Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02707:02728
Extra
PDB:
ATOM 1 O3' G A2706 79.357 194.706 118.116 1.00 57.67 O
ATOM 2 P C A2707 80.425 195.828 117.690 1.00 58.01 P
ATOM 3 OP1 C A2707 81.360 195.205 116.721 1.00 58.13 O
ATOM 4 OP2 C A2707 80.969 196.450 118.928 1.00 59.03 O
ATOM 5 O5' C A2707 79.546 196.897 116.901 1.00 58.12 O
ATOM 6 C5' C A2707 78.919 196.550 115.655 1.00 59.86 C
ATOM 7 C4' C A2707 78.084 197.700 115.146 1.00 62.64 C
ATOM 8 O4' C A2707 76.962 197.930 116.034 1.00 63.73 O
ATOM 9 C3' C A2707 78.780 199.046 115.059 1.00 63.23 C
ATOM 10 O3' C A2707 79.524 199.153 113.851 1.00 67.08 O
ATOM 11 C2' C A2707 77.604 200.011 115.089 1.00 63.04 C
ATOM 12 O2' C A2707 76.948 200.093 113.845 1.00 63.19 O
ATOM 13 C1' C A2707 76.666 199.316 116.077 1.00 63.89 C
ATOM 14 N1 C A2707 76.805 199.787 117.473 1.00 65.54 N
ATOM 15 C2 C A2707 76.110 200.942 117.874 1.00 65.03 C
ATOM 16 O2 C A2707 75.408 201.546 117.046 1.00 65.66 O
ATOM 17 N3 C A2707 76.223 201.366 119.153 1.00 64.94 N
ATOM 18 C4 C A2707 76.987 200.692 120.017 1.00 64.50 C
ATOM 19 N4 C A2707 77.058 201.141 121.270 1.00 64.04 N
ATOM 20 C5 C A2707 77.708 199.524 119.636 1.00 64.42 C
ATOM 21 C6 C A2707 77.591 199.112 118.369 1.00 65.01 C
ATOM 22 P G A2708 80.920 199.953 113.839 1.00 71.17 P
ATOM 23 OP1 G A2708 81.328 200.100 112.414 1.00 68.59 O
ATOM 24 OP2 G A2708 81.848 199.308 114.807 1.00 69.64 O
ATOM 25 O5' G A2708 80.540 201.395 114.403 1.00 72.61 O
TER
ATOM 1 O3' U B2727 76.793 203.257 129.299 1.00 69.71 O
ATOM 2 P U B2728 75.554 202.246 129.131 1.00 71.09 P
ATOM 3 OP1 U B2728 75.364 202.054 127.665 1.00 69.99 O
ATOM 4 OP2 U B2728 74.414 202.711 129.958 1.00 70.73 O
ATOM 5 O5' U B2728 76.103 200.890 129.761 1.00 69.21 O
ATOM 6 C5' U B2728 75.214 199.809 130.082 1.00 68.71 C
ATOM 7 C4' U B2728 75.872 198.482 129.775 1.00 68.88 C
ATOM 8 O4' U B2728 75.995 198.314 128.333 1.00 66.35 O
ATOM 9 C3' U B2728 77.277 198.274 130.340 1.00 69.31 C
ATOM 10 O3' U B2728 77.427 196.896 130.637 1.00 74.07 O
ATOM 11 C2' U B2728 78.163 198.591 129.140 1.00 67.17 C
ATOM 12 O2' U B2728 79.432 197.974 129.216 1.00 65.38 O
ATOM 13 C1' U B2728 77.330 197.977 128.019 1.00 65.66 C
ATOM 14 N1 U B2728 77.640 198.410 126.648 1.00 63.90 N
ATOM 15 C2 U B2728 78.546 197.645 125.924 1.00 62.50 C
ATOM 16 O2 U B2728 79.107 196.661 126.383 1.00 60.40 O
ATOM 17 N3 U B2728 78.770 198.076 124.641 1.00 61.08 N
ATOM 18 C4 U B2728 78.199 199.167 124.018 1.00 61.34 C
ATOM 19 O4 U B2728 78.467 199.397 122.839 1.00 60.84 O
ATOM 20 C5 U B2728 77.292 199.914 124.833 1.00 62.07 C
ATOM 21 C6 U B2728 77.050 199.522 126.088 1.00 63.63 C
ATOM 22 P A B2729 77.949 196.432 132.080 1.00 78.18 P
ATOM 23 OP1 A B2729 77.680 197.525 133.055 1.00 77.40 O
ATOM 24 OP2 A B2729 79.336 195.903 131.930 1.00 76.76 O
ATOM 25 O5' A B2729 76.978 195.217 132.414 1.00 78.70 O
TER
ATOM 2 P C A2707 80.425 195.828 117.690 1.00 58.01 P
ATOM 3 OP1 C A2707 81.360 195.205 116.721 1.00 58.13 O
ATOM 4 OP2 C A2707 80.969 196.450 118.928 1.00 59.03 O
ATOM 5 O5' C A2707 79.546 196.897 116.901 1.00 58.12 O
ATOM 6 C5' C A2707 78.919 196.550 115.655 1.00 59.86 C
ATOM 7 C4' C A2707 78.084 197.700 115.146 1.00 62.64 C
ATOM 8 O4' C A2707 76.962 197.930 116.034 1.00 63.73 O
ATOM 9 C3' C A2707 78.780 199.046 115.059 1.00 63.23 C
ATOM 10 O3' C A2707 79.524 199.153 113.851 1.00 67.08 O
ATOM 11 C2' C A2707 77.604 200.011 115.089 1.00 63.04 C
ATOM 12 O2' C A2707 76.948 200.093 113.845 1.00 63.19 O
ATOM 13 C1' C A2707 76.666 199.316 116.077 1.00 63.89 C
ATOM 14 N1 C A2707 76.805 199.787 117.473 1.00 65.54 N
ATOM 15 C2 C A2707 76.110 200.942 117.874 1.00 65.03 C
ATOM 16 O2 C A2707 75.408 201.546 117.046 1.00 65.66 O
ATOM 17 N3 C A2707 76.223 201.366 119.153 1.00 64.94 N
ATOM 18 C4 C A2707 76.987 200.692 120.017 1.00 64.50 C
ATOM 19 N4 C A2707 77.058 201.141 121.270 1.00 64.04 N
ATOM 20 C5 C A2707 77.708 199.524 119.636 1.00 64.42 C
ATOM 21 C6 C A2707 77.591 199.112 118.369 1.00 65.01 C
ATOM 22 P G A2708 80.920 199.953 113.839 1.00 71.17 P
ATOM 23 OP1 G A2708 81.328 200.100 112.414 1.00 68.59 O
ATOM 24 OP2 G A2708 81.848 199.308 114.807 1.00 69.64 O
ATOM 25 O5' G A2708 80.540 201.395 114.403 1.00 72.61 O
TER
ATOM 1 O3' U B2727 76.793 203.257 129.299 1.00 69.71 O
ATOM 2 P U B2728 75.554 202.246 129.131 1.00 71.09 P
ATOM 3 OP1 U B2728 75.364 202.054 127.665 1.00 69.99 O
ATOM 4 OP2 U B2728 74.414 202.711 129.958 1.00 70.73 O
ATOM 5 O5' U B2728 76.103 200.890 129.761 1.00 69.21 O
ATOM 6 C5' U B2728 75.214 199.809 130.082 1.00 68.71 C
ATOM 7 C4' U B2728 75.872 198.482 129.775 1.00 68.88 C
ATOM 8 O4' U B2728 75.995 198.314 128.333 1.00 66.35 O
ATOM 9 C3' U B2728 77.277 198.274 130.340 1.00 69.31 C
ATOM 10 O3' U B2728 77.427 196.896 130.637 1.00 74.07 O
ATOM 11 C2' U B2728 78.163 198.591 129.140 1.00 67.17 C
ATOM 12 O2' U B2728 79.432 197.974 129.216 1.00 65.38 O
ATOM 13 C1' U B2728 77.330 197.977 128.019 1.00 65.66 C
ATOM 14 N1 U B2728 77.640 198.410 126.648 1.00 63.90 N
ATOM 15 C2 U B2728 78.546 197.645 125.924 1.00 62.50 C
ATOM 16 O2 U B2728 79.107 196.661 126.383 1.00 60.40 O
ATOM 17 N3 U B2728 78.770 198.076 124.641 1.00 61.08 N
ATOM 18 C4 U B2728 78.199 199.167 124.018 1.00 61.34 C
ATOM 19 O4 U B2728 78.467 199.397 122.839 1.00 60.84 O
ATOM 20 C5 U B2728 77.292 199.914 124.833 1.00 62.07 C
ATOM 21 C6 U B2728 77.050 199.522 126.088 1.00 63.63 C
ATOM 22 P A B2729 77.949 196.432 132.080 1.00 78.18 P
ATOM 23 OP1 A B2729 77.680 197.525 133.055 1.00 77.40 O
ATOM 24 OP2 A B2729 79.336 195.903 131.930 1.00 76.76 O
ATOM 25 O5' A B2729 76.978 195.217 132.414 1.00 78.70 O
TER
Atoms:
C2: (76.110,200.942,117.874)
OP1: (81.360,195.205,116.721)
OP2: (80.969,196.450,118.928)
C4: (76.987,200.692,120.017)
O5': (79.546,196.897,116.901)
C3': (78.780,199.046,115.059)
C1': (76.666,199.316,116.077)
O4': (76.962,197.930,116.034)
C5': (78.919,196.550,115.655)
P: (80.425,195.828,117.690)
O2: (75.408,201.546,117.046)
C4': (78.084,197.700,115.146)
C2': (77.604,200.011,115.089)
O2': (76.948,200.093,113.845)
N1: (76.805,199.787,117.473)
N3: (76.223,201.366,119.153)
N4: (77.058,201.141,121.270)
C6: (77.591,199.112,118.369)
C5: (77.708,199.524,119.636)
O3': (79.524,199.153,113.851)
OP1: (81.360,195.205,116.721)
OP2: (80.969,196.450,118.928)
C4: (76.987,200.692,120.017)
O5': (79.546,196.897,116.901)
C3': (78.780,199.046,115.059)
C1': (76.666,199.316,116.077)
O4': (76.962,197.930,116.034)
C5': (78.919,196.550,115.655)
P: (80.425,195.828,117.690)
O2: (75.408,201.546,117.046)
C4': (78.084,197.700,115.146)
C2': (77.604,200.011,115.089)
O2': (76.948,200.093,113.845)
N1: (76.805,199.787,117.473)
N3: (76.223,201.366,119.153)
N4: (77.058,201.141,121.270)
C6: (77.591,199.112,118.369)
C5: (77.708,199.524,119.636)
O3': (79.524,199.153,113.851)
C4: (78.199,199.167,124.018)
N3: (78.770,198.076,124.641)
OP1: (75.364,202.054,127.665)
OP2: (74.414,202.711,129.958)
C2: (78.546,197.645,125.924)
C1': (77.330,197.977,128.019)
C3': (77.277,198.274,130.340)
O5': (76.103,200.890,129.761)
O4': (75.995,198.314,128.333)
C5': (75.214,199.809,130.082)
P: (75.554,202.246,129.131)
C4': (75.872,198.482,129.775)
C2': (78.163,198.591,129.140)
O2': (79.432,197.974,129.216)
N1: (77.640,198.410,126.648)
O4: (78.467,199.397,122.839)
O2: (79.107,196.661,126.383)
C6: (77.050,199.522,126.088)
C5: (77.292,199.914,124.833)
O3': (77.427,196.896,130.637)
N3: (78.770,198.076,124.641)
OP1: (75.364,202.054,127.665)
OP2: (74.414,202.711,129.958)
C2: (78.546,197.645,125.924)
C1': (77.330,197.977,128.019)
C3': (77.277,198.274,130.340)
O5': (76.103,200.890,129.761)
O4': (75.995,198.314,128.333)
C5': (75.214,199.809,130.082)
P: (75.554,202.246,129.131)
C4': (75.872,198.482,129.775)
C2': (78.163,198.591,129.140)
O2': (79.432,197.974,129.216)
N1: (77.640,198.410,126.648)
O4: (78.467,199.397,122.839)
O2: (79.107,196.661,126.383)
C6: (77.050,199.522,126.088)
C5: (77.292,199.914,124.833)
O3': (77.427,196.896,130.637)
Image (generated by PyMOL):