ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1803:A1804

Extra

PDB:
ATOM 1 O3' C A1802 100.853 131.646 82.998 1.00 33.75 O
ATOM 2 P A A1803 102.446 131.696 82.940 1.00 33.54 P
ATOM 3 OP1 A A1803 102.932 130.943 81.759 1.00 33.95 O
ATOM 4 OP2 A A1803 102.933 131.328 84.293 1.00 34.17 O
ATOM 5 O5' A A1803 102.718 133.232 82.639 1.00 33.56 O
ATOM 6 C5' A A1803 102.217 133.810 81.420 1.00 34.31 C
ATOM 7 C4' A A1803 102.551 135.269 81.361 1.00 35.28 C
ATOM 8 O4' A A1803 101.868 135.995 82.406 1.00 34.67 O
ATOM 9 C3' A A1803 104.016 135.532 81.590 1.00 35.74 C
ATOM 10 O3' A A1803 104.685 135.434 80.346 1.00 37.57 O
ATOM 11 C2' A A1803 104.013 136.957 82.103 1.00 36.23 C
ATOM 12 O2' A A1803 103.928 137.871 81.020 1.00 35.78 O
ATOM 13 C1' A A1803 102.725 136.979 82.930 1.00 34.99 C
ATOM 14 N9 A A1803 102.868 136.711 84.363 1.00 36.35 N
ATOM 15 C8 A A1803 102.428 135.589 85.005 1.00 37.68 C
ATOM 16 N7 A A1803 102.566 135.627 86.304 1.00 37.27 N
ATOM 17 C5 A A1803 103.164 136.849 86.539 1.00 37.09 C
ATOM 18 C6 A A1803 103.555 137.494 87.727 1.00 38.10 C
ATOM 19 N6 A A1803 103.392 136.959 88.942 1.00 37.92 N
ATOM 20 N1 A A1803 104.124 138.718 87.620 1.00 37.76 N
ATOM 21 C2 A A1803 104.292 139.235 86.398 1.00 36.70 C
ATOM 22 N3 A A1803 103.970 138.722 85.213 1.00 36.96 N
ATOM 23 C4 A A1803 103.392 137.517 85.351 1.00 36.82 C
ATOM 24 P U A1804 106.185 134.910 80.306 1.00 38.89 P
ATOM 25 OP1 U A1804 106.639 134.862 78.893 1.00 39.05 O
ATOM 26 OP2 U A1804 106.233 133.688 81.141 1.00 37.48 O
ATOM 27 O5' U A1804 106.977 136.057 81.064 1.00 40.45 O
TER

ATOM 1 O3' A B1803 104.685 135.434 80.346 1.00 37.57 O
ATOM 2 P U B1804 106.185 134.910 80.306 1.00 38.89 P
ATOM 3 OP1 U B1804 106.639 134.862 78.893 1.00 39.05 O
ATOM 4 OP2 U B1804 106.233 133.688 81.141 1.00 37.48 O
ATOM 5 O5' U B1804 106.977 136.057 81.064 1.00 40.45 O
ATOM 6 C5' U B1804 107.062 137.382 80.525 1.00 40.21 C
ATOM 7 C4' U B1804 107.635 138.298 81.566 1.00 40.52 C
ATOM 8 O4' U B1804 106.807 138.225 82.754 1.00 41.12 O
ATOM 9 C3' U B1804 109.003 137.861 82.055 1.00 40.44 C
ATOM 10 O3' U B1804 110.003 138.387 81.183 1.00 40.76 O
ATOM 11 C2' U B1804 109.076 138.479 83.445 1.00 40.85 C
ATOM 12 O2' U B1804 109.445 139.835 83.347 1.00 41.79 O
ATOM 13 C1' U B1804 107.613 138.401 83.907 1.00 40.81 C
ATOM 14 N1 U B1804 107.234 137.369 84.887 1.00 40.23 N
ATOM 15 C2 U B1804 107.277 137.666 86.253 1.00 41.05 C
ATOM 16 O2 U B1804 107.681 138.715 86.703 1.00 42.24 O
ATOM 17 N3 U B1804 106.829 136.662 87.073 1.00 41.77 N
ATOM 18 C4 U B1804 106.367 135.408 86.685 1.00 43.15 C
ATOM 19 O4 U B1804 105.948 134.610 87.533 1.00 45.47 O
ATOM 20 C5 U B1804 106.394 135.178 85.281 1.00 42.37 C
ATOM 21 C6 U B1804 106.817 136.136 84.453 1.00 40.97 C
ATOM 22 P A B1805 110.896 137.392 80.288 1.00 42.57 P
ATOM 23 OP1 A B1805 110.702 137.686 78.843 1.00 39.71 O
ATOM 24 OP2 A B1805 110.627 136.031 80.791 1.00 42.39 O
ATOM 25 O5' A B1805 112.392 137.790 80.666 1.00 42.86 O
TER

Atoms:
OP1: (102.932,130.943,81.759)
OP2: (102.933,131.328,84.293)
C3': (104.016,135.532,81.590)
C1': (102.725,136.979,82.930)
C5': (102.217,133.810,81.420)
O4': (101.868,135.995,82.406)
C8: (102.428,135.589,85.005)
O2': (103.928,137.871,81.020)
C6: (103.555,137.494,87.727)
C5: (103.164,136.849,86.539)
C4: (103.392,137.517,85.351)
P: (102.446,131.696,82.940)
C4': (102.551,135.269,81.361)
C2': (104.013,136.957,82.103)
C2: (104.292,139.235,86.398)
N1: (104.124,138.718,87.620)
N3: (103.970,138.722,85.213)
N6: (103.392,136.959,88.942)
N7: (102.566,135.627,86.304)
N9: (102.868,136.711,84.363)
O5': (102.718,133.232,82.639)
O3': (104.685,135.434,80.346)
C4: (106.367,135.408,86.685)
N3: (106.829,136.662,87.073)
OP1: (106.639,134.862,78.893)
OP2: (106.233,133.688,81.141)
C2: (107.277,137.666,86.253)
C1': (107.613,138.401,83.907)
C3': (109.003,137.861,82.055)
O5': (106.977,136.057,81.064)
O4': (106.807,138.225,82.754)
C5': (107.062,137.382,80.525)
P: (106.185,134.910,80.306)
C4': (107.635,138.298,81.566)
C2': (109.076,138.479,83.445)
O2': (109.445,139.835,83.347)
N1: (107.234,137.369,84.887)
O4: (105.948,134.610,87.533)
O2: (107.681,138.715,86.703)
C6: (106.817,136.136,84.453)
C5: (106.394,135.178,85.281)
O3': (110.003,138.387,81.183)
Image (generated by PyMOL):
PyMOL image
show in jmol