Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2354:A2355
Extra
PDB:
ATOM 1 O3' U A2353 69.095 102.524 152.585 1.00 87.83 O
ATOM 2 P A A2354 68.640 103.205 153.962 1.00 84.20 P
ATOM 3 OP1 A A2354 69.084 102.313 155.064 1.00 83.69 O
ATOM 4 OP2 A A2354 67.200 103.556 153.835 1.00 83.80 O
ATOM 5 O5' A A2354 69.534 104.528 154.007 1.00 80.11 O
ATOM 6 C5' A A2354 68.963 105.813 154.313 1.00 74.65 C
ATOM 7 C4' A A2354 70.009 106.899 154.185 1.00 70.68 C
ATOM 8 O4' A A2354 71.154 106.557 155.006 1.00 69.50 O
ATOM 9 C3' A A2354 70.638 107.070 152.816 1.00 68.46 C
ATOM 10 O3' A A2354 69.844 107.813 151.921 1.00 65.49 O
ATOM 11 C2' A A2354 71.923 107.807 153.143 1.00 68.31 C
ATOM 12 O2' A A2354 71.682 109.166 153.446 1.00 68.69 O
ATOM 13 C1' A A2354 72.343 107.083 154.418 1.00 67.75 C
ATOM 14 N9 A A2354 73.285 105.982 154.186 1.00 65.64 N
ATOM 15 C8 A A2354 73.019 104.644 154.183 1.00 63.61 C
ATOM 16 N7 A A2354 74.076 103.896 154.004 1.00 62.86 N
ATOM 17 C5 A A2354 75.110 104.804 153.864 1.00 63.30 C
ATOM 18 C6 A A2354 76.484 104.640 153.657 1.00 63.65 C
ATOM 19 N6 A A2354 77.072 103.449 153.530 1.00 63.83 N
ATOM 20 N1 A A2354 77.246 105.753 153.573 1.00 63.61 N
ATOM 21 C2 A A2354 76.645 106.944 153.670 1.00 63.88 C
ATOM 22 N3 A A2354 75.359 107.223 153.855 1.00 64.39 N
ATOM 23 C4 A A2354 74.637 106.094 153.954 1.00 64.36 C
ATOM 24 P U A2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 25 OP1 U A2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 26 OP2 U A2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 27 O5' U A2355 71.290 107.357 149.914 1.00 61.99 O
TER
ATOM 1 O3' A B2354 69.844 107.813 151.921 1.00 65.49 O
ATOM 2 P U B2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 3 OP1 U B2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 4 OP2 U B2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 5 O5' U B2355 71.290 107.357 149.914 1.00 61.99 O
ATOM 6 C5' U B2355 72.025 108.586 149.737 1.00 60.20 C
ATOM 7 C4' U B2355 73.471 108.279 149.429 1.00 59.47 C
ATOM 8 O4' U B2355 74.048 107.489 150.504 1.00 58.59 O
ATOM 9 C3' U B2355 73.673 107.400 148.214 1.00 59.19 C
ATOM 10 O3' U B2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 11 C2' U B2355 75.041 106.789 148.477 1.00 58.53 C
ATOM 12 O2' U B2355 76.094 107.706 148.263 1.00 57.68 O
ATOM 13 C1' U B2355 74.940 106.519 149.971 1.00 57.88 C
ATOM 14 N1 U B2355 74.394 105.183 150.254 1.00 58.07 N
ATOM 15 C2 U B2355 75.260 104.101 150.259 1.00 58.51 C
ATOM 16 O2 U B2355 76.456 104.193 149.998 1.00 60.19 O
ATOM 17 N3 U B2355 74.670 102.900 150.569 1.00 57.29 N
ATOM 18 C4 U B2355 73.341 102.673 150.847 1.00 56.51 C
ATOM 19 O4 U B2355 72.965 101.535 151.121 1.00 55.48 O
ATOM 20 C5 U B2355 72.519 103.830 150.795 1.00 56.73 C
ATOM 21 C6 U B2355 73.057 105.012 150.511 1.00 57.87 C
ATOM 22 P C B2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 23 OP1 C B2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 24 OP2 C B2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 25 O5' C B2356 74.174 106.409 145.317 1.00 61.85 O
TER
ATOM 2 P A A2354 68.640 103.205 153.962 1.00 84.20 P
ATOM 3 OP1 A A2354 69.084 102.313 155.064 1.00 83.69 O
ATOM 4 OP2 A A2354 67.200 103.556 153.835 1.00 83.80 O
ATOM 5 O5' A A2354 69.534 104.528 154.007 1.00 80.11 O
ATOM 6 C5' A A2354 68.963 105.813 154.313 1.00 74.65 C
ATOM 7 C4' A A2354 70.009 106.899 154.185 1.00 70.68 C
ATOM 8 O4' A A2354 71.154 106.557 155.006 1.00 69.50 O
ATOM 9 C3' A A2354 70.638 107.070 152.816 1.00 68.46 C
ATOM 10 O3' A A2354 69.844 107.813 151.921 1.00 65.49 O
ATOM 11 C2' A A2354 71.923 107.807 153.143 1.00 68.31 C
ATOM 12 O2' A A2354 71.682 109.166 153.446 1.00 68.69 O
ATOM 13 C1' A A2354 72.343 107.083 154.418 1.00 67.75 C
ATOM 14 N9 A A2354 73.285 105.982 154.186 1.00 65.64 N
ATOM 15 C8 A A2354 73.019 104.644 154.183 1.00 63.61 C
ATOM 16 N7 A A2354 74.076 103.896 154.004 1.00 62.86 N
ATOM 17 C5 A A2354 75.110 104.804 153.864 1.00 63.30 C
ATOM 18 C6 A A2354 76.484 104.640 153.657 1.00 63.65 C
ATOM 19 N6 A A2354 77.072 103.449 153.530 1.00 63.83 N
ATOM 20 N1 A A2354 77.246 105.753 153.573 1.00 63.61 N
ATOM 21 C2 A A2354 76.645 106.944 153.670 1.00 63.88 C
ATOM 22 N3 A A2354 75.359 107.223 153.855 1.00 64.39 N
ATOM 23 C4 A A2354 74.637 106.094 153.954 1.00 64.36 C
ATOM 24 P U A2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 25 OP1 U A2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 26 OP2 U A2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 27 O5' U A2355 71.290 107.357 149.914 1.00 61.99 O
TER
ATOM 1 O3' A B2354 69.844 107.813 151.921 1.00 65.49 O
ATOM 2 P U B2355 69.772 107.345 150.401 1.00 63.09 P
ATOM 3 OP1 U B2355 68.981 108.352 149.656 1.00 64.97 O
ATOM 4 OP2 U B2355 69.340 105.927 150.413 1.00 63.40 O
ATOM 5 O5' U B2355 71.290 107.357 149.914 1.00 61.99 O
ATOM 6 C5' U B2355 72.025 108.586 149.737 1.00 60.20 C
ATOM 7 C4' U B2355 73.471 108.279 149.429 1.00 59.47 C
ATOM 8 O4' U B2355 74.048 107.489 150.504 1.00 58.59 O
ATOM 9 C3' U B2355 73.673 107.400 148.214 1.00 59.19 C
ATOM 10 O3' U B2355 73.615 108.150 147.018 1.00 60.95 O
ATOM 11 C2' U B2355 75.041 106.789 148.477 1.00 58.53 C
ATOM 12 O2' U B2355 76.094 107.706 148.263 1.00 57.68 O
ATOM 13 C1' U B2355 74.940 106.519 149.971 1.00 57.88 C
ATOM 14 N1 U B2355 74.394 105.183 150.254 1.00 58.07 N
ATOM 15 C2 U B2355 75.260 104.101 150.259 1.00 58.51 C
ATOM 16 O2 U B2355 76.456 104.193 149.998 1.00 60.19 O
ATOM 17 N3 U B2355 74.670 102.900 150.569 1.00 57.29 N
ATOM 18 C4 U B2355 73.341 102.673 150.847 1.00 56.51 C
ATOM 19 O4 U B2355 72.965 101.535 151.121 1.00 55.48 O
ATOM 20 C5 U B2355 72.519 103.830 150.795 1.00 56.73 C
ATOM 21 C6 U B2355 73.057 105.012 150.511 1.00 57.87 C
ATOM 22 P C B2356 73.038 107.466 145.694 1.00 61.54 P
ATOM 23 OP1 C B2356 73.014 108.549 144.676 1.00 61.63 O
ATOM 24 OP2 C B2356 71.779 106.741 146.031 1.00 60.58 O
ATOM 25 O5' C B2356 74.174 106.409 145.317 1.00 61.85 O
TER
Atoms:
OP1: (69.084,102.313,155.064)
OP2: (67.200,103.556,153.835)
C3': (70.638,107.070,152.816)
C1': (72.343,107.083,154.418)
C5': (68.963,105.813,154.313)
O4': (71.154,106.557,155.006)
C8: (73.019,104.644,154.183)
O2': (71.682,109.166,153.446)
C6: (76.484,104.640,153.657)
C5: (75.110,104.804,153.864)
C4: (74.637,106.094,153.954)
P: (68.640,103.205,153.962)
C4': (70.009,106.899,154.185)
C2': (71.923,107.807,153.143)
C2: (76.645,106.944,153.670)
N1: (77.246,105.753,153.573)
N3: (75.359,107.223,153.855)
N6: (77.072,103.449,153.530)
N7: (74.076,103.896,154.004)
N9: (73.285,105.982,154.186)
O5': (69.534,104.528,154.007)
O3': (69.844,107.813,151.921)
OP2: (67.200,103.556,153.835)
C3': (70.638,107.070,152.816)
C1': (72.343,107.083,154.418)
C5': (68.963,105.813,154.313)
O4': (71.154,106.557,155.006)
C8: (73.019,104.644,154.183)
O2': (71.682,109.166,153.446)
C6: (76.484,104.640,153.657)
C5: (75.110,104.804,153.864)
C4: (74.637,106.094,153.954)
P: (68.640,103.205,153.962)
C4': (70.009,106.899,154.185)
C2': (71.923,107.807,153.143)
C2: (76.645,106.944,153.670)
N1: (77.246,105.753,153.573)
N3: (75.359,107.223,153.855)
N6: (77.072,103.449,153.530)
N7: (74.076,103.896,154.004)
N9: (73.285,105.982,154.186)
O5': (69.534,104.528,154.007)
O3': (69.844,107.813,151.921)
C4: (73.341,102.673,150.847)
N3: (74.670,102.900,150.569)
OP1: (68.981,108.352,149.656)
OP2: (69.340,105.927,150.413)
C2: (75.260,104.101,150.259)
C1': (74.940,106.519,149.971)
C3': (73.673,107.400,148.214)
O5': (71.290,107.357,149.914)
O4': (74.048,107.489,150.504)
C5': (72.025,108.586,149.737)
P: (69.772,107.345,150.401)
C4': (73.471,108.279,149.429)
C2': (75.041,106.789,148.477)
O2': (76.094,107.706,148.263)
N1: (74.394,105.183,150.254)
O4: (72.965,101.535,151.121)
O2: (76.456,104.193,149.998)
C6: (73.057,105.012,150.511)
C5: (72.519,103.830,150.795)
O3': (73.615,108.150,147.018)
N3: (74.670,102.900,150.569)
OP1: (68.981,108.352,149.656)
OP2: (69.340,105.927,150.413)
C2: (75.260,104.101,150.259)
C1': (74.940,106.519,149.971)
C3': (73.673,107.400,148.214)
O5': (71.290,107.357,149.914)
O4': (74.048,107.489,150.504)
C5': (72.025,108.586,149.737)
P: (69.772,107.345,150.401)
C4': (73.471,108.279,149.429)
C2': (75.041,106.789,148.477)
O2': (76.094,107.706,148.263)
N1: (74.394,105.183,150.254)
O4: (72.965,101.535,151.121)
O2: (76.456,104.193,149.998)
C6: (73.057,105.012,150.511)
C5: (72.519,103.830,150.795)
O3': (73.615,108.150,147.018)
Image (generated by PyMOL):