ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1764:1765

Extra

PDB:
ATOM 1 O3' U A 763 21.470 12.999 101.457 1.00 42.46 O
ATOM 2 P A A 764 20.166 13.001 102.425 1.00 40.62 P
ATOM 3 OP1 A A 764 19.114 13.670 101.654 1.00 40.65 O
ATOM 4 OP2 A A 764 20.556 13.564 103.760 1.00 40.99 O
ATOM 5 O5' A A 764 19.840 11.464 102.580 1.00 40.45 O
ATOM 6 C5' A A 764 19.427 10.702 101.479 1.00 40.13 C
ATOM 7 C4' A A 764 18.984 9.359 101.928 1.00 40.08 C
ATOM 8 O4' A A 764 20.134 8.544 102.247 1.00 39.95 O
ATOM 9 C3' A A 764 18.181 9.341 103.198 1.00 40.44 C
ATOM 10 O3' A A 764 16.836 9.711 102.982 1.00 40.56 O
ATOM 11 C2' A A 764 18.357 7.903 103.640 1.00 40.33 C
ATOM 12 O2' A A 764 17.610 7.039 102.791 1.00 40.10 O
ATOM 13 C1' A A 764 19.820 7.684 103.313 1.00 40.11 C
ATOM 14 N9 A A 764 20.742 7.980 104.427 1.00 40.33 N
ATOM 15 C8 A A 764 21.392 9.157 104.632 1.00 40.48 C
ATOM 16 N7 A A 764 22.247 9.136 105.609 1.00 40.65 N
ATOM 17 C5 A A 764 22.192 7.841 106.095 1.00 40.61 C
ATOM 18 C6 A A 764 22.889 7.179 107.146 1.00 40.75 C
ATOM 19 N6 A A 764 23.808 7.707 107.962 1.00 40.96 N
ATOM 20 N1 A A 764 22.603 5.895 107.344 1.00 40.66 N
ATOM 21 C2 A A 764 21.673 5.335 106.540 1.00 40.46 C
ATOM 22 N3 A A 764 20.952 5.834 105.527 1.00 40.32 N
ATOM 23 C4 A A 764 21.272 7.122 105.354 1.00 40.41 C
ATOM 24 P U A 765 16.018 10.590 104.062 1.00 40.50 P
ATOM 25 OP1 U A 765 14.659 10.838 103.453 1.00 40.53 O
ATOM 26 OP2 U A 765 16.875 11.756 104.427 1.00 40.67 O
ATOM 27 O5' U A 765 15.866 9.619 105.307 1.00 40.67 O
TER

ATOM 1 O3' A B 764 16.836 9.711 102.982 1.00 40.56 O
ATOM 2 P U B 765 16.018 10.590 104.062 1.00 40.50 P
ATOM 3 OP1 U B 765 14.659 10.838 103.453 1.00 40.53 O
ATOM 4 OP2 U B 765 16.875 11.756 104.427 1.00 40.67 O
ATOM 5 O5' U B 765 15.866 9.619 105.307 1.00 40.67 O
ATOM 6 C5' U B 765 14.814 8.692 105.323 1.00 40.65 C
ATOM 7 C4' U B 765 14.962 7.683 106.416 1.00 40.77 C
ATOM 8 O4' U B 765 16.257 7.029 106.338 1.00 40.54 O
ATOM 9 C3' U B 765 14.911 8.223 107.815 1.00 41.19 C
ATOM 10 O3' U B 765 13.602 8.519 108.230 1.00 41.47 O
ATOM 11 C2' U B 765 15.575 7.105 108.598 1.00 41.18 C
ATOM 12 O2' U B 765 14.708 6.013 108.740 1.00 41.18 O
ATOM 13 C1' U B 765 16.686 6.699 107.632 1.00 40.78 C
ATOM 14 N1 U B 765 17.914 7.435 107.918 1.00 40.84 N
ATOM 15 C2 U B 765 18.740 6.851 108.891 1.00 40.95 C
ATOM 16 O2 U B 765 18.555 5.796 109.457 1.00 40.99 O
ATOM 17 N3 U B 765 19.869 7.518 109.187 1.00 41.02 N
ATOM 18 C4 U B 765 20.222 8.694 108.647 1.00 41.00 C
ATOM 19 O4 U B 765 21.256 9.105 109.099 1.00 41.09 O
ATOM 20 C5 U B 765 19.340 9.272 107.669 1.00 40.89 C
ATOM 21 C6 U B 765 18.202 8.642 107.335 1.00 40.82 C
ATOM 22 P G B 766 13.325 9.694 109.296 1.00 45.73 P
ATOM 23 OP1 G B 766 11.895 10.018 109.218 1.00 45.91 O
ATOM 24 OP2 G B 766 14.311 10.780 109.061 1.00 45.72 O
ATOM 25 O5' G B 766 13.611 8.970 110.660 1.00 45.96 O
TER

Atoms:
OP1: (19.114,13.670,101.654)
OP2: (20.556,13.564,103.760)
C3': (18.181,9.341,103.198)
C1': (19.820,7.684,103.313)
C5': (19.427,10.702,101.479)
O4': (20.134,8.544,102.247)
C8: (21.392,9.157,104.632)
O2': (17.610,7.039,102.791)
C6: (22.889,7.179,107.146)
C5: (22.192,7.841,106.095)
C4: (21.272,7.122,105.354)
P: (20.166,13.001,102.425)
C4': (18.984,9.359,101.928)
C2': (18.357,7.903,103.640)
C2: (21.673,5.335,106.540)
N1: (22.603,5.895,107.344)
N3: (20.952,5.834,105.527)
N6: (23.808,7.707,107.962)
N7: (22.247,9.136,105.609)
N9: (20.742,7.980,104.427)
O5': (19.840,11.464,102.580)
O3': (16.836,9.711,102.982)
C4: (20.222,8.694,108.647)
N3: (19.869,7.518,109.187)
OP1: (14.659,10.838,103.453)
OP2: (16.875,11.756,104.427)
C2: (18.740,6.851,108.891)
C1': (16.686,6.699,107.632)
C3': (14.911,8.223,107.815)
O5': (15.866,9.619,105.307)
O4': (16.257,7.029,106.338)
C5': (14.814,8.692,105.323)
P: (16.018,10.590,104.062)
C4': (14.962,7.683,106.416)
C2': (15.575,7.105,108.598)
O2': (14.708,6.013,108.740)
N1: (17.914,7.435,107.918)
O4: (21.256,9.105,109.099)
O2: (18.555,5.796,109.457)
C6: (18.202,8.642,107.335)
C5: (19.340,9.272,107.669)
O3': (13.602,8.519,108.230)
Image (generated by PyMOL):
PyMOL image
show in jmol