Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDI:S5:S7
Extra
PDB:
ATOM 1 O3' G A 4 -11.261 102.930 -4.973 0.70 37.16 O
ATOM 2 P A A 5 -11.647 104.401 -4.435 0.70 39.81 P
ATOM 3 OP1 A A 5 -12.756 104.978 -5.241 0.70 40.02 O
ATOM 4 OP2 A A 5 -10.370 105.199 -4.268 0.70 41.75 O
ATOM 5 O5' A A 5 -12.204 104.161 -2.959 0.70 41.85 O
ATOM 6 C5' A A 5 -13.123 103.081 -2.686 0.70 46.12 C
ATOM 7 C4' A A 5 -13.103 102.718 -1.215 0.70 48.68 C
ATOM 8 O4' A A 5 -11.774 102.266 -0.824 0.70 49.11 O
ATOM 9 C3' A A 5 -13.425 103.857 -0.264 0.70 50.52 C
ATOM 10 O3' A A 5 -14.832 103.892 -0.054 0.70 54.89 O
ATOM 11 C2' A A 5 -12.745 103.434 1.040 0.70 48.89 C
ATOM 12 O2' A A 5 -13.577 102.603 1.843 0.70 48.78 O
ATOM 13 C1' A A 5 -11.540 102.623 0.532 0.70 48.14 C
ATOM 14 N9 A A 5 -10.264 103.348 0.629 0.70 46.18 N
ATOM 15 C8 A A 5 -9.444 103.796 -0.358 0.70 45.46 C
ATOM 16 N7 A A 5 -8.378 104.425 0.101 0.70 45.55 N
ATOM 17 C5 A A 5 -8.529 104.378 1.473 0.70 45.64 C
ATOM 18 C6 A A 5 -7.738 104.864 2.560 0.70 45.82 C
ATOM 19 N6 A A 5 -6.585 105.554 2.381 0.70 46.02 N
ATOM 20 N1 A A 5 -8.176 104.639 3.817 0.70 45.93 N
ATOM 21 C2 A A 5 -9.309 103.962 3.990 0.70 45.76 C
ATOM 22 N3 A A 5 -10.144 103.457 3.061 0.70 45.66 N
ATOM 23 C4 A A 5 -9.694 103.703 1.826 0.70 45.57 C
ATOM 24 P U A 6 -15.525 105.230 0.520 0.70 57.14 P
ATOM 25 OP1 U A 6 -17.012 105.033 0.440 0.70 57.56 O
ATOM 26 OP2 U A 6 -14.846 106.454 -0.123 0.70 57.25 O
ATOM 27 O5' U A 6 -15.205 105.260 2.072 0.70 55.90 O
TER
ATOM 1 O3' U B 6 -15.735 105.928 6.394 0.70 54.29 O
ATOM 2 P U B 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 3 OP1 U B 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 4 OP2 U B 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 5 O5' U B 7 -13.364 106.808 6.619 0.70 53.14 O
ATOM 6 C5' U B 7 -12.613 105.801 7.338 0.70 49.52 C
ATOM 7 C4' U B 7 -11.115 106.037 7.214 0.70 46.89 C
ATOM 8 O4' U B 7 -10.703 105.803 5.841 0.70 45.67 O
ATOM 9 C3' U B 7 -10.647 107.447 7.567 0.70 45.90 C
ATOM 10 O3' U B 7 -9.330 107.367 8.161 0.70 45.48 O
ATOM 11 C2' U B 7 -10.526 108.136 6.205 0.70 45.32 C
ATOM 12 O2' U B 7 -9.548 109.167 6.214 0.70 47.63 O
ATOM 13 C1' U B 7 -10.088 106.964 5.296 0.70 43.79 C
ATOM 14 N1 U B 7 -10.479 107.050 3.884 0.70 40.92 N
ATOM 15 C2 U B 7 -9.554 107.563 2.968 0.70 39.81 C
ATOM 16 O2 U B 7 -8.469 108.021 3.337 0.70 39.60 O
ATOM 17 N3 U B 7 -9.951 107.552 1.656 0.70 38.82 N
ATOM 18 C4 U B 7 -11.154 107.079 1.155 0.70 38.88 C
ATOM 19 O4 U B 7 -11.356 107.116 -0.075 0.70 39.29 O
ATOM 20 C5 U B 7 -12.070 106.587 2.142 0.70 38.30 C
ATOM 21 C6 U B 7 -11.712 106.582 3.440 0.70 39.47 C
ATOM 22 P A B 8 -9.171 107.122 9.751 0.70 43.19 P
ATOM 23 OP1 A B 8 -10.208 106.134 10.231 0.70 45.38 O
ATOM 24 OP2 A B 8 -9.053 108.442 10.441 0.70 43.78 O
ATOM 25 O5' A B 8 -7.714 106.474 9.848 0.70 42.99 O
TER
ATOM 2 P A A 5 -11.647 104.401 -4.435 0.70 39.81 P
ATOM 3 OP1 A A 5 -12.756 104.978 -5.241 0.70 40.02 O
ATOM 4 OP2 A A 5 -10.370 105.199 -4.268 0.70 41.75 O
ATOM 5 O5' A A 5 -12.204 104.161 -2.959 0.70 41.85 O
ATOM 6 C5' A A 5 -13.123 103.081 -2.686 0.70 46.12 C
ATOM 7 C4' A A 5 -13.103 102.718 -1.215 0.70 48.68 C
ATOM 8 O4' A A 5 -11.774 102.266 -0.824 0.70 49.11 O
ATOM 9 C3' A A 5 -13.425 103.857 -0.264 0.70 50.52 C
ATOM 10 O3' A A 5 -14.832 103.892 -0.054 0.70 54.89 O
ATOM 11 C2' A A 5 -12.745 103.434 1.040 0.70 48.89 C
ATOM 12 O2' A A 5 -13.577 102.603 1.843 0.70 48.78 O
ATOM 13 C1' A A 5 -11.540 102.623 0.532 0.70 48.14 C
ATOM 14 N9 A A 5 -10.264 103.348 0.629 0.70 46.18 N
ATOM 15 C8 A A 5 -9.444 103.796 -0.358 0.70 45.46 C
ATOM 16 N7 A A 5 -8.378 104.425 0.101 0.70 45.55 N
ATOM 17 C5 A A 5 -8.529 104.378 1.473 0.70 45.64 C
ATOM 18 C6 A A 5 -7.738 104.864 2.560 0.70 45.82 C
ATOM 19 N6 A A 5 -6.585 105.554 2.381 0.70 46.02 N
ATOM 20 N1 A A 5 -8.176 104.639 3.817 0.70 45.93 N
ATOM 21 C2 A A 5 -9.309 103.962 3.990 0.70 45.76 C
ATOM 22 N3 A A 5 -10.144 103.457 3.061 0.70 45.66 N
ATOM 23 C4 A A 5 -9.694 103.703 1.826 0.70 45.57 C
ATOM 24 P U A 6 -15.525 105.230 0.520 0.70 57.14 P
ATOM 25 OP1 U A 6 -17.012 105.033 0.440 0.70 57.56 O
ATOM 26 OP2 U A 6 -14.846 106.454 -0.123 0.70 57.25 O
ATOM 27 O5' U A 6 -15.205 105.260 2.072 0.70 55.90 O
TER
ATOM 1 O3' U B 6 -15.735 105.928 6.394 0.70 54.29 O
ATOM 2 P U B 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 3 OP1 U B 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 4 OP2 U B 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 5 O5' U B 7 -13.364 106.808 6.619 0.70 53.14 O
ATOM 6 C5' U B 7 -12.613 105.801 7.338 0.70 49.52 C
ATOM 7 C4' U B 7 -11.115 106.037 7.214 0.70 46.89 C
ATOM 8 O4' U B 7 -10.703 105.803 5.841 0.70 45.67 O
ATOM 9 C3' U B 7 -10.647 107.447 7.567 0.70 45.90 C
ATOM 10 O3' U B 7 -9.330 107.367 8.161 0.70 45.48 O
ATOM 11 C2' U B 7 -10.526 108.136 6.205 0.70 45.32 C
ATOM 12 O2' U B 7 -9.548 109.167 6.214 0.70 47.63 O
ATOM 13 C1' U B 7 -10.088 106.964 5.296 0.70 43.79 C
ATOM 14 N1 U B 7 -10.479 107.050 3.884 0.70 40.92 N
ATOM 15 C2 U B 7 -9.554 107.563 2.968 0.70 39.81 C
ATOM 16 O2 U B 7 -8.469 108.021 3.337 0.70 39.60 O
ATOM 17 N3 U B 7 -9.951 107.552 1.656 0.70 38.82 N
ATOM 18 C4 U B 7 -11.154 107.079 1.155 0.70 38.88 C
ATOM 19 O4 U B 7 -11.356 107.116 -0.075 0.70 39.29 O
ATOM 20 C5 U B 7 -12.070 106.587 2.142 0.70 38.30 C
ATOM 21 C6 U B 7 -11.712 106.582 3.440 0.70 39.47 C
ATOM 22 P A B 8 -9.171 107.122 9.751 0.70 43.19 P
ATOM 23 OP1 A B 8 -10.208 106.134 10.231 0.70 45.38 O
ATOM 24 OP2 A B 8 -9.053 108.442 10.441 0.70 43.78 O
ATOM 25 O5' A B 8 -7.714 106.474 9.848 0.70 42.99 O
TER
Atoms:
OP1: (-12.756,104.978,-5.241)
OP2: (-10.370,105.199,-4.268)
C3': (-13.425,103.857,-0.264)
C1': (-11.540,102.623,0.532)
C5': (-13.123,103.081,-2.686)
O4': (-11.774,102.266,-0.824)
C8: (-9.444,103.796,-0.358)
O2': (-13.577,102.603,1.843)
C6: (-7.738,104.864,2.560)
C5: (-8.529,104.378,1.473)
C4: (-9.694,103.703,1.826)
P: (-11.647,104.401,-4.435)
C4': (-13.103,102.718,-1.215)
C2': (-12.745,103.434,1.040)
C2: (-9.309,103.962,3.990)
N1: (-8.176,104.639,3.817)
N3: (-10.144,103.457,3.061)
N6: (-6.585,105.554,2.381)
N7: (-8.378,104.425,0.101)
N9: (-10.264,103.348,0.629)
O5': (-12.204,104.161,-2.959)
O3': (-14.832,103.892,-0.054)
OP2: (-10.370,105.199,-4.268)
C3': (-13.425,103.857,-0.264)
C1': (-11.540,102.623,0.532)
C5': (-13.123,103.081,-2.686)
O4': (-11.774,102.266,-0.824)
C8: (-9.444,103.796,-0.358)
O2': (-13.577,102.603,1.843)
C6: (-7.738,104.864,2.560)
C5: (-8.529,104.378,1.473)
C4: (-9.694,103.703,1.826)
P: (-11.647,104.401,-4.435)
C4': (-13.103,102.718,-1.215)
C2': (-12.745,103.434,1.040)
C2: (-9.309,103.962,3.990)
N1: (-8.176,104.639,3.817)
N3: (-10.144,103.457,3.061)
N6: (-6.585,105.554,2.381)
N7: (-8.378,104.425,0.101)
N9: (-10.264,103.348,0.629)
O5': (-12.204,104.161,-2.959)
O3': (-14.832,103.892,-0.054)
C4: (-11.154,107.079,1.155)
N3: (-9.951,107.552,1.656)
OP1: (-15.017,107.044,8.519)
OP2: (-15.301,108.448,6.298)
C2: (-9.554,107.563,2.968)
C1': (-10.088,106.964,5.296)
C3': (-10.647,107.447,7.567)
O5': (-13.364,106.808,6.619)
O4': (-10.703,105.803,5.841)
C5': (-12.613,105.801,7.338)
P: (-14.885,107.155,7.001)
C4': (-11.115,106.037,7.214)
C2': (-10.526,108.136,6.205)
O2': (-9.548,109.167,6.214)
N1: (-10.479,107.050,3.884)
O4: (-11.356,107.116,-0.075)
O2: (-8.469,108.021,3.337)
C6: (-11.712,106.582,3.440)
C5: (-12.070,106.587,2.142)
O3': (-9.330,107.367,8.161)
N3: (-9.951,107.552,1.656)
OP1: (-15.017,107.044,8.519)
OP2: (-15.301,108.448,6.298)
C2: (-9.554,107.563,2.968)
C1': (-10.088,106.964,5.296)
C3': (-10.647,107.447,7.567)
O5': (-13.364,106.808,6.619)
O4': (-10.703,105.803,5.841)
C5': (-12.613,105.801,7.338)
P: (-14.885,107.155,7.001)
C4': (-11.115,106.037,7.214)
C2': (-10.526,108.136,6.205)
O2': (-9.548,109.167,6.214)
N1: (-10.479,107.050,3.884)
O4: (-11.356,107.116,-0.075)
O2: (-8.469,108.021,3.337)
C6: (-11.712,106.582,3.440)
C5: (-12.070,106.587,2.142)
O3': (-9.330,107.367,8.161)
Image (generated by PyMOL):