Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A476:A477
Extra
PDB:
ATOM 1 O3' C A 475 -18.903 -5.542 102.374 1.00 46.87 O
ATOM 2 P A A 476 -20.088 -4.463 102.344 1.00 56.10 P
ATOM 3 OP1 A A 476 -21.214 -5.059 101.579 1.00 56.10 O
ATOM 4 OP2 A A 476 -19.505 -3.190 101.865 1.00 56.10 O
ATOM 5 O5' A A 476 -20.477 -4.336 103.880 1.00 56.10 O
ATOM 6 C5' A A 476 -21.436 -3.383 104.307 1.00 56.10 C
ATOM 7 C4' A A 476 -20.971 -2.634 105.528 1.00 56.10 C
ATOM 8 O4' A A 476 -19.524 -2.534 105.530 1.00 56.10 O
ATOM 9 C3' A A 476 -21.434 -1.197 105.628 1.00 56.10 C
ATOM 10 O3' A A 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 11 C2' A A 476 -20.404 -0.571 106.552 1.00 56.10 C
ATOM 12 O2' A A 476 -20.698 -0.862 107.911 1.00 56.10 O
ATOM 13 C1' A A 476 -19.129 -1.321 106.142 1.00 56.10 C
ATOM 14 N9 A A 476 -18.305 -0.551 105.181 1.00 55.25 N
ATOM 15 C8 A A 476 -18.166 -0.789 103.836 1.00 55.25 C
ATOM 16 N7 A A 476 -17.364 0.050 103.232 1.00 55.25 N
ATOM 17 C5 A A 476 -16.945 0.897 104.245 1.00 55.25 C
ATOM 18 C6 A A 476 -16.078 1.993 104.243 1.00 55.25 C
ATOM 19 N6 A A 476 -15.463 2.435 103.141 1.00 55.25 N
ATOM 20 N1 A A 476 -15.859 2.622 105.417 1.00 55.25 N
ATOM 21 C2 A A 476 -16.476 2.171 106.508 1.00 55.25 C
ATOM 22 N3 A A 476 -17.312 1.149 106.632 1.00 55.25 N
ATOM 23 C4 A A 476 -17.507 0.543 105.451 1.00 55.25 C
ATOM 24 P U A 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 25 OP1 U A 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 26 OP2 U A 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 27 O5' U A 477 -23.196 0.654 104.351 1.00 51.38 O
TER
ATOM 1 O3' A B 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 2 P U B 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 3 OP1 U B 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 4 OP2 U B 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 5 O5' U B 477 -23.196 0.654 104.351 1.00 51.38 O
ATOM 6 C5' U B 477 -23.643 1.982 104.583 1.00 51.38 C
ATOM 7 C4' U B 477 -22.810 2.695 105.633 1.00 51.38 C
ATOM 8 O4' U B 477 -21.410 2.323 105.525 1.00 51.38 O
ATOM 9 C3' U B 477 -22.803 4.208 105.533 1.00 51.38 C
ATOM 10 O3' U B 477 -23.955 4.793 106.113 1.00 51.38 O
ATOM 11 C2' U B 477 -21.497 4.599 106.215 1.00 51.38 C
ATOM 12 O2' U B 477 -21.654 4.651 107.618 1.00 51.38 O
ATOM 13 C1' U B 477 -20.590 3.422 105.865 1.00 51.38 C
ATOM 14 N1 U B 477 -19.704 3.726 104.723 1.00 50.84 N
ATOM 15 C2 U B 477 -18.567 4.455 104.990 1.00 50.84 C
ATOM 16 O2 U B 477 -18.287 4.854 106.099 1.00 50.84 O
ATOM 17 N3 U B 477 -17.771 4.711 103.907 1.00 50.84 N
ATOM 18 C4 U B 477 -17.984 4.324 102.600 1.00 50.84 C
ATOM 19 O4 U B 477 -17.161 4.638 101.737 1.00 50.84 O
ATOM 20 C5 U B 477 -19.182 3.573 102.394 1.00 50.84 C
ATOM 21 C6 U B 477 -19.977 3.310 103.440 1.00 50.84 C
ATOM 22 P U B 478 -24.621 6.089 105.443 1.00 36.22 P
ATOM 23 OP1 U B 478 -25.871 6.388 106.204 1.00 36.22 O
ATOM 24 OP2 U B 478 -24.713 5.838 103.977 1.00 36.22 O
ATOM 25 O5' U B 478 -23.528 7.195 105.727 1.00 36.22 O
TER
ATOM 2 P A A 476 -20.088 -4.463 102.344 1.00 56.10 P
ATOM 3 OP1 A A 476 -21.214 -5.059 101.579 1.00 56.10 O
ATOM 4 OP2 A A 476 -19.505 -3.190 101.865 1.00 56.10 O
ATOM 5 O5' A A 476 -20.477 -4.336 103.880 1.00 56.10 O
ATOM 6 C5' A A 476 -21.436 -3.383 104.307 1.00 56.10 C
ATOM 7 C4' A A 476 -20.971 -2.634 105.528 1.00 56.10 C
ATOM 8 O4' A A 476 -19.524 -2.534 105.530 1.00 56.10 O
ATOM 9 C3' A A 476 -21.434 -1.197 105.628 1.00 56.10 C
ATOM 10 O3' A A 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 11 C2' A A 476 -20.404 -0.571 106.552 1.00 56.10 C
ATOM 12 O2' A A 476 -20.698 -0.862 107.911 1.00 56.10 O
ATOM 13 C1' A A 476 -19.129 -1.321 106.142 1.00 56.10 C
ATOM 14 N9 A A 476 -18.305 -0.551 105.181 1.00 55.25 N
ATOM 15 C8 A A 476 -18.166 -0.789 103.836 1.00 55.25 C
ATOM 16 N7 A A 476 -17.364 0.050 103.232 1.00 55.25 N
ATOM 17 C5 A A 476 -16.945 0.897 104.245 1.00 55.25 C
ATOM 18 C6 A A 476 -16.078 1.993 104.243 1.00 55.25 C
ATOM 19 N6 A A 476 -15.463 2.435 103.141 1.00 55.25 N
ATOM 20 N1 A A 476 -15.859 2.622 105.417 1.00 55.25 N
ATOM 21 C2 A A 476 -16.476 2.171 106.508 1.00 55.25 C
ATOM 22 N3 A A 476 -17.312 1.149 106.632 1.00 55.25 N
ATOM 23 C4 A A 476 -17.507 0.543 105.451 1.00 55.25 C
ATOM 24 P U A 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 25 OP1 U A 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 26 OP2 U A 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 27 O5' U A 477 -23.196 0.654 104.351 1.00 51.38 O
TER
ATOM 1 O3' A B 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 2 P U B 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 3 OP1 U B 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 4 OP2 U B 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 5 O5' U B 477 -23.196 0.654 104.351 1.00 51.38 O
ATOM 6 C5' U B 477 -23.643 1.982 104.583 1.00 51.38 C
ATOM 7 C4' U B 477 -22.810 2.695 105.633 1.00 51.38 C
ATOM 8 O4' U B 477 -21.410 2.323 105.525 1.00 51.38 O
ATOM 9 C3' U B 477 -22.803 4.208 105.533 1.00 51.38 C
ATOM 10 O3' U B 477 -23.955 4.793 106.113 1.00 51.38 O
ATOM 11 C2' U B 477 -21.497 4.599 106.215 1.00 51.38 C
ATOM 12 O2' U B 477 -21.654 4.651 107.618 1.00 51.38 O
ATOM 13 C1' U B 477 -20.590 3.422 105.865 1.00 51.38 C
ATOM 14 N1 U B 477 -19.704 3.726 104.723 1.00 50.84 N
ATOM 15 C2 U B 477 -18.567 4.455 104.990 1.00 50.84 C
ATOM 16 O2 U B 477 -18.287 4.854 106.099 1.00 50.84 O
ATOM 17 N3 U B 477 -17.771 4.711 103.907 1.00 50.84 N
ATOM 18 C4 U B 477 -17.984 4.324 102.600 1.00 50.84 C
ATOM 19 O4 U B 477 -17.161 4.638 101.737 1.00 50.84 O
ATOM 20 C5 U B 477 -19.182 3.573 102.394 1.00 50.84 C
ATOM 21 C6 U B 477 -19.977 3.310 103.440 1.00 50.84 C
ATOM 22 P U B 478 -24.621 6.089 105.443 1.00 36.22 P
ATOM 23 OP1 U B 478 -25.871 6.388 106.204 1.00 36.22 O
ATOM 24 OP2 U B 478 -24.713 5.838 103.977 1.00 36.22 O
ATOM 25 O5' U B 478 -23.528 7.195 105.727 1.00 36.22 O
TER
Atoms:
OP1: (-21.214,-5.059,101.579)
OP2: (-19.505,-3.190,101.865)
C3': (-21.434,-1.197,105.628)
C1': (-19.129,-1.321,106.142)
C5': (-21.436,-3.383,104.307)
O4': (-19.524,-2.534,105.530)
C8: (-18.166,-0.789,103.836)
O2': (-20.698,-0.862,107.911)
C6: (-16.078,1.993,104.243)
C5: (-16.945,0.897,104.245)
C4: (-17.507,0.543,105.451)
P: (-20.088,-4.463,102.344)
C4': (-20.971,-2.634,105.528)
C2': (-20.404,-0.571,106.552)
C2: (-16.476,2.171,106.508)
N1: (-15.859,2.622,105.417)
N3: (-17.312,1.149,106.632)
N6: (-15.463,2.435,103.141)
N7: (-17.364,0.050,103.232)
N9: (-18.305,-0.551,105.181)
O5': (-20.477,-4.336,103.880)
O3': (-22.761,-1.078,106.086)
OP2: (-19.505,-3.190,101.865)
C3': (-21.434,-1.197,105.628)
C1': (-19.129,-1.321,106.142)
C5': (-21.436,-3.383,104.307)
O4': (-19.524,-2.534,105.530)
C8: (-18.166,-0.789,103.836)
O2': (-20.698,-0.862,107.911)
C6: (-16.078,1.993,104.243)
C5: (-16.945,0.897,104.245)
C4: (-17.507,0.543,105.451)
P: (-20.088,-4.463,102.344)
C4': (-20.971,-2.634,105.528)
C2': (-20.404,-0.571,106.552)
C2: (-16.476,2.171,106.508)
N1: (-15.859,2.622,105.417)
N3: (-17.312,1.149,106.632)
N6: (-15.463,2.435,103.141)
N7: (-17.364,0.050,103.232)
N9: (-18.305,-0.551,105.181)
O5': (-20.477,-4.336,103.880)
O3': (-22.761,-1.078,106.086)
C4: (-17.984,4.324,102.600)
N3: (-17.771,4.711,103.907)
OP1: (-25.060,-0.120,105.880)
OP2: (-24.105,-1.689,104.086)
C2: (-18.567,4.455,104.990)
C1': (-20.590,3.422,105.865)
C3': (-22.803,4.208,105.533)
O5': (-23.196,0.654,104.351)
O4': (-21.410,2.323,105.525)
C5': (-23.643,1.982,104.583)
P: (-23.898,-0.587,105.067)
C4': (-22.810,2.695,105.633)
C2': (-21.497,4.599,106.215)
O2': (-21.654,4.651,107.618)
N1: (-19.704,3.726,104.723)
O4: (-17.161,4.638,101.737)
O2: (-18.287,4.854,106.099)
C6: (-19.977,3.310,103.440)
C5: (-19.182,3.573,102.394)
O3': (-23.955,4.793,106.113)
N3: (-17.771,4.711,103.907)
OP1: (-25.060,-0.120,105.880)
OP2: (-24.105,-1.689,104.086)
C2: (-18.567,4.455,104.990)
C1': (-20.590,3.422,105.865)
C3': (-22.803,4.208,105.533)
O5': (-23.196,0.654,104.351)
O4': (-21.410,2.323,105.525)
C5': (-23.643,1.982,104.583)
P: (-23.898,-0.587,105.067)
C4': (-22.810,2.695,105.633)
C2': (-21.497,4.599,106.215)
O2': (-21.654,4.651,107.618)
N1: (-19.704,3.726,104.723)
O4: (-17.161,4.638,101.737)
O2: (-18.287,4.854,106.099)
C6: (-19.977,3.310,103.440)
C5: (-19.182,3.573,102.394)
O3': (-23.955,4.793,106.113)
Image (generated by PyMOL):