 4 OP2 A B 366 93.039 99.683 7.105 1.00 43.72 O
ATOM 5 O5' A B 366 91.028 101.023 7.667 1.00 44.75 O
ATOM 6 C5' A B 366 90.252 102.230 7.814 1.00 44.26 C
ATOM 7 C4' A B 366 88.830 101.900 8.201 1.00 44.19 C
ATOM 8 O4' A B 366 88.186 101.190 7.115 1.00 46.98 O
ATOM 9 C3' A B 366 88.655 100.984 9.402 1.00 43.88 C
ATOM 10 O3' A B 366 88.732 101.721 10.617 1.00 41.90 O
ATOM 11 C2' A B 366 87.266 100.403 9.172 1.00 44.39 C
ATOM 12 O2' A B 366 86.225 101.261 9.584 1.00 44.50 O
ATOM 13 C1' A B 366 87.237 100.279 7.645 1.00 46.89 C
ATOM 14 N9 A B 366 87.547 98.933 7.159 1.00 48.28 N
ATOM 15 C8 A B 366 88.770 98.374 6.863 1.00 47.88 C
ATOM 16 N7 A B 366 88.696 97.124 6.472 1.00 47.46 N
ATOM 17 C5 A B 366 87.337 96.843 6.507 1.00 48.65 C
ATOM 18 C6 A B 366 86.602 95.682 6.212 1.00 49.41 C
ATOM 19 N6 A B 366 87.157 94.536 5.818 1.00 50.43 N
ATOM 20 N1 A B 366 85.259 95.738 6.344 1.00 49.87 N
ATOM 21 C2 A B 366 84.701 96.886 6.754 1.00 50.28 C
ATOM 22 N3 A B 366 85.284 98.041 7.067 1.00 48.55 N
ATOM 23 C4 A B 366 86.618 97.951 6.921 1.00 48.38 C
ATOM 24 P G B 367 89.117 100.974 11.988 1.00 40.49 P
ATOM 25 OP1 G B 367 90.393 100.236 11.794 1.00 37.31 O
ATOM 26 OP2 G B 367 87.910 100.251 12.465 1.00 40.85 O
ATOM 27 O5' G B 367 89.409 102.172 12.994 1.00 38.12 O
TER
ATOM 2 P C A 259 76.231 101.914 6.709 1.00 66.11 P
ATOM 3 OP1 C A 259 75.137 102.874 6.403 1.00 63.64 O
ATOM 4 OP2 C A 259 76.480 101.509 8.114 1.00 67.28 O
ATOM 5 O5' C A 259 75.970 100.592 5.863 1.00 70.21 O
ATOM 6 C5' C A 259 76.968 99.560 5.773 1.00 76.89 C
ATOM 7 C4' C A 259 76.323 98.199 5.906 1.00 81.88 C
ATOM 8 O4' C A 259 77.291 97.175 5.556 1.00 82.92 O
ATOM 9 C3' C A 259 75.812 97.841 7.301 1.00 84.09 C
ATOM 10 O3' C A 259 74.712 96.933 7.186 1.00 87.17 O
ATOM 11 C2' C A 259 77.005 97.087 7.884 1.00 84.64 C
ATOM 12 O2' C A 259 76.649 96.216 8.941 1.00 85.10 O
ATOM 13 C1' C A 259 77.478 96.308 6.653 1.00 84.04 C
ATOM 14 N1 C A 259 78.882 95.860 6.640 1.00 84.70 N
ATOM 15 C2 C A 259 79.155 94.517 6.320 1.00 85.77 C
ATOM 16 O2 C A 259 78.208 93.740 6.097 1.00 86.13 O
ATOM 17 N3 C A 259 80.442 94.100 6.262 1.00 86.12 N
ATOM 18 C4 C A 259 81.433 94.958 6.512 1.00 86.26 C
ATOM 19 N4 C A 259 82.684 94.503 6.426 1.00 86.15 N
ATOM 20 C5 C A 259 81.185 96.323 6.856 1.00 85.92 C
ATOM 21 C6 C A 259 79.907 96.726 6.910 1.00 85.02 C
ATOM 22 P A A 260 73.219 97.484 6.921 1.00 89.37 P
ATOM 23 OP1 A A 260 73.287 98.733 6.121 1.00 90.35 O
ATOM 24 OP2 A A 260 72.479 97.481 8.212 1.00 89.26 O
ATOM 25 O5' A A 260 72.598 96.358 5.983 1.00 89.17 O
TER
ATOM 1 O3' C B 365 92.357 101.622 5.608 1.00 44.69 O
ATOM 2 P A B 366 92.522 101.072 7.110 1.00 45.75 P
ATOM 3 OP1 A B 366 93.280 102.133 7.821 1.00 44.84 O
ATOM 4 OP2 A B 366 93.039 99.683 7.105 1.00 43.72 O
ATOM 5 O5' A B 366 91.028 101.023 7.667 1.00 44.75 O
ATOM 6 C5' A B 366 90.252 102.230 7.814 1.00 44.26 C
ATOM 7 C4' A B 366 88.830 101.900 8.201 1.00 44.19 C
ATOM 8 O4' A B 366 88.186 101.190 7.115 1.00 46.98 O
ATOM 9 C3' A B 366 88.655 100.984 9.402 1.00 43.88 C
ATOM 10 O3' A B 366 88.732 101.721 10.617 1.00 41.90 O
ATOM 11 C2' A B 366 87.266 100.403 9.172 1.00 44.39 C
ATOM 12 O2' A B 366 86.225 101.261 9.584 1.00 44.50 O
ATOM 13 C1' A B 366 87.237 100.279 7.645 1.00 46.89 C
ATOM 14 N9 A B 366 87.547 98.933 7.159 1.00 48.28 N
ATOM 15 C8 A B 366 88.770 98.374 6.863 1.00 47.88 C
ATOM 16 N7 A B 366 88.696 97.124 6.472 1.00 47.46 N
ATOM 17 C5 A B 366 87.337 96.843 6.507 1.00 48.65 C
ATOM 18 C6 A B 366 86.602 95.682 6.212 1.00 49.41 C
ATOM 19 N6 A B 366 87.157 94.536 5.818 1.00 50.43 N
ATOM 20 N1 A B 366 85.259 95.738 6.344 1.00 49.87 N
ATOM 21 C2 A B 366 84.701 96.886 6.754 1.00 50.28 C
ATOM 22 N3 A B 366 85.284 98.041 7.067 1.00 48.55 N
ATOM 23 C4 A B 366 86.618 97.951 6.921 1.00 48.38 C
ATOM 24 P G B 367 89.117 100.974 11.988 1.00 40.49 P
ATOM 25 OP1 G B 367 90.393 100.236 11.794 1.00 37.31 O
ATOM 26 OP2 G B 367 87.910 100.251 12.465 1.00 40.85 O
ATOM 27 O5' G B 367 89.409 102.172 12.994 1.00 38.12 O
TER
Atoms:
C2: (79.155,94.517,6.320)
OP1: (75.137,102.874,6.403)
OP2: (76.480,101.509,8.114)
C4: (81.433,94.958,6.512)
O5': (75.970,100.592,5.863)
C3': (75.812,97.841,7.301)
C1': (77.478,96.308,6.653)
O4': (77.291,97.175,5.556)
C5': (76.968,99.560,5.773)
P: (76.231,101.914,6.709)
O2: (78.208,93.740,6.097)
C4': (76.323,98.199,5.906)
C2': (77.005,97.087,7.884)
O2': (76.649,96.216,8.941)
N1: (78.882,95.860,6.640)
N3: (80.442,94.100,6.262)
N4: (82.684,94.503,6.426)
C6: (79.907,96.726,6.910)
C5: (81.185,96.323,6.856)
O3': (74.712,96.933,7.186)
OP1: (75.137,102.874,6.403)
OP2: (76.480,101.509,8.114)
C4: (81.433,94.958,6.512)
O5': (75.970,100.592,5.863)
C3': (75.812,97.841,7.301)
C1': (77.478,96.308,6.653)
O4': (77.291,97.175,5.556)
C5': (76.968,99.560,5.773)
P: (76.231,101.914,6.709)
O2: (78.208,93.740,6.097)
C4': (76.323,98.199,5.906)
C2': (77.005,97.087,7.884)
O2': (76.649,96.216,8.941)
N1: (78.882,95.860,6.640)
N3: (80.442,94.100,6.262)
N4: (82.684,94.503,6.426)
C6: (79.907,96.726,6.910)
C5: (81.185,96.323,6.856)
O3': (74.712,96.933,7.186)
OP1: (93.280,102.133,7.821)
OP2: (93.039,99.683,7.105)
C3': (88.655,100.984,9.402)
C1': (87.237,100.279,7.645)
C5': (90.252,102.230,7.814)
O4': (88.186,101.190,7.115)
C8: (88.770,98.374,6.863)
O2': (86.225,101.261,9.584)
C6: (86.602,95.682,6.212)
C5: (87.337,96.843,6.507)
C4: (86.618,97.951,6.921)
P: (92.522,101.072,7.110)
C4': (88.830,101.900,8.201)
C2': (87.266,100.403,9.172)
C2: (84.701,96.886,6.754)
N1: (85.259,95.738,6.344)
N3: (85.284,98.041,7.067)
N6: (87.157,94.536,5.818)
N7: (88.696,97.124,6.472)
N9: (87.547,98.933,7.159)
O5': (91.028,101.023,7.667)
O3': (88.732,101.721,10.617)
OP2: (93.039,99.683,7.105)
C3': (88.655,100.984,9.402)
C1': (87.237,100.279,7.645)
C5': (90.252,102.230,7.814)
O4': (88.186,101.190,7.115)
C8: (88.770,98.374,6.863)
O2': (86.225,101.261,9.584)
C6: (86.602,95.682,6.212)
C5: (87.337,96.843,6.507)
C4: (86.618,97.951,6.921)
P: (92.522,101.072,7.110)
C4': (88.830,101.900,8.201)
C2': (87.266,100.403,9.172)
C2: (84.701,96.886,6.754)
N1: (85.259,95.738,6.344)
N3: (85.284,98.041,7.067)
N6: (87.157,94.536,5.818)
N7: (88.696,97.124,6.472)
N9: (87.547,98.933,7.159)
O5': (91.028,101.023,7.667)
O3': (88.732,101.721,10.617)
Image (generated by PyMOL):