Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61229:61239
Extra
PDB:
ATOM 1 O3' A A1228 229.808 -41.764 317.518 1.00121.04 O
ATOM 2 P C A1229 228.514 -42.728 317.565 1.00139.39 P
ATOM 3 OP1 C A1229 228.806 -43.894 316.694 1.00138.55 O
ATOM 4 OP2 C A1229 227.324 -41.894 317.262 1.00139.82 O
ATOM 5 O5' C A1229 228.482 -43.195 319.083 1.00140.19 O
ATOM 6 C5' C A1229 229.301 -44.262 319.538 1.00139.94 C
ATOM 7 C4' C A1229 228.599 -45.066 320.602 1.00140.64 C
ATOM 8 O4' C A1229 228.581 -44.323 321.853 1.00141.57 O
ATOM 9 C3' C A1229 227.134 -45.377 320.332 1.00140.95 C
ATOM 10 O3' C A1229 226.956 -46.494 319.469 1.00140.28 O
ATOM 11 C2' C A1229 226.576 -45.585 321.733 1.00141.96 C
ATOM 12 O2' C A1229 226.915 -46.876 322.214 1.00141.84 O
ATOM 13 C1' C A1229 227.363 -44.546 322.533 1.00142.38 C
ATOM 14 N1 C A1229 226.637 -43.248 322.638 1.00143.03 N
ATOM 15 C2 C A1229 225.656 -43.026 323.616 1.00144.09 C
ATOM 16 O2 C A1229 225.387 -43.943 324.414 1.00144.48 O
ATOM 17 N3 C A1229 225.029 -41.810 323.654 1.00144.66 N
ATOM 18 C4 C A1229 225.334 -40.834 322.780 1.00144.22 C
ATOM 19 N4 C A1229 224.705 -39.655 322.837 1.00144.81 N
ATOM 20 C5 C A1229 226.321 -41.032 321.786 1.00143.14 C
ATOM 21 C6 C A1229 226.922 -42.231 321.770 1.00142.61 C
ATOM 22 P A A1230 225.742 -46.524 318.411 1.00137.71 P
ATOM 23 OP1 A A1230 225.851 -47.794 317.661 1.00136.99 O
ATOM 24 OP2 A A1230 225.769 -45.233 317.652 1.00137.52 O
ATOM 25 O5' A A1230 224.469 -46.572 319.357 1.00138.76 O
TER
ATOM 1 O3' A B1238 226.158 -42.770 311.006 1.00 93.72 O
ATOM 2 P G B1239 227.064 -42.972 312.343 1.00121.16 P
ATOM 3 OP1 G B1239 228.262 -43.774 311.953 1.00120.39 O
ATOM 4 OP2 G B1239 226.155 -43.516 313.391 1.00121.96 O
ATOM 5 O5' G B1239 227.499 -41.490 312.741 1.00121.50 O
ATOM 6 C5' G B1239 227.087 -40.910 313.974 1.00122.45 C
ATOM 7 C4' G B1239 226.491 -39.541 313.767 1.00122.84 C
ATOM 8 O4' G B1239 225.606 -39.224 314.878 1.00123.88 O
ATOM 9 C3' G B1239 227.492 -38.392 313.679 1.00122.66 C
ATOM 10 O3' G B1239 226.979 -37.412 312.783 1.00122.55 O
ATOM 11 C2' G B1239 227.477 -37.829 315.098 1.00123.61 C
ATOM 12 O2' G B1239 227.882 -36.481 315.193 1.00123.82 O
ATOM 13 C1' G B1239 226.005 -38.001 315.466 1.00124.34 C
ATOM 14 N9 G B1239 225.729 -38.066 316.912 1.00125.29 N
ATOM 15 C8 G B1239 225.979 -39.094 317.806 1.00125.50 C
ATOM 16 N7 G B1239 225.572 -38.848 319.030 1.00126.46 N
ATOM 17 C5 G B1239 224.999 -37.582 318.943 1.00126.95 C
ATOM 18 C6 G B1239 224.383 -36.775 319.937 1.00128.03 C
ATOM 19 O6 G B1239 224.216 -37.027 321.136 1.00128.81 O
ATOM 20 N1 G B1239 223.941 -35.564 319.407 1.00128.19 N
ATOM 21 C2 G B1239 224.067 -35.170 318.094 1.00127.40 C
ATOM 22 N2 G B1239 223.578 -33.961 317.758 1.00127.70 N
ATOM 23 N3 G B1239 224.640 -35.912 317.162 1.00126.39 N
ATOM 24 C4 G B1239 225.078 -37.094 317.647 1.00126.23 C
ATOM 25 P C B1240 227.973 -36.452 311.972 1.00106.13 P
ATOM 26 OP1 C B1240 229.060 -37.316 311.425 1.00105.27 O
ATOM 27 OP2 C B1240 228.334 -35.331 312.875 1.00106.76 O
ATOM 28 O5' C B1240 227.046 -35.910 310.791 1.00105.91 O
TER
ATOM 2 P C A1229 228.514 -42.728 317.565 1.00139.39 P
ATOM 3 OP1 C A1229 228.806 -43.894 316.694 1.00138.55 O
ATOM 4 OP2 C A1229 227.324 -41.894 317.262 1.00139.82 O
ATOM 5 O5' C A1229 228.482 -43.195 319.083 1.00140.19 O
ATOM 6 C5' C A1229 229.301 -44.262 319.538 1.00139.94 C
ATOM 7 C4' C A1229 228.599 -45.066 320.602 1.00140.64 C
ATOM 8 O4' C A1229 228.581 -44.323 321.853 1.00141.57 O
ATOM 9 C3' C A1229 227.134 -45.377 320.332 1.00140.95 C
ATOM 10 O3' C A1229 226.956 -46.494 319.469 1.00140.28 O
ATOM 11 C2' C A1229 226.576 -45.585 321.733 1.00141.96 C
ATOM 12 O2' C A1229 226.915 -46.876 322.214 1.00141.84 O
ATOM 13 C1' C A1229 227.363 -44.546 322.533 1.00142.38 C
ATOM 14 N1 C A1229 226.637 -43.248 322.638 1.00143.03 N
ATOM 15 C2 C A1229 225.656 -43.026 323.616 1.00144.09 C
ATOM 16 O2 C A1229 225.387 -43.943 324.414 1.00144.48 O
ATOM 17 N3 C A1229 225.029 -41.810 323.654 1.00144.66 N
ATOM 18 C4 C A1229 225.334 -40.834 322.780 1.00144.22 C
ATOM 19 N4 C A1229 224.705 -39.655 322.837 1.00144.81 N
ATOM 20 C5 C A1229 226.321 -41.032 321.786 1.00143.14 C
ATOM 21 C6 C A1229 226.922 -42.231 321.770 1.00142.61 C
ATOM 22 P A A1230 225.742 -46.524 318.411 1.00137.71 P
ATOM 23 OP1 A A1230 225.851 -47.794 317.661 1.00136.99 O
ATOM 24 OP2 A A1230 225.769 -45.233 317.652 1.00137.52 O
ATOM 25 O5' A A1230 224.469 -46.572 319.357 1.00138.76 O
TER
ATOM 1 O3' A B1238 226.158 -42.770 311.006 1.00 93.72 O
ATOM 2 P G B1239 227.064 -42.972 312.343 1.00121.16 P
ATOM 3 OP1 G B1239 228.262 -43.774 311.953 1.00120.39 O
ATOM 4 OP2 G B1239 226.155 -43.516 313.391 1.00121.96 O
ATOM 5 O5' G B1239 227.499 -41.490 312.741 1.00121.50 O
ATOM 6 C5' G B1239 227.087 -40.910 313.974 1.00122.45 C
ATOM 7 C4' G B1239 226.491 -39.541 313.767 1.00122.84 C
ATOM 8 O4' G B1239 225.606 -39.224 314.878 1.00123.88 O
ATOM 9 C3' G B1239 227.492 -38.392 313.679 1.00122.66 C
ATOM 10 O3' G B1239 226.979 -37.412 312.783 1.00122.55 O
ATOM 11 C2' G B1239 227.477 -37.829 315.098 1.00123.61 C
ATOM 12 O2' G B1239 227.882 -36.481 315.193 1.00123.82 O
ATOM 13 C1' G B1239 226.005 -38.001 315.466 1.00124.34 C
ATOM 14 N9 G B1239 225.729 -38.066 316.912 1.00125.29 N
ATOM 15 C8 G B1239 225.979 -39.094 317.806 1.00125.50 C
ATOM 16 N7 G B1239 225.572 -38.848 319.030 1.00126.46 N
ATOM 17 C5 G B1239 224.999 -37.582 318.943 1.00126.95 C
ATOM 18 C6 G B1239 224.383 -36.775 319.937 1.00128.03 C
ATOM 19 O6 G B1239 224.216 -37.027 321.136 1.00128.81 O
ATOM 20 N1 G B1239 223.941 -35.564 319.407 1.00128.19 N
ATOM 21 C2 G B1239 224.067 -35.170 318.094 1.00127.40 C
ATOM 22 N2 G B1239 223.578 -33.961 317.758 1.00127.70 N
ATOM 23 N3 G B1239 224.640 -35.912 317.162 1.00126.39 N
ATOM 24 C4 G B1239 225.078 -37.094 317.647 1.00126.23 C
ATOM 25 P C B1240 227.973 -36.452 311.972 1.00106.13 P
ATOM 26 OP1 C B1240 229.060 -37.316 311.425 1.00105.27 O
ATOM 27 OP2 C B1240 228.334 -35.331 312.875 1.00106.76 O
ATOM 28 O5' C B1240 227.046 -35.910 310.791 1.00105.91 O
TER
Atoms:
C2: (225.656,-43.026,323.616)
OP1: (228.806,-43.894,316.694)
OP2: (227.324,-41.894,317.262)
C4: (225.334,-40.834,322.780)
O5': (228.482,-43.195,319.083)
C3': (227.134,-45.377,320.332)
C1': (227.363,-44.546,322.533)
O4': (228.581,-44.323,321.853)
C5': (229.301,-44.262,319.538)
P: (228.514,-42.728,317.565)
O2: (225.387,-43.943,324.414)
C4': (228.599,-45.066,320.602)
C2': (226.576,-45.585,321.733)
O2': (226.915,-46.876,322.214)
N1: (226.637,-43.248,322.638)
N3: (225.029,-41.810,323.654)
N4: (224.705,-39.655,322.837)
C6: (226.922,-42.231,321.770)
C5: (226.321,-41.032,321.786)
O3': (226.956,-46.494,319.469)
OP1: (228.806,-43.894,316.694)
OP2: (227.324,-41.894,317.262)
C4: (225.334,-40.834,322.780)
O5': (228.482,-43.195,319.083)
C3': (227.134,-45.377,320.332)
C1': (227.363,-44.546,322.533)
O4': (228.581,-44.323,321.853)
C5': (229.301,-44.262,319.538)
P: (228.514,-42.728,317.565)
O2: (225.387,-43.943,324.414)
C4': (228.599,-45.066,320.602)
C2': (226.576,-45.585,321.733)
O2': (226.915,-46.876,322.214)
N1: (226.637,-43.248,322.638)
N3: (225.029,-41.810,323.654)
N4: (224.705,-39.655,322.837)
C6: (226.922,-42.231,321.770)
C5: (226.321,-41.032,321.786)
O3': (226.956,-46.494,319.469)
OP1: (228.262,-43.774,311.953)
OP2: (226.155,-43.516,313.391)
C3': (227.492,-38.392,313.679)
C1': (226.005,-38.001,315.466)
C5': (227.087,-40.910,313.974)
O6: (224.216,-37.027,321.136)
O4': (225.606,-39.224,314.878)
C8: (225.979,-39.094,317.806)
C2: (224.067,-35.170,318.094)
C6: (224.383,-36.775,319.937)
C5: (224.999,-37.582,318.943)
C4: (225.078,-37.094,317.647)
P: (227.064,-42.972,312.343)
C4': (226.491,-39.541,313.767)
C2': (227.477,-37.829,315.098)
O2': (227.882,-36.481,315.193)
N1: (223.941,-35.564,319.407)
N2: (223.578,-33.961,317.758)
N3: (224.640,-35.912,317.162)
N7: (225.572,-38.848,319.030)
N9: (225.729,-38.066,316.912)
O5': (227.499,-41.490,312.741)
O3': (226.979,-37.412,312.783)
OP2: (226.155,-43.516,313.391)
C3': (227.492,-38.392,313.679)
C1': (226.005,-38.001,315.466)
C5': (227.087,-40.910,313.974)
O6: (224.216,-37.027,321.136)
O4': (225.606,-39.224,314.878)
C8: (225.979,-39.094,317.806)
C2: (224.067,-35.170,318.094)
C6: (224.383,-36.775,319.937)
C5: (224.999,-37.582,318.943)
C4: (225.078,-37.094,317.647)
P: (227.064,-42.972,312.343)
C4': (226.491,-39.541,313.767)
C2': (227.477,-37.829,315.098)
O2': (227.882,-36.481,315.193)
N1: (223.941,-35.564,319.407)
N2: (223.578,-33.961,317.758)
N3: (224.640,-35.912,317.162)
N7: (225.572,-38.848,319.030)
N9: (225.729,-38.066,316.912)
O5': (227.499,-41.490,312.741)
O3': (226.979,-37.412,312.783)
Image (generated by PyMOL):