ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01077:01079

Extra

PDB:
ATOM 1 O3' A A1076 36.346 105.326 144.079 1.00 42.93 O
ATOM 2 P A A1077 37.853 105.597 144.556 1.00 45.54 P
ATOM 3 OP1 A A1077 38.217 104.584 145.572 1.00 45.75 O
ATOM 4 OP2 A A1077 37.978 107.041 144.885 1.00 44.80 O
ATOM 5 O5' A A1077 38.710 105.283 143.250 1.00 45.79 O
ATOM 6 C5' A A1077 38.611 106.127 142.092 1.00 45.53 C
ATOM 7 C4' A A1077 39.373 105.530 140.935 1.00 45.02 C
ATOM 8 O4' A A1077 38.798 104.235 140.575 1.00 45.18 O
ATOM 9 C3' A A1077 39.280 106.341 139.652 1.00 43.96 C
ATOM 10 O3' A A1077 40.102 107.485 139.568 1.00 43.19 O
ATOM 11 C2' A A1077 39.427 105.278 138.581 1.00 44.36 C
ATOM 12 O2' A A1077 40.751 104.820 138.415 1.00 44.14 O
ATOM 13 C1' A A1077 38.519 104.206 139.181 1.00 44.68 C
ATOM 14 N9 A A1077 37.119 104.607 139.010 1.00 45.50 N
ATOM 15 C8 A A1077 36.614 105.892 138.940 1.00 45.57 C
ATOM 16 N7 A A1077 35.322 105.952 138.785 1.00 44.91 N
ATOM 17 C5 A A1077 34.940 104.628 138.756 1.00 45.09 C
ATOM 18 C6 A A1077 33.697 104.041 138.623 1.00 46.61 C
ATOM 19 N6 A A1077 32.574 104.738 138.506 1.00 44.42 N
ATOM 20 N1 A A1077 33.640 102.693 138.619 1.00 50.91 N
ATOM 21 C2 A A1077 34.791 101.999 138.750 1.00 51.17 C
ATOM 22 N3 A A1077 36.034 102.447 138.894 1.00 47.02 N
ATOM 23 C4 A A1077 36.038 103.786 138.888 1.00 45.54 C
ATOM 24 P G A1078 39.404 108.914 139.330 1.00 43.63 P
ATOM 25 OP1 G A1078 40.472 109.922 139.149 1.00 43.63 O
ATOM 26 OP2 G A1078 38.372 109.119 140.378 1.00 43.90 O
ATOM 27 O5' G A1078 38.670 108.735 137.932 1.00 41.55 O
TER

ATOM 1 O3' G B1078 37.542 108.447 134.174 1.00 40.61 O
ATOM 2 P U B1079 39.020 107.953 133.833 1.00 43.21 P
ATOM 3 OP1 U B1079 39.974 108.885 134.468 1.00 44.68 O
ATOM 4 OP2 U B1079 39.072 107.729 132.365 1.00 42.68 O
ATOM 5 O5' U B1079 39.128 106.544 134.555 1.00 41.97 O
ATOM 6 C5' U B1079 38.541 105.419 133.934 1.00 41.34 C
ATOM 7 C4' U B1079 39.155 104.140 134.413 1.00 40.71 C
ATOM 8 O4' U B1079 38.539 103.749 135.665 1.00 41.33 O
ATOM 9 C3' U B1079 38.795 103.060 133.415 1.00 42.84 C
ATOM 10 O3' U B1079 39.877 102.877 132.511 1.00 43.65 O
ATOM 11 C2' U B1079 38.398 101.857 134.260 1.00 41.72 C
ATOM 12 O2' U B1079 39.475 101.025 134.625 1.00 44.23 O
ATOM 13 C1' U B1079 37.807 102.546 135.491 1.00 41.86 C
ATOM 14 N1 U B1079 36.374 102.882 135.400 1.00 40.63 N
ATOM 15 C2 U B1079 35.458 101.839 135.320 1.00 40.87 C
ATOM 16 O2 U B1079 35.780 100.666 135.338 1.00 42.09 O
ATOM 17 N3 U B1079 34.143 102.227 135.225 1.00 40.78 N
ATOM 18 C4 U B1079 33.654 103.519 135.207 1.00 40.64 C
ATOM 19 O4 U B1079 32.449 103.705 135.044 1.00 38.26 O
ATOM 20 C5 U B1079 34.655 104.539 135.312 1.00 40.36 C
ATOM 21 C6 U B1079 35.945 104.196 135.398 1.00 40.38 C
ATOM 22 P G B1080 39.814 103.544 131.050 1.00 42.81 P
ATOM 23 OP1 G B1080 40.953 102.956 130.303 1.00 43.18 O
ATOM 24 OP2 G B1080 39.712 105.021 131.180 1.00 40.91 O
ATOM 25 O5' G B1080 38.440 102.994 130.457 1.00 40.30 O
TER

Atoms:
OP1: (38.217,104.584,145.572)
OP2: (37.978,107.041,144.885)
C3': (39.280,106.341,139.652)
C1': (38.519,104.206,139.181)
C5': (38.611,106.127,142.092)
O4': (38.798,104.235,140.575)
C8: (36.614,105.892,138.940)
O2': (40.751,104.820,138.415)
C6: (33.697,104.041,138.623)
C5: (34.940,104.628,138.756)
C4: (36.038,103.786,138.888)
P: (37.853,105.597,144.556)
C4': (39.373,105.530,140.935)
C2': (39.427,105.278,138.581)
C2: (34.791,101.999,138.750)
N1: (33.640,102.693,138.619)
N3: (36.034,102.447,138.894)
N6: (32.574,104.738,138.506)
N7: (35.322,105.952,138.785)
N9: (37.119,104.607,139.010)
O5': (38.710,105.283,143.250)
O3': (40.102,107.485,139.568)
C4: (33.654,103.519,135.207)
N3: (34.143,102.227,135.225)
OP1: (39.974,108.885,134.468)
OP2: (39.072,107.729,132.365)
C2: (35.458,101.839,135.320)
C1': (37.807,102.546,135.491)
C3': (38.795,103.060,133.415)
O5': (39.128,106.544,134.555)
O4': (38.539,103.749,135.665)
C5': (38.541,105.419,133.934)
P: (39.020,107.953,133.833)
C4': (39.155,104.140,134.413)
C2': (38.398,101.857,134.260)
O2': (39.475,101.025,134.625)
N1: (36.374,102.882,135.400)
O4: (32.449,103.705,135.044)
O2: (35.780,100.666,135.338)
C6: (35.945,104.196,135.398)
C5: (34.655,104.539,135.312)
O3': (39.877,102.877,132.511)
Image (generated by PyMOL):
PyMOL image
show in jmol