ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A903:A904

Extra

PDB:
ATOM 1 O3' C A 902 54.123 86.471 87.659 1.00 21.48 O
ATOM 2 P A A 903 55.530 86.155 86.974 1.00 24.17 P
ATOM 3 OP1 A A 903 56.377 85.640 88.062 1.00 21.39 O
ATOM 4 OP2 A A 903 55.939 87.379 86.224 1.00 24.14 O
ATOM 5 O5' A A 903 55.227 84.973 85.947 1.00 21.58 O
ATOM 6 C5' A A 903 55.065 83.614 86.400 1.00 23.95 C
ATOM 7 C4' A A 903 55.069 82.673 85.224 1.00 23.82 C
ATOM 8 O4' A A 903 53.937 82.993 84.384 1.00 23.36 O
ATOM 9 C3' A A 903 56.273 82.808 84.309 1.00 25.79 C
ATOM 10 O3' A A 903 57.398 82.032 84.714 1.00 26.99 O
ATOM 11 C2' A A 903 55.729 82.363 82.964 1.00 25.46 C
ATOM 12 O2' A A 903 55.690 80.958 82.824 1.00 26.79 O
ATOM 13 C1' A A 903 54.317 82.936 83.025 1.00 24.56 C
ATOM 14 N9 A A 903 54.251 84.290 82.487 1.00 24.76 N
ATOM 15 C8 A A 903 54.186 85.493 83.156 1.00 25.07 C
ATOM 16 N7 A A 903 54.102 86.531 82.363 1.00 24.23 N
ATOM 17 C5 A A 903 54.120 85.976 81.090 1.00 24.01 C
ATOM 18 C6 A A 903 54.046 86.544 79.814 1.00 24.35 C
ATOM 19 N6 A A 903 53.906 87.853 79.597 1.00 24.59 N
ATOM 20 N1 A A 903 54.113 85.714 78.750 1.00 24.62 N
ATOM 21 C2 A A 903 54.227 84.402 78.968 1.00 26.48 C
ATOM 22 N3 A A 903 54.287 83.743 80.121 1.00 25.82 N
ATOM 23 C4 A A 903 54.228 84.601 81.155 1.00 24.94 C
ATOM 24 P U A 904 58.876 82.520 84.311 1.00 28.52 P
ATOM 25 OP1 U A 904 59.853 81.577 84.918 1.00 27.34 O
ATOM 26 OP2 U A 904 58.972 83.976 84.604 1.00 26.50 O
ATOM 27 O5' U A 904 58.937 82.298 82.735 1.00 25.72 O
TER

ATOM 1 O3' A B 903 57.398 82.032 84.714 1.00 26.99 O
ATOM 2 P U B 904 58.876 82.520 84.311 1.00 28.52 P
ATOM 3 OP1 U B 904 59.853 81.577 84.918 1.00 27.34 O
ATOM 4 OP2 U B 904 58.972 83.976 84.604 1.00 26.50 O
ATOM 5 O5' U B 904 58.937 82.298 82.735 1.00 25.72 O
ATOM 6 C5' U B 904 59.105 80.970 82.221 1.00 25.06 C
ATOM 7 C4' U B 904 59.335 80.978 80.731 1.00 23.78 C
ATOM 8 O4' U B 904 58.118 81.356 80.038 1.00 22.53 O
ATOM 9 C3' U B 904 60.411 81.886 80.154 1.00 21.60 C
ATOM 10 O3' U B 904 61.718 81.343 80.253 1.00 21.55 O
ATOM 11 C2' U B 904 59.952 81.975 78.711 1.00 22.06 C
ATOM 12 O2' U B 904 60.173 80.753 78.029 1.00 18.77 O
ATOM 13 C1' U B 904 58.450 82.143 78.915 1.00 20.66 C
ATOM 14 N1 U B 904 58.081 83.531 79.222 1.00 20.07 N
ATOM 15 C2 U B 904 57.873 84.378 78.159 1.00 20.40 C
ATOM 16 O2 U B 904 58.049 84.044 77.002 1.00 21.66 O
ATOM 17 N3 U B 904 57.464 85.641 78.497 1.00 22.43 N
ATOM 18 C4 U B 904 57.276 86.145 79.762 1.00 23.00 C
ATOM 19 O4 U B 904 56.908 87.309 79.897 1.00 22.96 O
ATOM 20 C5 U B 904 57.545 85.221 80.820 1.00 22.19 C
ATOM 21 C6 U B 904 57.928 83.974 80.523 1.00 18.96 C
ATOM 22 P G B 905 62.979 82.328 80.405 1.00 22.90 P
ATOM 23 OP1 G B 905 64.203 81.499 80.531 1.00 20.09 O
ATOM 24 OP2 G B 905 62.676 83.352 81.424 1.00 22.75 O
ATOM 25 O5' G B 905 63.061 83.060 79.001 1.00 20.55 O
TER

Atoms:
OP1: (56.377,85.640,88.062)
OP2: (55.939,87.379,86.224)
C3': (56.273,82.808,84.309)
C1': (54.317,82.936,83.025)
C5': (55.065,83.614,86.400)
O4': (53.937,82.993,84.384)
C8: (54.186,85.493,83.156)
O2': (55.690,80.958,82.824)
C6: (54.046,86.544,79.814)
C5: (54.120,85.976,81.090)
C4: (54.228,84.601,81.155)
P: (55.530,86.155,86.974)
C4': (55.069,82.673,85.224)
C2': (55.729,82.363,82.964)
C2: (54.227,84.402,78.968)
N1: (54.113,85.714,78.750)
N3: (54.287,83.743,80.121)
N6: (53.906,87.853,79.597)
N7: (54.102,86.531,82.363)
N9: (54.251,84.290,82.487)
O5': (55.227,84.973,85.947)
O3': (57.398,82.032,84.714)
C4: (57.276,86.145,79.762)
N3: (57.464,85.641,78.497)
OP1: (59.853,81.577,84.918)
OP2: (58.972,83.976,84.604)
C2: (57.873,84.378,78.159)
C1': (58.450,82.143,78.915)
C3': (60.411,81.886,80.154)
O5': (58.937,82.298,82.735)
O4': (58.118,81.356,80.038)
C5': (59.105,80.970,82.221)
P: (58.876,82.520,84.311)
C4': (59.335,80.978,80.731)
C2': (59.952,81.975,78.711)
O2': (60.173,80.753,78.029)
N1: (58.081,83.531,79.222)
O4: (56.908,87.309,79.897)
O2: (58.049,84.044,77.002)
C6: (57.928,83.974,80.523)
C5: (57.545,85.221,80.820)
O3': (61.718,81.343,80.253)
Image (generated by PyMOL):
PyMOL image
show in jmol