ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1384:A1385

Extra

PDB:
ATOM 1 O3' C A1383 175.580 75.196 -7.970 1.00 80.29 O
ATOM 2 P A A1384 175.002 73.927 -8.771 1.00 83.45 P
ATOM 3 OP1 A A1384 174.030 73.244 -7.863 1.00 57.78 O
ATOM 4 OP2 A A1384 176.166 73.166 -9.311 1.00 57.78 O
ATOM 5 O5' A A1384 174.227 74.564 -10.010 1.00 83.45 O
ATOM 6 C5' A A1384 173.054 75.367 -9.807 1.00 83.45 C
ATOM 7 C4' A A1384 172.773 76.223 -11.023 1.00 83.45 C
ATOM 8 O4' A A1384 173.910 77.093 -11.274 1.00 83.45 O
ATOM 9 C3' A A1384 172.571 75.509 -12.349 1.00 83.45 C
ATOM 10 O3' A A1384 171.272 74.993 -12.524 1.00 83.45 O
ATOM 11 C2' A A1384 172.882 76.607 -13.352 1.00 83.45 C
ATOM 12 O2' A A1384 171.809 77.518 -13.502 1.00 83.45 O
ATOM 13 C1' A A1384 174.055 77.303 -12.671 1.00 83.45 C
ATOM 14 N9 A A1384 175.319 76.700 -13.105 1.00 57.78 N
ATOM 15 C8 A A1384 176.060 75.725 -12.483 1.00 57.78 C
ATOM 16 N7 A A1384 177.128 75.367 -13.151 1.00 57.78 N
ATOM 17 C5 A A1384 177.094 76.165 -14.284 1.00 57.78 C
ATOM 18 C6 A A1384 177.943 76.262 -15.395 1.00 57.78 C
ATOM 19 N6 A A1384 179.039 75.521 -15.554 1.00 57.78 N
ATOM 20 N1 A A1384 177.623 77.158 -16.355 1.00 57.78 N
ATOM 21 C2 A A1384 176.519 77.895 -16.199 1.00 57.78 C
ATOM 22 N3 A A1384 175.643 77.895 -15.203 1.00 57.78 N
ATOM 23 C4 A A1384 175.991 76.996 -14.266 1.00 57.78 C
ATOM 24 P U A1385 171.064 73.686 -13.435 1.00 78.27 P
ATOM 25 OP1 U A1385 169.605 73.398 -13.376 1.00 71.88 O
ATOM 26 OP2 U A1385 172.045 72.630 -13.062 1.00 71.88 O
ATOM 27 O5' U A1385 171.453 74.155 -14.905 1.00 78.27 O
TER

ATOM 1 O3' A B1384 171.272 74.993 -12.524 1.00 83.45 O
ATOM 2 P U B1385 171.064 73.686 -13.435 1.00 78.27 P
ATOM 3 OP1 U B1385 169.605 73.398 -13.376 1.00 71.88 O
ATOM 4 OP2 U B1385 172.045 72.630 -13.062 1.00 71.88 O
ATOM 5 O5' U B1385 171.453 74.155 -14.905 1.00 78.27 O
ATOM 6 C5' U B1385 170.726 75.202 -15.551 1.00 78.27 C
ATOM 7 C4' U B1385 171.420 75.617 -16.821 1.00 78.27 C
ATOM 8 O4' U B1385 172.791 76.003 -16.529 1.00 78.27 O
ATOM 9 C3' U B1385 171.579 74.563 -17.901 1.00 78.27 C
ATOM 10 O3' U B1385 170.394 74.378 -18.658 1.00 78.27 O
ATOM 11 C2' U B1385 172.716 75.135 -18.743 1.00 78.27 C
ATOM 12 O2' U B1385 172.304 76.116 -19.677 1.00 78.27 O
ATOM 13 C1' U B1385 173.593 75.792 -17.677 1.00 78.27 C
ATOM 14 N1 U B1385 174.736 74.930 -17.342 1.00 71.88 N
ATOM 15 C2 U B1385 175.788 74.911 -18.245 1.00 71.88 C
ATOM 16 O2 U B1385 175.826 75.627 -19.230 1.00 71.88 O
ATOM 17 N3 U B1385 176.793 74.027 -17.951 1.00 71.88 N
ATOM 18 C4 U B1385 176.868 73.187 -16.862 1.00 71.88 C
ATOM 19 O4 U B1385 177.782 72.358 -16.803 1.00 71.88 O
ATOM 20 C5 U B1385 175.769 73.301 -15.946 1.00 71.88 C
ATOM 21 C6 U B1385 174.764 74.149 -16.212 1.00 71.88 C
ATOM 22 P G B1386 170.246 73.084 -19.607 1.00 54.73 P
ATOM 23 OP1 G B1386 168.781 72.933 -19.838 1.00 56.31 O
ATOM 24 OP2 G B1386 171.024 71.932 -19.076 1.00 56.31 O
ATOM 25 O5' G B1386 170.922 73.541 -20.978 1.00 54.73 O
TER

Atoms:
OP1: (174.030,73.244,-7.863)
OP2: (176.166,73.166,-9.311)
C3': (172.571,75.509,-12.349)
C1': (174.055,77.303,-12.671)
C5': (173.054,75.367,-9.807)
O4': (173.910,77.093,-11.274)
C8: (176.060,75.725,-12.483)
O2': (171.809,77.518,-13.502)
C6: (177.943,76.262,-15.395)
C5: (177.094,76.165,-14.284)
C4: (175.991,76.996,-14.266)
P: (175.002,73.927,-8.771)
C4': (172.773,76.223,-11.023)
C2': (172.882,76.607,-13.352)
C2: (176.519,77.895,-16.199)
N1: (177.623,77.158,-16.355)
N3: (175.643,77.895,-15.203)
N6: (179.039,75.521,-15.554)
N7: (177.128,75.367,-13.151)
N9: (175.319,76.700,-13.105)
O5': (174.227,74.564,-10.010)
O3': (171.272,74.993,-12.524)
C4: (176.868,73.187,-16.862)
N3: (176.793,74.027,-17.951)
OP1: (169.605,73.398,-13.376)
OP2: (172.045,72.630,-13.062)
C2: (175.788,74.911,-18.245)
C1': (173.593,75.792,-17.677)
C3': (171.579,74.563,-17.901)
O5': (171.453,74.155,-14.905)
O4': (172.791,76.003,-16.529)
C5': (170.726,75.202,-15.551)
P: (171.064,73.686,-13.435)
C4': (171.420,75.617,-16.821)
C2': (172.716,75.135,-18.743)
O2': (172.304,76.116,-19.677)
N1: (174.736,74.930,-17.342)
O4: (177.782,72.358,-16.803)
O2: (175.826,75.627,-19.230)
C6: (174.764,74.149,-16.212)
C5: (175.769,73.301,-15.946)
O3': (170.394,74.378,-18.658)
Image (generated by PyMOL):
PyMOL image
show in jmol