ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51516:51517

Extra

PDB:
ATOM 1 O3' G A1515 174.516 -2.662 128.707 1.00288.49 O
ATOM 2 P A A1516 173.837 -3.075 127.298 1.00345.88 P
ATOM 3 OP1 A A1516 174.932 -3.214 126.308 1.00346.33 O
ATOM 4 OP2 A A1516 172.755 -2.091 127.030 1.00346.17 O
ATOM 5 O5' A A1516 173.206 -4.508 127.610 1.00345.58 O
ATOM 6 C5' A A1516 173.340 -5.603 126.702 1.00345.92 C
ATOM 7 C4' A A1516 172.754 -6.868 127.292 1.00345.50 C
ATOM 8 O4' A A1516 172.522 -6.652 128.713 1.00344.81 O
ATOM 9 C3' A A1516 171.393 -7.305 126.732 1.00345.78 C
ATOM 10 O3' A A1516 171.496 -8.205 125.630 1.00346.24 O
ATOM 11 C2' A A1516 170.690 -7.912 127.940 1.00345.13 C
ATOM 12 O2' A A1516 171.135 -9.245 128.162 1.00344.85 O
ATOM 13 C1' A A1516 171.218 -7.041 129.064 1.00344.63 C
ATOM 14 N9 A A1516 170.409 -5.812 129.264 1.00344.70 N
ATOM 15 C8 A A1516 170.935 -4.545 129.343 1.00344.78 C
ATOM 16 N7 A A1516 170.075 -3.582 129.543 1.00344.82 N
ATOM 17 C5 A A1516 168.870 -4.255 129.611 1.00344.76 C
ATOM 18 C6 A A1516 167.567 -3.773 129.805 1.00344.76 C
ATOM 19 N6 A A1516 167.294 -2.479 129.971 1.00344.84 N
ATOM 20 N1 A A1516 166.561 -4.670 129.821 1.00344.69 N
ATOM 21 C2 A A1516 166.872 -5.962 129.652 1.00344.62 C
ATOM 22 N3 A A1516 168.062 -6.541 129.459 1.00344.61 N
ATOM 23 C4 A A1516 169.047 -5.625 129.449 1.00344.68 C
ATOM 24 P U A1517 170.712 -7.910 124.248 1.00307.51 P
ATOM 25 OP1 U A1517 171.593 -8.369 123.144 1.00307.99 O
ATOM 26 OP2 U A1517 170.301 -6.487 124.278 1.00307.67 O
ATOM 27 O5' U A1517 169.419 -8.853 124.332 1.00307.41 O
TER

ATOM 1 O3' A B1516 171.496 -8.205 125.630 1.00346.24 O
ATOM 2 P U B1517 170.712 -7.910 124.248 1.00307.51 P
ATOM 3 OP1 U B1517 171.593 -8.369 123.144 1.00307.99 O
ATOM 4 OP2 U B1517 170.301 -6.487 124.278 1.00307.67 O
ATOM 5 O5' U B1517 169.419 -8.853 124.332 1.00307.41 O
ATOM 6 C5' U B1517 168.645 -8.952 125.521 1.00306.82 C
ATOM 7 C4' U B1517 167.313 -8.249 125.396 1.00307.01 C
ATOM 8 O4' U B1517 167.107 -7.377 126.543 1.00306.53 O
ATOM 9 C3' U B1517 167.146 -7.312 124.211 1.00307.73 C
ATOM 10 O3' U B1517 166.894 -7.980 122.985 1.00308.29 O
ATOM 11 C2' U B1517 166.003 -6.419 124.675 1.00307.64 C
ATOM 12 O2' U B1517 164.763 -7.103 124.588 1.00307.66 O
ATOM 13 C1' U B1517 166.354 -6.242 126.151 1.00306.89 C
ATOM 14 N1 U B1517 167.161 -5.009 126.386 1.00306.88 N
ATOM 15 C2 U B1517 166.479 -3.843 126.704 1.00306.88 C
ATOM 16 O2 U B1517 165.264 -3.798 126.823 1.00306.87 O
ATOM 17 N3 U B1517 167.273 -2.730 126.894 1.00306.88 N
ATOM 18 C4 U B1517 168.650 -2.645 126.793 1.00306.88 C
ATOM 19 O4 U B1517 169.224 -1.570 126.993 1.00306.88 O
ATOM 20 C5 U B1517 169.280 -3.881 126.446 1.00306.89 C
ATOM 21 C6 U B1517 168.535 -4.981 126.262 1.00306.89 C
ATOM 22 P U B1518 167.450 -7.364 121.600 1.00240.74 P
ATOM 23 OP1 U B1518 167.411 -8.453 120.589 1.00241.14 O
ATOM 24 OP2 U B1518 168.751 -6.716 121.900 1.00240.61 O
ATOM 25 O5' U B1518 166.362 -6.252 121.242 1.00241.10 O
TER

Atoms:
OP1: (174.932,-3.214,126.308)
OP2: (172.755,-2.091,127.030)
C3': (171.393,-7.305,126.732)
C1': (171.218,-7.041,129.064)
C5': (173.340,-5.603,126.702)
O4': (172.522,-6.652,128.713)
C8: (170.935,-4.545,129.343)
O2': (171.135,-9.245,128.162)
C6: (167.567,-3.773,129.805)
C5: (168.870,-4.255,129.611)
C4: (169.047,-5.625,129.449)
P: (173.837,-3.075,127.298)
C4': (172.754,-6.868,127.292)
C2': (170.690,-7.912,127.940)
C2: (166.872,-5.962,129.652)
N1: (166.561,-4.670,129.821)
N3: (168.062,-6.541,129.459)
N6: (167.294,-2.479,129.971)
N7: (170.075,-3.582,129.543)
N9: (170.409,-5.812,129.264)
O5': (173.206,-4.508,127.610)
O3': (171.496,-8.205,125.630)
C4: (168.650,-2.645,126.793)
N3: (167.273,-2.730,126.894)
OP1: (171.593,-8.369,123.144)
OP2: (170.301,-6.487,124.278)
C2: (166.479,-3.843,126.704)
C1': (166.354,-6.242,126.151)
C3': (167.146,-7.312,124.211)
O5': (169.419,-8.853,124.332)
O4': (167.107,-7.377,126.543)
C5': (168.645,-8.952,125.521)
P: (170.712,-7.910,124.248)
C4': (167.313,-8.249,125.396)
C2': (166.003,-6.419,124.675)
O2': (164.763,-7.103,124.588)
N1: (167.161,-5.009,126.386)
O4: (169.224,-1.570,126.993)
O2: (165.264,-3.798,126.823)
C6: (168.535,-4.981,126.262)
C5: (169.280,-3.881,126.446)
O3': (166.894,-7.980,122.985)
Image (generated by PyMOL):
PyMOL image
show in jmol