Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:C6:C7
Extra
PDB:
ATOM 1 O3' G A 5 -3.628 -5.549 23.815 0.50 18.76 O
ATOM 2 P G A 6 -4.316 -4.982 25.147 1.00 21.24 P
ATOM 3 OP1 G A 6 -5.214 -6.053 25.629 1.00 25.25 O
ATOM 4 OP2 G A 6 -4.905 -3.654 24.864 1.00 21.88 O
ATOM 5 O5' G A 6 -3.114 -4.800 26.178 1.00 19.87 O
ATOM 6 C5' G A 6 -2.374 -5.894 26.659 1.00 20.68 C
ATOM 7 C4' G A 6 -1.407 -5.393 27.704 1.00 19.61 C
ATOM 8 O4' G A 6 -0.498 -4.464 27.076 1.00 18.85 O
ATOM 9 C3' G A 6 -2.021 -4.574 28.828 1.00 17.71 C
ATOM 10 O3' G A 6 -2.536 -5.437 29.814 1.00 17.37 O
ATOM 11 C2' G A 6 -0.792 -3.841 29.331 1.00 19.19 C
ATOM 12 O2' G A 6 0.128 -4.672 30.023 1.00 17.82 O
ATOM 13 C1' G A 6 -0.149 -3.457 28.015 1.00 20.85 C
ATOM 14 N9 G A 6 -0.504 -2.171 27.421 1.00 16.33 N
ATOM 15 C8 G A 6 -1.326 -1.939 26.347 1.00 18.37 C
ATOM 16 N7 G A 6 -1.428 -0.668 26.043 1.00 16.98 N
ATOM 17 C5 G A 6 -0.613 -0.027 26.970 1.00 16.11 C
ATOM 18 C6 G A 6 -0.311 1.340 27.152 1.00 18.49 C
ATOM 19 O6 G A 6 -0.713 2.304 26.474 1.00 16.70 O
ATOM 20 N1 G A 6 0.547 1.547 28.233 1.00 13.95 N
ATOM 21 C2 G A 6 1.054 0.550 29.029 1.00 17.27 C
ATOM 22 N2 G A 6 1.860 0.929 30.028 1.00 17.69 N
ATOM 23 N3 G A 6 0.778 -0.730 28.867 1.00 18.66 N
ATOM 24 C4 G A 6 -0.052 -0.939 27.831 1.00 15.73 C
ATOM 25 P C A 7 -3.753 -5.008 30.707 1.00 18.16 P
ATOM 26 OP1 C A 7 -4.145 -6.249 31.429 1.00 19.97 O
ATOM 27 OP2 C A 7 -4.780 -4.298 29.937 1.00 17.77 O
ATOM 28 O5' C A 7 -3.166 -3.940 31.742 1.00 16.35 O
TER
ATOM 1 O3' G B 6 -2.536 -5.437 29.814 1.00 17.37 O
ATOM 2 P C B 7 -3.753 -5.008 30.707 1.00 18.16 P
ATOM 3 OP1 C B 7 -4.145 -6.249 31.429 1.00 19.97 O
ATOM 4 OP2 C B 7 -4.780 -4.298 29.937 1.00 17.77 O
ATOM 5 O5' C B 7 -3.166 -3.940 31.742 1.00 16.35 O
ATOM 6 C5' C B 7 -2.288 -4.389 32.777 1.00 17.30 C
ATOM 7 C4' C B 7 -1.724 -3.175 33.485 1.00 15.63 C
ATOM 8 O4' C B 7 -0.920 -2.395 32.570 1.00 16.25 O
ATOM 9 C3' C B 7 -2.754 -2.172 33.988 1.00 14.16 C
ATOM 10 O3' C B 7 -3.401 -2.619 35.163 1.00 14.51 O
ATOM 11 C2' C B 7 -1.848 -0.973 34.204 1.00 14.75 C
ATOM 12 O2' C B 7 -0.999 -1.176 35.336 1.00 14.89 O
ATOM 13 C1' C B 7 -1.026 -1.017 32.926 1.00 15.80 C
ATOM 14 N1 C B 7 -1.622 -0.305 31.764 1.00 14.14 N
ATOM 15 C2 C B 7 -1.403 1.061 31.670 1.00 15.90 C
ATOM 16 O2 C B 7 -0.746 1.607 32.566 1.00 13.04 O
ATOM 17 N3 C B 7 -1.907 1.741 30.615 1.00 13.74 N
ATOM 18 C4 C B 7 -2.623 1.105 29.692 1.00 16.97 C
ATOM 19 N4 C B 7 -3.110 1.812 28.670 1.00 16.37 N
ATOM 20 C5 C B 7 -2.864 -0.300 29.766 1.00 17.19 C
ATOM 21 C6 C B 7 -2.342 -0.968 30.811 1.00 15.40 C
ATOM 22 P G B 8 -4.924 -2.354 35.418 1.00 15.81 P
ATOM 23 OP1 G B 8 -5.338 -3.173 36.574 1.00 17.31 O
ATOM 24 OP2 G B 8 -5.698 -2.501 34.160 1.00 17.28 O
ATOM 25 O5' G B 8 -5.003 -0.776 35.745 1.00 15.34 O
TER
ATOM 2 P G A 6 -4.316 -4.982 25.147 1.00 21.24 P
ATOM 3 OP1 G A 6 -5.214 -6.053 25.629 1.00 25.25 O
ATOM 4 OP2 G A 6 -4.905 -3.654 24.864 1.00 21.88 O
ATOM 5 O5' G A 6 -3.114 -4.800 26.178 1.00 19.87 O
ATOM 6 C5' G A 6 -2.374 -5.894 26.659 1.00 20.68 C
ATOM 7 C4' G A 6 -1.407 -5.393 27.704 1.00 19.61 C
ATOM 8 O4' G A 6 -0.498 -4.464 27.076 1.00 18.85 O
ATOM 9 C3' G A 6 -2.021 -4.574 28.828 1.00 17.71 C
ATOM 10 O3' G A 6 -2.536 -5.437 29.814 1.00 17.37 O
ATOM 11 C2' G A 6 -0.792 -3.841 29.331 1.00 19.19 C
ATOM 12 O2' G A 6 0.128 -4.672 30.023 1.00 17.82 O
ATOM 13 C1' G A 6 -0.149 -3.457 28.015 1.00 20.85 C
ATOM 14 N9 G A 6 -0.504 -2.171 27.421 1.00 16.33 N
ATOM 15 C8 G A 6 -1.326 -1.939 26.347 1.00 18.37 C
ATOM 16 N7 G A 6 -1.428 -0.668 26.043 1.00 16.98 N
ATOM 17 C5 G A 6 -0.613 -0.027 26.970 1.00 16.11 C
ATOM 18 C6 G A 6 -0.311 1.340 27.152 1.00 18.49 C
ATOM 19 O6 G A 6 -0.713 2.304 26.474 1.00 16.70 O
ATOM 20 N1 G A 6 0.547 1.547 28.233 1.00 13.95 N
ATOM 21 C2 G A 6 1.054 0.550 29.029 1.00 17.27 C
ATOM 22 N2 G A 6 1.860 0.929 30.028 1.00 17.69 N
ATOM 23 N3 G A 6 0.778 -0.730 28.867 1.00 18.66 N
ATOM 24 C4 G A 6 -0.052 -0.939 27.831 1.00 15.73 C
ATOM 25 P C A 7 -3.753 -5.008 30.707 1.00 18.16 P
ATOM 26 OP1 C A 7 -4.145 -6.249 31.429 1.00 19.97 O
ATOM 27 OP2 C A 7 -4.780 -4.298 29.937 1.00 17.77 O
ATOM 28 O5' C A 7 -3.166 -3.940 31.742 1.00 16.35 O
TER
ATOM 1 O3' G B 6 -2.536 -5.437 29.814 1.00 17.37 O
ATOM 2 P C B 7 -3.753 -5.008 30.707 1.00 18.16 P
ATOM 3 OP1 C B 7 -4.145 -6.249 31.429 1.00 19.97 O
ATOM 4 OP2 C B 7 -4.780 -4.298 29.937 1.00 17.77 O
ATOM 5 O5' C B 7 -3.166 -3.940 31.742 1.00 16.35 O
ATOM 6 C5' C B 7 -2.288 -4.389 32.777 1.00 17.30 C
ATOM 7 C4' C B 7 -1.724 -3.175 33.485 1.00 15.63 C
ATOM 8 O4' C B 7 -0.920 -2.395 32.570 1.00 16.25 O
ATOM 9 C3' C B 7 -2.754 -2.172 33.988 1.00 14.16 C
ATOM 10 O3' C B 7 -3.401 -2.619 35.163 1.00 14.51 O
ATOM 11 C2' C B 7 -1.848 -0.973 34.204 1.00 14.75 C
ATOM 12 O2' C B 7 -0.999 -1.176 35.336 1.00 14.89 O
ATOM 13 C1' C B 7 -1.026 -1.017 32.926 1.00 15.80 C
ATOM 14 N1 C B 7 -1.622 -0.305 31.764 1.00 14.14 N
ATOM 15 C2 C B 7 -1.403 1.061 31.670 1.00 15.90 C
ATOM 16 O2 C B 7 -0.746 1.607 32.566 1.00 13.04 O
ATOM 17 N3 C B 7 -1.907 1.741 30.615 1.00 13.74 N
ATOM 18 C4 C B 7 -2.623 1.105 29.692 1.00 16.97 C
ATOM 19 N4 C B 7 -3.110 1.812 28.670 1.00 16.37 N
ATOM 20 C5 C B 7 -2.864 -0.300 29.766 1.00 17.19 C
ATOM 21 C6 C B 7 -2.342 -0.968 30.811 1.00 15.40 C
ATOM 22 P G B 8 -4.924 -2.354 35.418 1.00 15.81 P
ATOM 23 OP1 G B 8 -5.338 -3.173 36.574 1.00 17.31 O
ATOM 24 OP2 G B 8 -5.698 -2.501 34.160 1.00 17.28 O
ATOM 25 O5' G B 8 -5.003 -0.776 35.745 1.00 15.34 O
TER
Atoms:
OP1: (-5.214,-6.053,25.629)
OP2: (-4.905,-3.654,24.864)
C3': (-2.021,-4.574,28.828)
C1': (-0.149,-3.457,28.015)
C5': (-2.374,-5.894,26.659)
O6: (-0.713,2.304,26.474)
O4': (-0.498,-4.464,27.076)
C8: (-1.326,-1.939,26.347)
C2: (1.054,0.550,29.029)
C6: (-0.311,1.340,27.152)
C5: (-0.613,-0.027,26.970)
C4: (-0.052,-0.939,27.831)
P: (-4.316,-4.982,25.147)
C4': (-1.407,-5.393,27.704)
C2': (-0.792,-3.841,29.331)
O2': (0.128,-4.672,30.023)
N1: (0.547,1.547,28.233)
N2: (1.860,0.929,30.028)
N3: (0.778,-0.730,28.867)
N7: (-1.428,-0.668,26.043)
N9: (-0.504,-2.171,27.421)
O5': (-3.114,-4.800,26.178)
O3': (-2.536,-5.437,29.814)
OP2: (-4.905,-3.654,24.864)
C3': (-2.021,-4.574,28.828)
C1': (-0.149,-3.457,28.015)
C5': (-2.374,-5.894,26.659)
O6: (-0.713,2.304,26.474)
O4': (-0.498,-4.464,27.076)
C8: (-1.326,-1.939,26.347)
C2: (1.054,0.550,29.029)
C6: (-0.311,1.340,27.152)
C5: (-0.613,-0.027,26.970)
C4: (-0.052,-0.939,27.831)
P: (-4.316,-4.982,25.147)
C4': (-1.407,-5.393,27.704)
C2': (-0.792,-3.841,29.331)
O2': (0.128,-4.672,30.023)
N1: (0.547,1.547,28.233)
N2: (1.860,0.929,30.028)
N3: (0.778,-0.730,28.867)
N7: (-1.428,-0.668,26.043)
N9: (-0.504,-2.171,27.421)
O5': (-3.114,-4.800,26.178)
O3': (-2.536,-5.437,29.814)
C2: (-1.403,1.061,31.670)
OP1: (-4.145,-6.249,31.429)
OP2: (-4.780,-4.298,29.937)
C4: (-2.623,1.105,29.692)
O5': (-3.166,-3.940,31.742)
C3': (-2.754,-2.172,33.988)
C1': (-1.026,-1.017,32.926)
O4': (-0.920,-2.395,32.570)
C5': (-2.288,-4.389,32.777)
P: (-3.753,-5.008,30.707)
O2: (-0.746,1.607,32.566)
C4': (-1.724,-3.175,33.485)
C2': (-1.848,-0.973,34.204)
O2': (-0.999,-1.176,35.336)
N1: (-1.622,-0.305,31.764)
N3: (-1.907,1.741,30.615)
N4: (-3.110,1.812,28.670)
C6: (-2.342,-0.968,30.811)
C5: (-2.864,-0.300,29.766)
O3': (-3.401,-2.619,35.163)
OP1: (-4.145,-6.249,31.429)
OP2: (-4.780,-4.298,29.937)
C4: (-2.623,1.105,29.692)
O5': (-3.166,-3.940,31.742)
C3': (-2.754,-2.172,33.988)
C1': (-1.026,-1.017,32.926)
O4': (-0.920,-2.395,32.570)
C5': (-2.288,-4.389,32.777)
P: (-3.753,-5.008,30.707)
O2: (-0.746,1.607,32.566)
C4': (-1.724,-3.175,33.485)
C2': (-1.848,-0.973,34.204)
O2': (-0.999,-1.176,35.336)
N1: (-1.622,-0.305,31.764)
N3: (-1.907,1.741,30.615)
N4: (-3.110,1.812,28.670)
C6: (-2.342,-0.968,30.811)
C5: (-2.864,-0.300,29.766)
O3': (-3.401,-2.619,35.163)
Image (generated by PyMOL):