Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:953:954
Extra
PDB:
ATOM 1 O3' G A 52 71.891 2.370 108.853 1.00 86.34 O
ATOM 2 P A A 53 70.418 2.678 109.410 1.00 86.68 P
ATOM 3 OP1 A A 53 70.307 2.066 110.760 1.00 87.56 O
ATOM 4 OP2 A A 53 69.429 2.318 108.354 1.00 85.78 O
ATOM 5 O5' A A 53 70.408 4.260 109.594 1.00 85.95 O
ATOM 6 C5' A A 53 71.312 4.903 110.514 1.00 83.16 C
ATOM 7 C4' A A 53 71.064 6.394 110.540 1.00 82.27 C
ATOM 8 O4' A A 53 71.392 6.978 109.250 1.00 81.96 O
ATOM 9 C3' A A 53 69.630 6.833 110.774 1.00 81.22 C
ATOM 10 O3' A A 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 11 C2' A A 53 69.650 8.254 110.225 1.00 80.72 C
ATOM 12 O2' A A 53 70.292 9.167 111.094 1.00 80.69 O
ATOM 13 C1' A A 53 70.537 8.082 108.993 1.00 79.83 C
ATOM 14 N9 A A 53 69.780 7.816 107.767 1.00 79.35 N
ATOM 15 C8 A A 53 69.552 6.610 107.147 1.00 78.70 C
ATOM 16 N7 A A 53 68.837 6.704 106.050 1.00 78.56 N
ATOM 17 C5 A A 53 68.572 8.063 105.940 1.00 78.68 C
ATOM 18 C6 A A 53 67.854 8.818 104.988 1.00 78.15 C
ATOM 19 N6 A A 53 67.248 8.290 103.920 1.00 76.67 N
ATOM 20 N1 A A 53 67.780 10.154 105.175 1.00 77.91 N
ATOM 21 C2 A A 53 68.386 10.688 106.246 1.00 77.92 C
ATOM 22 N3 A A 53 69.088 10.088 107.205 1.00 78.84 N
ATOM 23 C4 A A 53 69.145 8.760 106.993 1.00 79.39 C
ATOM 24 P U A 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 25 OP1 U A 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 26 OP2 U A 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 27 O5' U A 54 67.187 8.152 112.428 1.00 82.68 O
TER
ATOM 1 O3' A B 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 2 P U B 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 3 OP1 U B 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 4 OP2 U B 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 5 O5' U B 54 67.187 8.152 112.428 1.00 82.68 O
ATOM 6 C5' U B 54 67.994 9.257 112.875 1.00 82.56 C
ATOM 7 C4' U B 54 67.345 10.580 112.540 1.00 80.64 C
ATOM 8 O4' U B 54 67.276 10.767 111.097 1.00 80.36 O
ATOM 9 C3' U B 54 65.941 10.819 113.080 1.00 78.99 C
ATOM 10 O3' U B 54 65.872 12.147 113.561 1.00 77.61 O
ATOM 11 C2' U B 54 65.061 10.654 111.843 1.00 79.96 C
ATOM 12 O2' U B 54 63.869 11.413 111.913 1.00 81.19 O
ATOM 13 C1' U B 54 65.976 11.194 110.745 1.00 79.97 C
ATOM 14 N1 U B 54 65.671 10.724 109.381 1.00 78.81 N
ATOM 15 C2 U B 54 65.616 11.677 108.371 1.00 77.74 C
ATOM 16 O2 U B 54 65.828 12.862 108.562 1.00 77.15 O
ATOM 17 N3 U B 54 65.302 11.189 107.126 1.00 76.58 N
ATOM 18 C4 U B 54 65.046 9.879 106.786 1.00 77.43 C
ATOM 19 O4 U B 54 64.741 9.603 105.622 1.00 76.34 O
ATOM 20 C5 U B 54 65.135 8.952 107.875 1.00 77.95 C
ATOM 21 C6 U B 54 65.437 9.394 109.103 1.00 78.45 C
ATOM 22 P A B 55 66.292 12.457 115.080 1.00 77.79 P
ATOM 23 OP1 A B 55 66.080 11.212 115.866 1.00 78.15 O
ATOM 24 OP2 A B 55 65.623 13.715 115.507 1.00 77.09 O
ATOM 25 O5' A B 55 67.863 12.719 114.999 1.00 74.73 O
TER
ATOM 2 P A A 53 70.418 2.678 109.410 1.00 86.68 P
ATOM 3 OP1 A A 53 70.307 2.066 110.760 1.00 87.56 O
ATOM 4 OP2 A A 53 69.429 2.318 108.354 1.00 85.78 O
ATOM 5 O5' A A 53 70.408 4.260 109.594 1.00 85.95 O
ATOM 6 C5' A A 53 71.312 4.903 110.514 1.00 83.16 C
ATOM 7 C4' A A 53 71.064 6.394 110.540 1.00 82.27 C
ATOM 8 O4' A A 53 71.392 6.978 109.250 1.00 81.96 O
ATOM 9 C3' A A 53 69.630 6.833 110.774 1.00 81.22 C
ATOM 10 O3' A A 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 11 C2' A A 53 69.650 8.254 110.225 1.00 80.72 C
ATOM 12 O2' A A 53 70.292 9.167 111.094 1.00 80.69 O
ATOM 13 C1' A A 53 70.537 8.082 108.993 1.00 79.83 C
ATOM 14 N9 A A 53 69.780 7.816 107.767 1.00 79.35 N
ATOM 15 C8 A A 53 69.552 6.610 107.147 1.00 78.70 C
ATOM 16 N7 A A 53 68.837 6.704 106.050 1.00 78.56 N
ATOM 17 C5 A A 53 68.572 8.063 105.940 1.00 78.68 C
ATOM 18 C6 A A 53 67.854 8.818 104.988 1.00 78.15 C
ATOM 19 N6 A A 53 67.248 8.290 103.920 1.00 76.67 N
ATOM 20 N1 A A 53 67.780 10.154 105.175 1.00 77.91 N
ATOM 21 C2 A A 53 68.386 10.688 106.246 1.00 77.92 C
ATOM 22 N3 A A 53 69.088 10.088 107.205 1.00 78.84 N
ATOM 23 C4 A A 53 69.145 8.760 106.993 1.00 79.39 C
ATOM 24 P U A 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 25 OP1 U A 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 26 OP2 U A 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 27 O5' U A 54 67.187 8.152 112.428 1.00 82.68 O
TER
ATOM 1 O3' A B 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 2 P U B 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 3 OP1 U B 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 4 OP2 U B 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 5 O5' U B 54 67.187 8.152 112.428 1.00 82.68 O
ATOM 6 C5' U B 54 67.994 9.257 112.875 1.00 82.56 C
ATOM 7 C4' U B 54 67.345 10.580 112.540 1.00 80.64 C
ATOM 8 O4' U B 54 67.276 10.767 111.097 1.00 80.36 O
ATOM 9 C3' U B 54 65.941 10.819 113.080 1.00 78.99 C
ATOM 10 O3' U B 54 65.872 12.147 113.561 1.00 77.61 O
ATOM 11 C2' U B 54 65.061 10.654 111.843 1.00 79.96 C
ATOM 12 O2' U B 54 63.869 11.413 111.913 1.00 81.19 O
ATOM 13 C1' U B 54 65.976 11.194 110.745 1.00 79.97 C
ATOM 14 N1 U B 54 65.671 10.724 109.381 1.00 78.81 N
ATOM 15 C2 U B 54 65.616 11.677 108.371 1.00 77.74 C
ATOM 16 O2 U B 54 65.828 12.862 108.562 1.00 77.15 O
ATOM 17 N3 U B 54 65.302 11.189 107.126 1.00 76.58 N
ATOM 18 C4 U B 54 65.046 9.879 106.786 1.00 77.43 C
ATOM 19 O4 U B 54 64.741 9.603 105.622 1.00 76.34 O
ATOM 20 C5 U B 54 65.135 8.952 107.875 1.00 77.95 C
ATOM 21 C6 U B 54 65.437 9.394 109.103 1.00 78.45 C
ATOM 22 P A B 55 66.292 12.457 115.080 1.00 77.79 P
ATOM 23 OP1 A B 55 66.080 11.212 115.866 1.00 78.15 O
ATOM 24 OP2 A B 55 65.623 13.715 115.507 1.00 77.09 O
ATOM 25 O5' A B 55 67.863 12.719 114.999 1.00 74.73 O
TER
Atoms:
OP1: (70.307,2.066,110.760)
OP2: (69.429,2.318,108.354)
C3': (69.630,6.833,110.774)
C1': (70.537,8.082,108.993)
C5': (71.312,4.903,110.514)
O4': (71.392,6.978,109.250)
C8: (69.552,6.610,107.147)
O2': (70.292,9.167,111.094)
C6: (67.854,8.818,104.988)
C5: (68.572,8.063,105.940)
C4: (69.145,8.760,106.993)
P: (70.418,2.678,109.410)
C4': (71.064,6.394,110.540)
C2': (69.650,8.254,110.225)
C2: (68.386,10.688,106.246)
N1: (67.780,10.154,105.175)
N3: (69.088,10.088,107.205)
N6: (67.248,8.290,103.920)
N7: (68.837,6.704,106.050)
N9: (69.780,7.816,107.767)
O5': (70.408,4.260,109.594)
O3': (69.279,6.767,112.152)
OP2: (69.429,2.318,108.354)
C3': (69.630,6.833,110.774)
C1': (70.537,8.082,108.993)
C5': (71.312,4.903,110.514)
O4': (71.392,6.978,109.250)
C8: (69.552,6.610,107.147)
O2': (70.292,9.167,111.094)
C6: (67.854,8.818,104.988)
C5: (68.572,8.063,105.940)
C4: (69.145,8.760,106.993)
P: (70.418,2.678,109.410)
C4': (71.064,6.394,110.540)
C2': (69.650,8.254,110.225)
C2: (68.386,10.688,106.246)
N1: (67.780,10.154,105.175)
N3: (69.088,10.088,107.205)
N6: (67.248,8.290,103.920)
N7: (68.837,6.704,106.050)
N9: (69.780,7.816,107.767)
O5': (70.408,4.260,109.594)
O3': (69.279,6.767,112.152)
C4: (65.046,9.879,106.786)
N3: (65.302,11.189,107.126)
OP1: (67.705,6.311,114.017)
OP2: (67.010,5.806,111.592)
C2: (65.616,11.677,108.371)
C1': (65.976,11.194,110.745)
C3': (65.941,10.819,113.080)
O5': (67.187,8.152,112.428)
O4': (67.276,10.767,111.097)
C5': (67.994,9.257,112.875)
P: (67.729,6.662,112.576)
C4': (67.345,10.580,112.540)
C2': (65.061,10.654,111.843)
O2': (63.869,11.413,111.913)
N1: (65.671,10.724,109.381)
O4: (64.741,9.603,105.622)
O2: (65.828,12.862,108.562)
C6: (65.437,9.394,109.103)
C5: (65.135,8.952,107.875)
O3': (65.872,12.147,113.561)
N3: (65.302,11.189,107.126)
OP1: (67.705,6.311,114.017)
OP2: (67.010,5.806,111.592)
C2: (65.616,11.677,108.371)
C1': (65.976,11.194,110.745)
C3': (65.941,10.819,113.080)
O5': (67.187,8.152,112.428)
O4': (67.276,10.767,111.097)
C5': (67.994,9.257,112.875)
P: (67.729,6.662,112.576)
C4': (67.345,10.580,112.540)
C2': (65.061,10.654,111.843)
O2': (63.869,11.413,111.913)
N1: (65.671,10.724,109.381)
O4: (64.741,9.603,105.622)
O2: (65.828,12.862,108.562)
C6: (65.437,9.394,109.103)
C5: (65.135,8.952,107.875)
O3': (65.872,12.147,113.561)
Image (generated by PyMOL):